RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 MORN1Q5T089 497 aa15.59■□□□□ 0.09
PRKDC-206ENST00000536429 AKNAD1Q5T1N1 836 aa15.59■□□□□ 0.09
PRKDC-206ENST00000536429 PLEKHH3Q7Z736 793 aa15.59■□□□□ 0.09
PRKDC-206ENST00000536429 STAG1Q8WVM7 1258 aa15.59■□□□□ 0.09
PRKDC-206ENST00000536429 USP6NLQ92738 828 aa15.59■□□□□ 0.09
PRKDC-206ENST00000536429 SPATC1LQ9H0A9 340 aa15.59■□□□□ 0.09
PRKDC-206ENST00000536429 BIN2Q9UBW5 565 aaPredicted RBP15.59■□□□□ 0.09
PRKDC-206ENST00000536429 PPP1R9AQ9ULJ8 1098 aa15.59■□□□□ 0.09
PRKDC-206ENST00000536429 STX8Q9UNK0 236 aa15.59■□□□□ 0.09
PRKDC-206ENST00000536429 RLFQ13129 1914 aa15.58■□□□□ 0.09
PRKDC-206ENST00000536429 INHAP05111 366 aa15.58■□□□□ 0.08
PRKDC-206ENST00000536429 NOVP48745 357 aa15.58■□□□□ 0.08
PRKDC-206ENST00000536429 PTH1RQ03431 593 aa15.58■□□□□ 0.08
PRKDC-206ENST00000536429 WDR78Q5VTH9 848 aa15.58■□□□□ 0.08
PRKDC-206ENST00000536429 SLFN13Q68D06 897 aa15.58■□□□□ 0.08
PRKDC-206ENST00000536429 CCAR1Q8IX12 1150 aaKnown RBP15.58■□□□□ 0.08
PRKDC-206ENST00000536429 GMCL1P1Q8NEA9 526 aa15.58■□□□□ 0.08
PRKDC-206ENST00000536429 REPS2Q8NFH8 660 aa15.58■□□□□ 0.08
PRKDC-206ENST00000536429 PXYLP1Q8TE99 480 aa15.58■□□□□ 0.08
PRKDC-206ENST00000536429 ADAMTS5Q9UNA0 930 aa15.58■□□□□ 0.08
PRKDC-206ENST00000536429 VWA5AO00534 786 aa15.57■□□□□ 0.08
PRKDC-206ENST00000536429 ZNF213O14771 459 aa15.57■□□□□ 0.08
PRKDC-206ENST00000536429 TNRC18O15417 2968 aaPredicted RBP15.57■□□□□ 0.08
PRKDC-206ENST00000536429 CCL5P13501 91 aa15.57■□□□□ 0.08
PRKDC-206ENST00000536429 ERCC3P19447 782 aa15.57■□□□□ 0.08
PRKDC-206ENST00000536429 CCNA1P78396 465 aa15.57■□□□□ 0.08
PRKDC-206ENST00000536429 MLLT1Q03111 559 aaPredicted RBP15.57■□□□□ 0.08
PRKDC-206ENST00000536429 PLS1Q14651 629 aa15.57■□□□□ 0.08
PRKDC-206ENST00000536429 CCL14Q16627 93 aa15.57■□□□□ 0.08
PRKDC-206ENST00000536429 MFSD6Q6ZSS7 791 aa15.57■□□□□ 0.08
PRKDC-206ENST00000536429 TRIB2Q92519 343 aa15.57■□□□□ 0.08
PRKDC-206ENST00000536429 CCDC136Q96JN2 1154 aa15.57■□□□□ 0.08
PRKDC-206ENST00000536429 NUDT12Q9BQG2 462 aa15.57■□□□□ 0.08
PRKDC-206ENST00000536429 UNC93B1Q9H1C4 597 aa15.57■□□□□ 0.08
PRKDC-206ENST00000536429 RAD50Q92878 1312 aa15.57■□□□□ 0.08
PRKDC-206ENST00000536429 SGSM2O43147 1006 aa15.56■□□□□ 0.08
PRKDC-206ENST00000536429 PTPREP23469 700 aa15.56■□□□□ 0.08
PRKDC-206ENST00000536429 MCCP23508 829 aa15.56■□□□□ 0.08
PRKDC-206ENST00000536429 MB21D1Q8N884 522 aa15.56■□□□□ 0.08
PRKDC-206ENST00000536429 SOCS4Q8WXH5 440 aa15.56■□□□□ 0.08
PRKDC-206ENST00000536429 SLF1Q9BQI6 1058 aa15.56■□□□□ 0.08
PRKDC-206ENST00000536429 TMEM106CQ9BVX2 250 aa15.56■□□□□ 0.08
PRKDC-206ENST00000536429 CWC22Q9HCG8 908 aaKnown RBP15.56■□□□□ 0.08
PRKDC-206ENST00000536429 SYNPO2Q9UMS6 1093 aa15.56■□□□□ 0.08
PRKDC-206ENST00000536429 MTMR7Q9Y216 660 aa15.56■□□□□ 0.08
PRKDC-206ENST00000536429 TAF6LQ9Y6J9 622 aa15.56■□□□□ 0.08
PRKDC-206ENST00000536429 A0A0G2JMZ2 1700 aa15.56■□□□□ 0.08
PRKDC-206ENST00000536429 PLXNB2O15031 1838 aa15.56■□□□□ 0.08
PRKDC-206ENST00000536429 UBXN2AP68543 259 aa15.55■□□□□ 0.08
PRKDC-206ENST00000536429 MAP2K5Q13163 448 aa15.55■□□□□ 0.08
PRKDC-206ENST00000536429 GRB14Q14449 540 aa15.55■□□□□ 0.08
PRKDC-206ENST00000536429 RCSD1Q6JBY9 416 aa15.55■□□□□ 0.08
PRKDC-206ENST00000536429 NCAPG2Q86XI2 1143 aa15.55■□□□□ 0.08
PRKDC-206ENST00000536429 KIFC2Q96AC6 838 aa15.55■□□□□ 0.08
PRKDC-206ENST00000536429 SHISA4Q96DD7 197 aa15.55■□□□□ 0.08
PRKDC-206ENST00000536429 GMCL1Q96IK5 515 aa15.55■□□□□ 0.08
PRKDC-206ENST00000536429 ZKSCAN3Q9BRR0 538 aa15.55■□□□□ 0.08
PRKDC-206ENST00000536429 RNF208Q9H0X6 261 aa15.55■□□□□ 0.08
PRKDC-206ENST00000536429 RNF41Q9H4P4 317 aaPredicted RBP15.55■□□□□ 0.08
PRKDC-206ENST00000536429 TCP11L1Q9NUJ3 509 aa15.55■□□□□ 0.08
PRKDC-206ENST00000536429 ZNF214Q9UL59 606 aaPredicted RBP15.55■□□□□ 0.08
PRKDC-206ENST00000536429 SLC15A5A6NIM6 579 aa15.54■□□□□ 0.08
PRKDC-206ENST00000536429 B4E1Z4 1266 aa15.54■□□□□ 0.08
PRKDC-206ENST00000536429 TMEM232C9JQI7 657 aa15.54■□□□□ 0.08
PRKDC-206ENST00000536429 HMGCRP04035 888 aa15.54■□□□□ 0.08
PRKDC-206ENST00000536429 PCP11498 1178 aaKnown RBP15.54■□□□□ 0.08
PRKDC-206ENST00000536429 BMP3P12645 472 aa15.54■□□□□ 0.08
PRKDC-206ENST00000536429 XRCC5P13010 732 aaKnown RBP15.54■□□□□ 0.08
PRKDC-206ENST00000536429 RGS2P41220 211 aa15.54■□□□□ 0.08
PRKDC-206ENST00000536429 IMMTQ16891 758 aaKnown RBP15.54■□□□□ 0.08
PRKDC-206ENST00000536429 KCTD1Q719H9 257 aa15.54■□□□□ 0.08
PRKDC-206ENST00000536429 SHCBP1Q8NEM2 672 aa15.54■□□□□ 0.08
PRKDC-206ENST00000536429 NPLOC4Q8TAT6 608 aa15.54■□□□□ 0.08
PRKDC-206ENST00000536429 RUFY2Q8WXA3 655 aa15.54■□□□□ 0.08
PRKDC-206ENST00000536429 APBA2Q99767 749 aa15.54■□□□□ 0.08
PRKDC-206ENST00000536429 TMEM47Q9BQJ4 181 aa15.54■□□□□ 0.08
PRKDC-206ENST00000536429 FLRT1Q9NZU1 646 aa15.54■□□□□ 0.08
PRKDC-206ENST00000536429 CTNNA3Q9UI47 895 aa15.54■□□□□ 0.08
PRKDC-206ENST00000536429 ISY1Q9ULR0 285 aaKnown RBP15.54■□□□□ 0.08
PRKDC-206ENST00000536429 KDM4AO75164 1064 aa15.53■□□□□ 0.08
PRKDC-206ENST00000536429 ADORA2AP29274 412 aa15.53■□□□□ 0.08
PRKDC-206ENST00000536429 STAT3P40763 770 aa15.53■□□□□ 0.08
PRKDC-206ENST00000536429 SLC1A4P43007 532 aa15.53■□□□□ 0.08
PRKDC-206ENST00000536429 BMP2KLQ5H9B9 411 aa15.53■□□□□ 0.08
PRKDC-206ENST00000536429 RIOX2Q8IUF8 465 aa15.53■□□□□ 0.08
PRKDC-206ENST00000536429 PRPF38AQ8NAV1 312 aaKnown RBP15.53■□□□□ 0.08
PRKDC-206ENST00000536429 ESR2Q92731 530 aa15.53■□□□□ 0.08
PRKDC-206ENST00000536429 FEM1BQ9UK73 627 aa15.53■□□□□ 0.08
PRKDC-206ENST00000536429 RIPK3Q9Y572 518 aa15.53■□□□□ 0.08
PRKDC-206ENST00000536429 COBLO75128 1261 aa15.52■□□□□ 0.08
PRKDC-206ENST00000536429 NEFLP07196 543 aa15.52■□□□□ 0.08
PRKDC-206ENST00000536429 GJB1P08034 283 aa15.52■□□□□ 0.08
PRKDC-206ENST00000536429 CYP21A2P08686 494 aa15.52■□□□□ 0.08
PRKDC-206ENST00000536429 TOP1P11387 765 aaKnown RBP15.52■□□□□ 0.08
PRKDC-206ENST00000536429 ZKSCAN1P17029 563 aaPredicted RBP15.52■□□□□ 0.08
PRKDC-206ENST00000536429 SNAP25P60880 206 aa15.52■□□□□ 0.08
PRKDC-206ENST00000536429 PPP4R3BQ5MIZ7 849 aa15.52■□□□□ 0.08
PRKDC-206ENST00000536429 MAP3K21Q5TCX8 1036 aa15.52■□□□□ 0.08
PRKDC-206ENST00000536429 TTBK2Q6IQ55 1244 aa15.52■□□□□ 0.08
PRKDC-206ENST00000536429 SLC38A10Q9HBR0 1119 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms