RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 PPP1R3GB7ZBB8 358 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 M0R2C6 588 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 MEFVO15553 781 aaPredicted RBP4.2□□□□□ -1.74
MCF2-210ENST00000536274 VAMP4O75379 141 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 HMOX1P09601 288 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 EZRP15311 586 aaKnown RBP4.2□□□□□ -1.74
MCF2-210ENST00000536274 FANCCQ00597 558 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 CAMK2BQ13554 666 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 DDB1Q16531 1140 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 KIF4BQ2VIQ3 1234 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 GALNT17Q6IS24 598 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 MIS18BP1Q6P0N0 1132 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 RBM43Q6ZSC3 357 aaKnown RBP4.2□□□□□ -1.74
MCF2-210ENST00000536274 SPATA21Q7Z572 469 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 OR8K1Q8NGG5 319 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 SEC62Q99442 399 aaKnown RBP4.2□□□□□ -1.74
MCF2-210ENST00000536274 ARHGEF10LQ9HCE6 1279 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 MYO1AQ9UBC5 1043 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 IKBKBO14920 756 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 EIF3HO15372 352 aaKnown RBP eCLIP4.2□□□□□ -1.74
MCF2-210ENST00000536274 ZSCAN9O15535 394 aaPredicted RBP4.2□□□□□ -1.74
MCF2-210ENST00000536274 SERPINC1P01008 464 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 CDR1P51861 262 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 SLC39A6Q13433 755 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 STIM1Q13586 685 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 SPECC1Q5M775 1068 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 ARMC9Q7Z3E5 817 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 TMEM139Q8IV31 216 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 SLC35F6Q8N357 371 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 TMTC2Q8N394 836 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 CEP112Q8N8E3 955 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 RASSF8Q8NHQ8 419 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 ZNF570Q96NI8 536 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 PLEKHF1Q96S99 279 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 CENPOQ9BU64 300 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 UBE2OQ9C0C9 1292 aaKnown RBP4.2□□□□□ -1.74
MCF2-210ENST00000536274 MMADHCQ9H3L0 296 aaPredicted RBP4.2□□□□□ -1.74
MCF2-210ENST00000536274 TRIM10Q9UDY6 481 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 CD2APQ9Y5K6 639 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 C4AP0C0L4 1744 aa4.2□□□□□ -1.74
MCF2-210ENST00000536274 CYP27B1O15528 508 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 BUB1BO60566 1050 aaPredicted RBP4.19□□□□□ -1.74
MCF2-210ENST00000536274 ERLIN1O75477 346 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 FSBPO95073 299 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 RTN3O95197 1032 aaPredicted RBP4.19□□□□□ -1.74
MCF2-210ENST00000536274 HSPA4P34932 840 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 TRIM68Q6AZZ1 485 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 CCDC50Q8IVM0 306 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 TRIM42Q8IWZ5 723 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 AMOTL1Q8IY63 956 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 FUKQ8N0W3 1084 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 ZNF784Q8NCA9 323 aaPredicted RBP4.19□□□□□ -1.74
MCF2-210ENST00000536274 CCDC150Q8NCX0 1101 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 PLEKHG4BQ96PX9 1271 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 SDF4Q9BRK5 362 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 CDK19Q9BWU1 502 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 TEX13AQ9BXU3 409 aaPredicted RBP4.19□□□□□ -1.74
MCF2-210ENST00000536274 LRRC2Q9BYS8 371 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 PPP1R1BQ9UD71 204 aaPredicted RBP4.19□□□□□ -1.74
MCF2-210ENST00000536274 COBLO75128 1261 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 RNF8O76064 485 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 TRIM37O94972 964 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 UBASH3AP57075 661 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 HSP90AB2PQ58FF8 381 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 CEP57L1Q8IYX8 460 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 ANKRD44Q8N8A2 993 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 FSIP1Q8NA03 581 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 TCP11Q8WWU5 503 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 PRCCQ92733 491 aaPredicted RBP4.19□□□□□ -1.74
MCF2-210ENST00000536274 KHSRPQ92945 711 aaKnown RBP eCLIP4.19□□□□□ -1.74
MCF2-210ENST00000536274 BICD1Q96G01 975 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 KCNK17Q96T54 332 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 PHAXQ9H814 394 aaKnown RBP4.19□□□□□ -1.74
MCF2-210ENST00000536274 VCPKMTQ9H867 229 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 PPANQ9NQ55 473 aaKnown RBP4.19□□□□□ -1.74
MCF2-210ENST00000536274 KCND1Q9NSA2 647 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 ANKIB1Q9P2G1 1089 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 GGT7Q9UJ14 662 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 A8MUI8 341 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 DIAPH2O60879 1101 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 SHOX2O60902 331 aaPredicted RBP4.19□□□□□ -1.74
MCF2-210ENST00000536274 SMIM24O75264 130 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 ZNF189O75820 626 aaPredicted RBP4.19□□□□□ -1.74
MCF2-210ENST00000536274 SMNDC1O75940 238 aaKnown RBP eCLIP4.19□□□□□ -1.74
MCF2-210ENST00000536274 ANP32DO95626 131 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 KRT14P02533 472 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 ABL2P42684 1182 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 SLC7A5Q01650 507 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 NCAPHQ15003 741 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 INF2Q27J81 1249 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 TTMPQ5BVD1 217 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 RRP12Q5JTH9 1297 aaKnown RBP4.19□□□□□ -1.74
MCF2-210ENST00000536274 NAA35Q5VZE5 725 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 TMEM132EQ6IEE7 984 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 SLC30A9Q6PML9 568 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 SAPCD2Q86UD0 394 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 ELOA2Q8IYF1 753 aaPredicted RBP4.19□□□□□ -1.74
MCF2-210ENST00000536274 SPICE1Q8N0Z3 855 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 PHC3Q8NDX5 983 aa4.19□□□□□ -1.74
MCF2-210ENST00000536274 MPHOSPH8Q99549 860 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms