RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 DIAPH3Q9NSV4 1193 aa16.95■□□□□ 0.3
UBE3B-206ENST00000536398 RLFQ13129 1914 aa16.95■□□□□ 0.3
UBE3B-206ENST00000536398 RANBP6O60518 1105 aaKnown RBP16.94■□□□□ 0.3
UBE3B-206ENST00000536398 TTLL1O95922 423 aa16.94■□□□□ 0.3
UBE3B-206ENST00000536398 CCNA1P78396 465 aa16.94■□□□□ 0.3
UBE3B-206ENST00000536398 TMEM132BQ14DG7 1078 aa16.94■□□□□ 0.3
UBE3B-206ENST00000536398 CCL14Q16627 93 aa16.94■□□□□ 0.3
UBE3B-206ENST00000536398 SKAP1Q86WV1 359 aa16.94■□□□□ 0.3
UBE3B-206ENST00000536398 SHISA4Q96DD7 197 aa16.94■□□□□ 0.3
UBE3B-206ENST00000536398 SPATC1LQ9H0A9 340 aa16.94■□□□□ 0.3
UBE3B-206ENST00000536398 ADAMTS5Q9UNA0 930 aa16.94■□□□□ 0.3
UBE3B-206ENST00000536398 PLIN4Q96Q06 1357 aa16.93■□□□□ 0.3
UBE3B-206ENST00000536398 FGRP09769 529 aa16.93■□□□□ 0.3
UBE3B-206ENST00000536398 PTPREP23469 700 aa16.93■□□□□ 0.3
UBE3B-206ENST00000536398 PLS1Q14651 629 aa16.93■□□□□ 0.3
UBE3B-206ENST00000536398 RRP12Q5JTH9 1297 aaKnown RBP16.93■□□□□ 0.3
UBE3B-206ENST00000536398 TBC1D10CQ8IV04 446 aa16.93■□□□□ 0.3
UBE3B-206ENST00000536398 CWC22Q9HCG8 908 aaKnown RBP16.93■□□□□ 0.3
UBE3B-206ENST00000536398 PPP1R9AQ9ULJ8 1098 aa16.93■□□□□ 0.3
UBE3B-206ENST00000536398 TSPY2A6NKD2 308 aa16.92■□□□□ 0.3
UBE3B-206ENST00000536398 ORC4O43929 436 aa16.92■□□□□ 0.3
UBE3B-206ENST00000536398 GJB1P08034 283 aa16.92■□□□□ 0.3
UBE3B-206ENST00000536398 ERCC3P19447 782 aa16.92■□□□□ 0.3
UBE3B-206ENST00000536398 GJA8P48165 433 aa16.92■□□□□ 0.3
UBE3B-206ENST00000536398 SOCS4Q8WXH5 440 aa16.92■□□□□ 0.3
UBE3B-206ENST00000536398 TOMM22Q9NS69 142 aa16.92■□□□□ 0.3
UBE3B-206ENST00000536398 HIP1O00291 1037 aa16.91■□□□□ 0.3
UBE3B-206ENST00000536398 VWA5AO00534 786 aa16.91■□□□□ 0.3
UBE3B-206ENST00000536398 HMGCRP04035 888 aa16.91■□□□□ 0.3
UBE3B-206ENST00000536398 XRCC5P13010 732 aaKnown RBP16.91■□□□□ 0.3
UBE3B-206ENST00000536398 RGS2P41220 211 aa16.91■□□□□ 0.3
UBE3B-206ENST00000536398 MAP2K5Q13163 448 aa16.91■□□□□ 0.3
UBE3B-206ENST00000536398 SLFN13Q68D06 897 aa16.91■□□□□ 0.3
UBE3B-206ENST00000536398 RASGRP2Q7LDG7 609 aa16.91■□□□□ 0.3
UBE3B-206ENST00000536398 MB21D1Q8N884 522 aa16.91■□□□□ 0.3
UBE3B-206ENST00000536398 REPS2Q8NFH8 660 aa16.91■□□□□ 0.3
UBE3B-206ENST00000536398 NPLOC4Q8TAT6 608 aa16.91■□□□□ 0.3
UBE3B-206ENST00000536398 DEFB118Q96PH6 123 aa16.91■□□□□ 0.3
UBE3B-206ENST00000536398 FLRT1Q9NZU1 646 aa16.91■□□□□ 0.3
UBE3B-206ENST00000536398 RBBP6Q7Z6E9 1792 aaKnown RBP16.91■□□□□ 0.3
UBE3B-206ENST00000536398 SLC15A5A6NIM6 579 aa16.9■□□□□ 0.3
UBE3B-206ENST00000536398 MFAP1P55081 439 aaKnown RBP16.9■□□□□ 0.3
UBE3B-206ENST00000536398 GRB14Q14449 540 aa16.9■□□□□ 0.3
UBE3B-206ENST00000536398 NCAPG2Q86XI2 1143 aa16.9■□□□□ 0.3
UBE3B-206ENST00000536398 GMCL1P1Q8NEA9 526 aa16.9■□□□□ 0.3
UBE3B-206ENST00000536398 U2AF1L4Q8WU68 220 aaKnown RBP16.9■□□□□ 0.3
UBE3B-206ENST00000536398 SLF1Q9BQI6 1058 aa16.9■□□□□ 0.3
UBE3B-206ENST00000536398 PAK6Q9NQU5 681 aaPredicted RBP16.9■□□□□ 0.3
UBE3B-206ENST00000536398 STX8Q9UNK0 236 aa16.9■□□□□ 0.3
UBE3B-206ENST00000536398 ZMYM6O95789 1325 aa16.9■□□□□ 0.3
UBE3B-206ENST00000536398 SGPL1O95470 568 aa16.89■□□□□ 0.29
UBE3B-206ENST00000536398 PRKAR2AP13861 404 aaKnown RBP16.89■□□□□ 0.29
UBE3B-206ENST00000536398 ZKSCAN1P17029 563 aaPredicted RBP16.89■□□□□ 0.29
UBE3B-206ENST00000536398 MCCP23508 829 aa16.89■□□□□ 0.29
UBE3B-206ENST00000536398 NOVP48745 357 aa16.89■□□□□ 0.29
UBE3B-206ENST00000536398 CACNB2Q08289 660 aaPredicted RBP16.89■□□□□ 0.29
UBE3B-206ENST00000536398 AKNAD1Q5T1N1 836 aa16.89■□□□□ 0.29
UBE3B-206ENST00000536398 SHCBP1Q8NEM2 672 aa16.89■□□□□ 0.29
UBE3B-206ENST00000536398 APBA2Q99767 749 aa16.89■□□□□ 0.29
UBE3B-206ENST00000536398 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.89■□□□□ 0.29
UBE3B-206ENST00000536398 MTMR7Q9Y216 660 aa16.89■□□□□ 0.29
UBE3B-206ENST00000536398 IVNS1ABPQ9Y6Y0 642 aa16.89■□□□□ 0.29
UBE3B-206ENST00000536398 A0A0G2JMZ2 1700 aa16.89■□□□□ 0.29
UBE3B-206ENST00000536398 ZNF213O14771 459 aa16.88■□□□□ 0.29
UBE3B-206ENST00000536398 COBLO75128 1261 aa16.88■□□□□ 0.29
UBE3B-206ENST00000536398 CHMLP26374 656 aa16.88■□□□□ 0.29
UBE3B-206ENST00000536398 ADORA2AP29274 412 aa16.88■□□□□ 0.29
UBE3B-206ENST00000536398 STAT3P40763 770 aa16.88■□□□□ 0.29
UBE3B-206ENST00000536398 MAP3K21Q5TCX8 1036 aa16.88■□□□□ 0.29
UBE3B-206ENST00000536398 MFSD6Q6ZSS7 791 aa16.88■□□□□ 0.29
UBE3B-206ENST00000536398 STAG1Q8WVM7 1258 aa16.88■□□□□ 0.29
UBE3B-206ENST00000536398 KIFC2Q96AC6 838 aa16.88■□□□□ 0.29
UBE3B-206ENST00000536398 ZNF214Q9UL59 606 aaPredicted RBP16.88■□□□□ 0.29
UBE3B-206ENST00000536398 SYNPO2Q9UMS6 1093 aa16.88■□□□□ 0.29
UBE3B-206ENST00000536398 RIPK3Q9Y572 518 aa16.88■□□□□ 0.29
UBE3B-206ENST00000536398 PARP14Q460N5 1801 aa16.88■□□□□ 0.29
UBE3B-206ENST00000536398 NEDD4P46934 1319 aa16.88■□□□□ 0.29
UBE3B-206ENST00000536398 MYH4Q9Y623 1939 aa16.88■□□□□ 0.29
UBE3B-206ENST00000536398 TMEM232C9JQI7 657 aa16.87■□□□□ 0.29
UBE3B-206ENST00000536398 TFRCP02786 760 aaKnown RBP16.87■□□□□ 0.29
UBE3B-206ENST00000536398 BMP3P12645 472 aa16.87■□□□□ 0.29
UBE3B-206ENST00000536398 CCND3P30281 292 aaPredicted RBP16.87■□□□□ 0.29
UBE3B-206ENST00000536398 RIOX2Q8IUF8 465 aa16.87■□□□□ 0.29
UBE3B-206ENST00000536398 PRPF38AQ8NAV1 312 aaKnown RBP16.87■□□□□ 0.29
UBE3B-206ENST00000536398 DSCC1Q9BVC3 393 aa16.87■□□□□ 0.29
UBE3B-206ENST00000536398 MROH8Q9H579 483 aa16.87■□□□□ 0.29
UBE3B-206ENST00000536398 HMX1Q9NP08 348 aaPredicted RBP16.87■□□□□ 0.29
UBE3B-206ENST00000536398 FEM1BQ9UK73 627 aa16.87■□□□□ 0.29
UBE3B-206ENST00000536398 ISY1Q9ULR0 285 aaKnown RBP16.87■□□□□ 0.29
UBE3B-206ENST00000536398 RPTORQ8N122 1335 aa16.87■□□□□ 0.29
UBE3B-206ENST00000536398 STRNO43815 780 aa16.86■□□□□ 0.29
UBE3B-206ENST00000536398 HOXC6P09630 235 aa16.86■□□□□ 0.29
UBE3B-206ENST00000536398 SLC4A3P48751 1232 aa16.86■□□□□ 0.29
UBE3B-206ENST00000536398 KCTD1Q719H9 257 aa16.86■□□□□ 0.29
UBE3B-206ENST00000536398 UBE2Q1Q7Z7E8 422 aa16.86■□□□□ 0.29
UBE3B-206ENST00000536398 DPP9Q86TI2 863 aa16.86■□□□□ 0.29
UBE3B-206ENST00000536398 CPXCR1Q8N123 301 aa16.86■□□□□ 0.29
UBE3B-206ENST00000536398 GMCL1Q96IK5 515 aa16.86■□□□□ 0.29
UBE3B-206ENST00000536398 TMEM47Q9BQJ4 181 aa16.86■□□□□ 0.29
UBE3B-206ENST00000536398 ZKSCAN3Q9BRR0 538 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms