RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 LIMA1Q9UHB6 759 aaKnown RBP18.15■□□□□ 0.5
CHMP1A-202ENST00000535997 MRFAP1Q9Y605 127 aa18.15■□□□□ 0.5
CHMP1A-202ENST00000535997 CYP2D6P10635 497 aa18.15■□□□□ 0.5
CHMP1A-202ENST00000535997 VEGFAP15692 232 aaPredicted RBP18.15■□□□□ 0.5
CHMP1A-202ENST00000535997 SPAG1Q07617 926 aa18.15■□□□□ 0.5
CHMP1A-202ENST00000535997 RC3H1Q5TC82 1133 aaKnown RBP18.15■□□□□ 0.5
CHMP1A-202ENST00000535997 BLIDQ8IZY5 108 aa18.15■□□□□ 0.5
CHMP1A-202ENST00000535997 C4orf32Q8N8J7 132 aa18.15■□□□□ 0.5
CHMP1A-202ENST00000535997 STAMQ92783 540 aa18.15■□□□□ 0.5
CHMP1A-202ENST00000535997 KIFC2Q96AC6 838 aa18.15■□□□□ 0.5
CHMP1A-202ENST00000535997 ADGRG1Q9Y653 693 aa18.15■□□□□ 0.5
CHMP1A-202ENST00000535997 CCDC178Q5BJE1 867 aa18.14■□□□□ 0.49
CHMP1A-202ENST00000535997 RRAGBQ5VZM2 374 aa18.14■□□□□ 0.49
CHMP1A-202ENST00000535997 MTRQ99707 1265 aa18.14■□□□□ 0.49
CHMP1A-202ENST00000535997 DESI2Q9BSY9 194 aa18.14■□□□□ 0.49
CHMP1A-202ENST00000535997 FHOD1Q9Y613 1164 aa18.14■□□□□ 0.49
CHMP1A-202ENST00000535997 SOWAHDA6NJG2 315 aa18.14■□□□□ 0.49
CHMP1A-202ENST00000535997 MFAP3LO75121 409 aa18.14■□□□□ 0.49
CHMP1A-202ENST00000535997 TXLNAP40222 546 aa18.14■□□□□ 0.49
CHMP1A-202ENST00000535997 GNAQP50148 359 aa18.14■□□□□ 0.49
CHMP1A-202ENST00000535997 TFAP4Q01664 338 aa18.14■□□□□ 0.49
CHMP1A-202ENST00000535997 ZNF658Q5TYW1 1059 aaPredicted RBP18.14■□□□□ 0.49
CHMP1A-202ENST00000535997 C12orf60Q5U649 245 aa18.14■□□□□ 0.49
CHMP1A-202ENST00000535997 TMCO3Q6UWJ1 677 aa18.14■□□□□ 0.49
CHMP1A-202ENST00000535997 DZIP1Q86YF9 867 aaKnown RBP18.14■□□□□ 0.49
CHMP1A-202ENST00000535997 CPLX3Q8WVH0 158 aa18.14■□□□□ 0.49
CHMP1A-202ENST00000535997 BLZF1Q9H2G9 400 aa18.14■□□□□ 0.49
CHMP1A-202ENST00000535997 MKRN1Q9UHC7 482 aaKnown RBP18.14■□□□□ 0.49
CHMP1A-202ENST00000535997 PCDHA4Q9UN74 947 aa18.14■□□□□ 0.49
CHMP1A-202ENST00000535997 CASZ1Q86V15 1759 aa18.14■□□□□ 0.49
CHMP1A-202ENST00000535997 RPS6KA4O75676 772 aa18.13■□□□□ 0.49
CHMP1A-202ENST00000535997 ZRANB2O95218 330 aaKnown RBP eCLIP18.13■□□□□ 0.49
CHMP1A-202ENST00000535997 MTF1Q14872 753 aa18.13■□□□□ 0.49
CHMP1A-202ENST00000535997 RASGRP2Q7LDG7 609 aa18.13■□□□□ 0.49
CHMP1A-202ENST00000535997 GPR161Q8N6U8 529 aaKnown RBP18.13■□□□□ 0.49
CHMP1A-202ENST00000535997 IL17RBQ9NRM6 502 aa18.13■□□□□ 0.49
CHMP1A-202ENST00000535997 CTNND2Q9UQB3 1225 aa18.13■□□□□ 0.49
CHMP1A-202ENST00000535997 CCDC88AQ3V6T2 1871 aa18.13■□□□□ 0.49
CHMP1A-202ENST00000535997 ATP8B1O43520 1251 aa18.12■□□□□ 0.49
CHMP1A-202ENST00000535997 FECHP22830 423 aa18.12■□□□□ 0.49
CHMP1A-202ENST00000535997 CASP14P31944 242 aa18.12■□□□□ 0.49
CHMP1A-202ENST00000535997 PAK1Q13153 545 aa18.12■□□□□ 0.49
CHMP1A-202ENST00000535997 TERF2Q15554 542 aa18.12■□□□□ 0.49
CHMP1A-202ENST00000535997 GALNT17Q6IS24 598 aa18.12■□□□□ 0.49
CHMP1A-202ENST00000535997 RAD9BQ6WBX8 426 aa18.12■□□□□ 0.49
CHMP1A-202ENST00000535997 PNMA1Q8ND90 353 aa18.12■□□□□ 0.49
CHMP1A-202ENST00000535997 ANKRD20A12PQ8NF67 263 aa18.12■□□□□ 0.49
CHMP1A-202ENST00000535997 MRPL44Q9H9J2 332 aaKnown RBP18.12■□□□□ 0.49
CHMP1A-202ENST00000535997 LAMB1P07942 1786 aa18.12■□□□□ 0.49
CHMP1A-202ENST00000535997 N4BP3O15049 544 aa18.12■□□□□ 0.49
CHMP1A-202ENST00000535997 ZPR1O75312 459 aa18.12■□□□□ 0.49
CHMP1A-202ENST00000535997 USP17L8P0C7I0 530 aa18.12■□□□□ 0.49
CHMP1A-202ENST00000535997 TM4SF1P30408 202 aa18.12■□□□□ 0.49
CHMP1A-202ENST00000535997 FAM193AP78312 1265 aa18.12■□□□□ 0.49
CHMP1A-202ENST00000535997 KRT31Q15323 416 aa18.12■□□□□ 0.49
CHMP1A-202ENST00000535997 TXNRD3Q86VQ6 643 aa18.12■□□□□ 0.49
CHMP1A-202ENST00000535997 RPN1P04843 607 aaKnown RBP18.11■□□□□ 0.49
CHMP1A-202ENST00000535997 GYPCP04921 128 aa18.11■□□□□ 0.49
CHMP1A-202ENST00000535997 KCNQ4P56696 695 aa18.11■□□□□ 0.49
CHMP1A-202ENST00000535997 PPP2R3AQ06190 1150 aa18.11■□□□□ 0.49
CHMP1A-202ENST00000535997 RSRC2Q7L4I2 434 aaKnown RBP18.11■□□□□ 0.49
CHMP1A-202ENST00000535997 WDR66Q8TBY9 1149 aa18.11■□□□□ 0.49
CHMP1A-202ENST00000535997 TCP11L1Q9NUJ3 509 aa18.11■□□□□ 0.49
CHMP1A-202ENST00000535997 ADAMTS3O15072 1205 aa18.11■□□□□ 0.49
CHMP1A-202ENST00000535997 PNMA6AP0CW24 399 aaPredicted RBP18.11■□□□□ 0.49
CHMP1A-202ENST00000535997 SEMA3FQ13275 785 aa18.11■□□□□ 0.49
CHMP1A-202ENST00000535997 TCP11X2Q5H9J9 407 aa18.11■□□□□ 0.49
CHMP1A-202ENST00000535997 TMTC1Q8IUR5 882 aa18.11■□□□□ 0.49
CHMP1A-202ENST00000535997 CCDC12Q8WUD4 166 aaPredicted RBP18.11■□□□□ 0.49
CHMP1A-202ENST00000535997 IRS2Q9Y4H2 1338 aa18.1■□□□□ 0.49
CHMP1A-202ENST00000535997 H7C1D1 291 aa18.1■□□□□ 0.49
CHMP1A-202ENST00000535997 M0R2N6 131 aa18.1■□□□□ 0.49
CHMP1A-202ENST00000535997 KIF5CO60282 957 aa18.1■□□□□ 0.49
CHMP1A-202ENST00000535997 USP5P45974 858 aa18.1■□□□□ 0.49
CHMP1A-202ENST00000535997 TUBB2AQ13885 445 aa18.1■□□□□ 0.49
CHMP1A-202ENST00000535997 TRIM14Q14142 442 aa18.1■□□□□ 0.49
CHMP1A-202ENST00000535997 GRM4Q14833 912 aa18.1■□□□□ 0.49
CHMP1A-202ENST00000535997 KARSQ15046 597 aaKnown RBP18.1■□□□□ 0.49
CHMP1A-202ENST00000535997 DTHD1Q6ZMT9 781 aa18.1■□□□□ 0.49
CHMP1A-202ENST00000535997 RABGGTAQ92696 567 aa18.1■□□□□ 0.49
CHMP1A-202ENST00000535997 TUBB2BQ9BVA1 445 aa18.1■□□□□ 0.49
CHMP1A-202ENST00000535997 MKNK2Q9HBH9 465 aa18.1■□□□□ 0.49
CHMP1A-202ENST00000535997 KIAA1551Q9HCM1 1747 aa18.1■□□□□ 0.49
CHMP1A-202ENST00000535997 CCDC194A0A1B0GVG4 234 aa18.1■□□□□ 0.49
CHMP1A-202ENST00000535997 MYL1P05976 194 aa18.1■□□□□ 0.49
CHMP1A-202ENST00000535997 LDHBP07195 334 aaKnown RBP18.1■□□□□ 0.49
CHMP1A-202ENST00000535997 STAT6P42226 847 aa18.1■□□□□ 0.49
CHMP1A-202ENST00000535997 FXR1P51114 621 aaKnown RBP eCLIP18.1■□□□□ 0.49
CHMP1A-202ENST00000535997 NELFBQ8WX92 580 aa18.1■□□□□ 0.49
CHMP1A-202ENST00000535997 LZTFL1Q9NQ48 299 aa18.1■□□□□ 0.49
CHMP1A-202ENST00000535997 SRP68Q9UHB9 627 aaKnown RBP18.1■□□□□ 0.49
CHMP1A-202ENST00000535997 ZHX1Q9UKY1 873 aaPredicted RBP18.1■□□□□ 0.49
CHMP1A-202ENST00000535997 NUTM2BA6NNL0 878 aaPredicted RBP18.09■□□□□ 0.49
CHMP1A-202ENST00000535997 NUTM2EB1AL46 878 aaPredicted RBP18.09■□□□□ 0.49
CHMP1A-202ENST00000535997 BAG3O95817 575 aa18.09■□□□□ 0.49
CHMP1A-202ENST00000535997 CCT6AP40227 531 aaKnown RBP18.09■□□□□ 0.49
CHMP1A-202ENST00000535997 COPB1P53618 953 aaKnown RBP18.09■□□□□ 0.49
CHMP1A-202ENST00000535997 AMOTL1Q8IY63 956 aa18.09■□□□□ 0.49
CHMP1A-202ENST00000535997 STAG2Q8N3U4 1231 aa18.09■□□□□ 0.49
CHMP1A-202ENST00000535997 DAGLBQ8NCG7 672 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms