RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 LHX8Q68G74 356 aa15.68■□□□□ 0.1
RTN3-207ENST00000536011 OSBP2Q969R2 916 aa15.68■□□□□ 0.1
RTN3-207ENST00000536011 ATG4CQ96DT6 458 aa15.68■□□□□ 0.1
RTN3-207ENST00000536011 PRO3102Q9H379 93 aa15.68■□□□□ 0.1
RTN3-207ENST00000536011 DDX20Q9UHI6 824 aaKnown RBP15.68■□□□□ 0.1
RTN3-207ENST00000536011 RLFQ13129 1914 aa15.67■□□□□ 0.1
RTN3-207ENST00000536011 SLC3A2P08195 630 aaKnown RBP15.67■□□□□ 0.1
RTN3-207ENST00000536011 FCER1AP12319 257 aa15.67■□□□□ 0.1
RTN3-207ENST00000536011 CNGA1P29973 690 aa15.67■□□□□ 0.1
RTN3-207ENST00000536011 MNX1P50219 401 aaPredicted RBP15.67■□□□□ 0.1
RTN3-207ENST00000536011 FSD1Q9BTV5 496 aa15.67■□□□□ 0.1
RTN3-207ENST00000536011 FLRT1Q9NZU1 646 aa15.67■□□□□ 0.1
RTN3-207ENST00000536011 PCDHB15Q9Y5E8 787 aa15.67■□□□□ 0.1
RTN3-207ENST00000536011 SZT2Q5T011 3432 aa15.67■□□□□ 0.1
RTN3-207ENST00000536011 SMIM22K7EJ46 135 aa15.66■□□□□ 0.1
RTN3-207ENST00000536011 COL6A1P12109 1028 aa15.66■□□□□ 0.1
RTN3-207ENST00000536011 MX1P20591 662 aa15.66■□□□□ 0.1
RTN3-207ENST00000536011 RASA1P20936 1047 aa15.66■□□□□ 0.1
RTN3-207ENST00000536011 CYP2C19P33261 490 aa15.66■□□□□ 0.1
RTN3-207ENST00000536011 ZNF444Q8N0Y2 327 aaPredicted RBP15.66■□□□□ 0.1
RTN3-207ENST00000536011 NPLOC4Q8TAT6 608 aa15.66■□□□□ 0.1
RTN3-207ENST00000536011 NYAP2Q9P242 653 aa15.66■□□□□ 0.1
RTN3-207ENST00000536011 PPP1R9AQ9ULJ8 1098 aa15.66■□□□□ 0.1
RTN3-207ENST00000536011 SYNPO2Q9UMS6 1093 aa15.66■□□□□ 0.1
RTN3-207ENST00000536011 ALPK3Q96L96 1907 aa15.66■□□□□ 0.1
RTN3-207ENST00000536011 LAMA3Q16787 3333 aa15.66■□□□□ 0.1
RTN3-207ENST00000536011 PFASO15067 1338 aa15.66■□□□□ 0.1
RTN3-207ENST00000536011 GREB1LQ9C091 1923 aaPredicted RBP15.65■□□□□ 0.1
RTN3-207ENST00000536011 PATL2C9JE40 543 aaKnown RBP15.65■□□□□ 0.1
RTN3-207ENST00000536011 PDE4BQ07343 736 aa15.65■□□□□ 0.1
RTN3-207ENST00000536011 TMEM132BQ14DG7 1078 aa15.65■□□□□ 0.1
RTN3-207ENST00000536011 PI4K2BQ8TCG2 481 aa15.65■□□□□ 0.1
RTN3-207ENST00000536011 ADAMTS5Q9UNA0 930 aa15.65■□□□□ 0.1
RTN3-207ENST00000536011 PARP14Q460N5 1801 aa15.65■□□□□ 0.1
RTN3-207ENST00000536011 FRMPD3Q5JV73 1810 aa15.65■□□□□ 0.1
RTN3-207ENST00000536011 DNAH12Q6ZR08 3092 aa15.64■□□□□ 0.09
RTN3-207ENST00000536011 M0R2C6 588 aa15.64■□□□□ 0.09
RTN3-207ENST00000536011 DNM1LO00429 736 aa15.64■□□□□ 0.09
RTN3-207ENST00000536011 VWA5AO00534 786 aa15.64■□□□□ 0.09
RTN3-207ENST00000536011 CYBAP13498 195 aa15.64■□□□□ 0.09
RTN3-207ENST00000536011 KCTD2Q14681 263 aa15.64■□□□□ 0.09
RTN3-207ENST00000536011 PPP4R3BQ5MIZ7 849 aa15.64■□□□□ 0.09
RTN3-207ENST00000536011 FAM83BQ5T0W9 1011 aa15.64■□□□□ 0.09
RTN3-207ENST00000536011 RIOX2Q8IUF8 465 aa15.64■□□□□ 0.09
RTN3-207ENST00000536011 ARRDC4Q8NCT1 418 aa15.64■□□□□ 0.09
RTN3-207ENST00000536011 MMP19Q99542 508 aa15.64■□□□□ 0.09
RTN3-207ENST00000536011 SLF1Q9BQI6 1058 aa15.64■□□□□ 0.09
RTN3-207ENST00000536011 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.64■□□□□ 0.09
RTN3-207ENST00000536011 NAPBQ9H115 298 aa15.64■□□□□ 0.09
RTN3-207ENST00000536011 EPB41L4AQ9HCS5 686 aaPredicted RBP15.64■□□□□ 0.09
RTN3-207ENST00000536011 FBXO28Q9NVF7 368 aa15.64■□□□□ 0.09
RTN3-207ENST00000536011 STAP2Q9UGK3 403 aa15.64■□□□□ 0.09
RTN3-207ENST00000536011 NRBP1Q9UHY1 535 aa15.64■□□□□ 0.09
RTN3-207ENST00000536011 ZMYND8Q9ULU4 1186 aaPredicted RBP15.64■□□□□ 0.09
RTN3-207ENST00000536011 CTDP1Q9Y5B0 961 aaPredicted RBP15.64■□□□□ 0.09
RTN3-207ENST00000536011 SEPT4O43236 478 aa15.63■□□□□ 0.09
RTN3-207ENST00000536011 IGHA2P01877 340 aa15.63■□□□□ 0.09
RTN3-207ENST00000536011 BMP8BP34820 402 aa15.63■□□□□ 0.09
RTN3-207ENST00000536011 STAT3P40763 770 aa15.63■□□□□ 0.09
RTN3-207ENST00000536011 AAMPQ13685 434 aa15.63■□□□□ 0.09
RTN3-207ENST00000536011 IFNL3Q8IZI9 196 aa15.63■□□□□ 0.09
RTN3-207ENST00000536011 STK11IPQ8N1F8 1099 aa15.63■□□□□ 0.09
RTN3-207ENST00000536011 TEX13BQ9BXU2 312 aa15.63■□□□□ 0.09
RTN3-207ENST00000536011 PLIN4Q96Q06 1357 aa15.62■□□□□ 0.09
RTN3-207ENST00000536011 KBTBD13C9JR72 458 aa15.62■□□□□ 0.09
RTN3-207ENST00000536011 F5H6K3 240 aa15.62■□□□□ 0.09
RTN3-207ENST00000536011 COBLO75128 1261 aa15.62■□□□□ 0.09
RTN3-207ENST00000536011 TTLL1O95922 423 aa15.62■□□□□ 0.09
RTN3-207ENST00000536011 NDUFB10O96000 172 aa15.62■□□□□ 0.09
RTN3-207ENST00000536011 KLRC3Q07444 240 aa15.62■□□□□ 0.09
RTN3-207ENST00000536011 ZMYM1Q5SVZ6 1142 aa15.62■□□□□ 0.09
RTN3-207ENST00000536011 PRPF38AQ8NAV1 312 aaKnown RBP15.62■□□□□ 0.09
RTN3-207ENST00000536011 MAML3Q96JK9 1138 aa15.62■□□□□ 0.09
RTN3-207ENST00000536011 GDF15Q99988 308 aa15.62■□□□□ 0.09
RTN3-207ENST00000536011 CLIP2Q9UDT6 1046 aa15.62■□□□□ 0.09
RTN3-207ENST00000536011 ZNF214Q9UL59 606 aaPredicted RBP15.62■□□□□ 0.09
RTN3-207ENST00000536011 DIS3Q9Y2L1 958 aaKnown RBP15.62■□□□□ 0.09
RTN3-207ENST00000536011 ZBED4O75132 1171 aa15.61■□□□□ 0.09
RTN3-207ENST00000536011 TSPY3P0CV98 308 aa15.61■□□□□ 0.09
RTN3-207ENST00000536011 TSPY8P0CW00 308 aa15.61■□□□□ 0.09
RTN3-207ENST00000536011 HDAC1Q13547 482 aaPredicted RBP15.61■□□□□ 0.09
RTN3-207ENST00000536011 ANKRD45Q5TZF3 282 aa15.61■□□□□ 0.09
RTN3-207ENST00000536011 TICAM2Q86XR7 235 aa15.61■□□□□ 0.09
RTN3-207ENST00000536011 TRPV1Q8NER1 839 aa15.61■□□□□ 0.09
RTN3-207ENST00000536011 OTUD7AQ8TE49 926 aaPredicted RBP15.61■□□□□ 0.09
RTN3-207ENST00000536011 SENP6Q9GZR1 1112 aaPredicted RBP15.61■□□□□ 0.09
RTN3-207ENST00000536011 MTMR4Q9NYA4 1195 aa15.61■□□□□ 0.09
RTN3-207ENST00000536011 COL11A1P12107 1806 aaPredicted RBP15.61■□□□□ 0.09
RTN3-207ENST00000536011 IGKV6D-41A0A0C4DH26 115 aa15.6■□□□□ 0.09
RTN3-207ENST00000536011 PRDM1O75626 825 aa15.6■□□□□ 0.09
RTN3-207ENST00000536011 SYN1P17600 705 aa15.6■□□□□ 0.09
RTN3-207ENST00000536011 MAGEA10P43363 369 aaPredicted RBP15.6■□□□□ 0.09
RTN3-207ENST00000536011 PPARAQ07869 468 aa15.6■□□□□ 0.09
RTN3-207ENST00000536011 LRRC26Q2I0M4 334 aa15.6■□□□□ 0.09
RTN3-207ENST00000536011 SNRNP48Q6IEG0 339 aaKnown RBP15.6■□□□□ 0.09
RTN3-207ENST00000536011 GMCL1P1Q8NEA9 526 aa15.6■□□□□ 0.09
RTN3-207ENST00000536011 MKL1Q969V6 931 aa15.6■□□□□ 0.09
RTN3-207ENST00000536011 EVI5LQ96CN4 794 aa15.6■□□□□ 0.09
RTN3-207ENST00000536011 CEP95Q96GE4 821 aa15.6■□□□□ 0.09
RTN3-207ENST00000536011 CRBNQ96SW2 442 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms