RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 MAPK4P31152 587 aa10.56□□□□□ -0.72
CHD4-204ENST00000535810 UBXN2AP68543 259 aa10.56□□□□□ -0.72
CHD4-204ENST00000535810 NUCB1Q02818 461 aa10.56□□□□□ -0.72
CHD4-204ENST00000535810 Q3C1V9 767 aa10.56□□□□□ -0.72
CHD4-204ENST00000535810 CCDC129Q6ZRS4 1044 aa10.56□□□□□ -0.72
CHD4-204ENST00000535810 IFNL3Q8IZI9 196 aa10.56□□□□□ -0.72
CHD4-204ENST00000535810 SPICE1Q8N0Z3 855 aa10.56□□□□□ -0.72
CHD4-204ENST00000535810 STK11IPQ8N1F8 1099 aa10.56□□□□□ -0.72
CHD4-204ENST00000535810 SOCS4Q8WXH5 440 aa10.56□□□□□ -0.72
CHD4-204ENST00000535810 SHISA4Q96DD7 197 aa10.56□□□□□ -0.72
CHD4-204ENST00000535810 NACAP1Q9BZK3 213 aa10.56□□□□□ -0.72
CHD4-204ENST00000535810 TANGO6Q9C0B7 1094 aa10.56□□□□□ -0.72
CHD4-204ENST00000535810 VCPKMTQ9H867 229 aa10.56□□□□□ -0.72
CHD4-204ENST00000535810 KANSL2Q9H9L4 492 aa10.56□□□□□ -0.72
CHD4-204ENST00000535810 BIN2Q9UBW5 565 aaPredicted RBP10.56□□□□□ -0.72
CHD4-204ENST00000535810 PLXNB2O15031 1838 aa10.56□□□□□ -0.72
CHD4-204ENST00000535810 RLFQ13129 1914 aa10.55□□□□□ -0.72
CHD4-204ENST00000535810 GABBR2O75899 941 aa10.55□□□□□ -0.72
CHD4-204ENST00000535810 GJB1P08034 283 aa10.55□□□□□ -0.72
CHD4-204ENST00000535810 CLCN6P51797 869 aa10.55□□□□□ -0.72
CHD4-204ENST00000535810 GPR142Q7Z601 462 aa10.55□□□□□ -0.72
CHD4-204ENST00000535810 PLEKHM2Q8IWE5 1019 aa10.55□□□□□ -0.72
CHD4-204ENST00000535810 RNF208Q9H0X6 261 aa10.55□□□□□ -0.72
CHD4-204ENST00000535810 UNC93B1Q9H1C4 597 aa10.55□□□□□ -0.72
CHD4-204ENST00000535810 MKNK2Q9HBH9 465 aa10.55□□□□□ -0.72
CHD4-204ENST00000535810 BTBD7Q9P203 1132 aa10.55□□□□□ -0.72
CHD4-204ENST00000535810 A0A0G2JMZ2 1700 aa10.55□□□□□ -0.72
CHD4-204ENST00000535810 IGKV6D-41A0A0C4DH26 115 aa10.54□□□□□ -0.72
CHD4-204ENST00000535810 A0A0D9SFI3 127 aa10.54□□□□□ -0.72
CHD4-204ENST00000535810 WDR46O15213 610 aaKnown RBP10.54□□□□□ -0.72
CHD4-204ENST00000535810 PRDM1O75626 825 aa10.54□□□□□ -0.72
CHD4-204ENST00000535810 FLOT1O75955 427 aa10.54□□□□□ -0.72
CHD4-204ENST00000535810 HMGCRP04035 888 aa10.54□□□□□ -0.72
CHD4-204ENST00000535810 GJA8P48165 433 aa10.54□□□□□ -0.72
CHD4-204ENST00000535810 CCNA1P78396 465 aa10.54□□□□□ -0.72
CHD4-204ENST00000535810 ATP2B2Q01814 1243 aa10.54□□□□□ -0.72
CHD4-204ENST00000535810 PPARAQ07869 468 aa10.54□□□□□ -0.72
CHD4-204ENST00000535810 COG2Q14746 738 aa10.54□□□□□ -0.72
CHD4-204ENST00000535810 MORN1Q5T089 497 aa10.54□□□□□ -0.72
CHD4-204ENST00000535810 PLEKHH3Q7Z736 793 aa10.54□□□□□ -0.72
CHD4-204ENST00000535810 TICAM2Q86XR7 235 aa10.54□□□□□ -0.72
CHD4-204ENST00000535810 CCAR1Q8IX12 1150 aaKnown RBP10.54□□□□□ -0.72
CHD4-204ENST00000535810 USP6NLQ92738 828 aa10.54□□□□□ -0.72
CHD4-204ENST00000535810 FAM227BQ96M60 508 aa10.54□□□□□ -0.72
CHD4-204ENST00000535810 NUDT12Q9BQG2 462 aa10.54□□□□□ -0.72
CHD4-204ENST00000535810 NAPBQ9H115 298 aa10.54□□□□□ -0.72
CHD4-204ENST00000535810 OSBPL3Q9H4L5 887 aa10.54□□□□□ -0.72
CHD4-204ENST00000535810 ZNF287Q9HBT7 754 aa10.54□□□□□ -0.72
CHD4-204ENST00000535810 HELLSQ9NRZ9 838 aa10.54□□□□□ -0.72
CHD4-204ENST00000535810 WDR70Q9NW82 654 aa10.54□□□□□ -0.72
CHD4-204ENST00000535810 UNC80Q8N2C7 3258 aa10.54□□□□□ -0.72
CHD4-204ENST00000535810 PLIN4Q96Q06 1357 aa10.53□□□□□ -0.72
CHD4-204ENST00000535810 ATMINO43313 823 aaPredicted RBP10.53□□□□□ -0.72
CHD4-204ENST00000535810 XRCC5P13010 732 aaKnown RBP10.53□□□□□ -0.72
CHD4-204ENST00000535810 CYP2B6P20813 491 aa10.53□□□□□ -0.72
CHD4-204ENST00000535810 RGS2P41220 211 aa10.53□□□□□ -0.72
CHD4-204ENST00000535810 IRX6P78412 446 aaPredicted RBP10.53□□□□□ -0.72
CHD4-204ENST00000535810 VPS53Q5VIR6 699 aa10.53□□□□□ -0.72
CHD4-204ENST00000535810 NKX2-3Q8TAU0 364 aa10.53□□□□□ -0.72
CHD4-204ENST00000535810 U2AF1L4Q8WU68 220 aaKnown RBP10.53□□□□□ -0.72
CHD4-204ENST00000535810 TRIB2Q92519 343 aa10.53□□□□□ -0.72
CHD4-204ENST00000535810 PRO3102Q9H379 93 aa10.53□□□□□ -0.72
CHD4-204ENST00000535810 GOPCQ9HD26 462 aa10.53□□□□□ -0.72
CHD4-204ENST00000535810 PAK6Q9NQU5 681 aaPredicted RBP10.53□□□□□ -0.72
CHD4-204ENST00000535810 HOXC10Q9NYD6 342 aa10.53□□□□□ -0.72
CHD4-204ENST00000535810 GTF3C3Q9Y5Q9 886 aa10.53□□□□□ -0.72
CHD4-204ENST00000535810 VCANP13611 3396 aa10.53□□□□□ -0.72
CHD4-204ENST00000535810 PARP14Q460N5 1801 aa10.52□□□□□ -0.73
CHD4-204ENST00000535810 TRIM6-TRIM34B2RNG4 842 aa10.52□□□□□ -0.73
CHD4-204ENST00000535810 SLC3A2P08195 630 aaKnown RBP10.52□□□□□ -0.73
CHD4-204ENST00000535810 PDE4BQ07343 736 aa10.52□□□□□ -0.73
CHD4-204ENST00000535810 TRIM32Q13049 653 aa10.52□□□□□ -0.73
CHD4-204ENST00000535810 NMIQ13287 307 aaPredicted RBP10.52□□□□□ -0.73
CHD4-204ENST00000535810 MCMDC2Q4G0Z9 681 aa10.52□□□□□ -0.73
CHD4-204ENST00000535810 WDR78Q5VTH9 848 aa10.52□□□□□ -0.73
CHD4-204ENST00000535810 ZNF589Q86UQ0 364 aaPredicted RBP10.52□□□□□ -0.73
CHD4-204ENST00000535810 ZNF444Q8N0Y2 327 aaPredicted RBP10.52□□□□□ -0.73
CHD4-204ENST00000535810 MB21D1Q8N884 522 aa10.52□□□□□ -0.73
CHD4-204ENST00000535810 ATG4CQ96DT6 458 aa10.52□□□□□ -0.73
CHD4-204ENST00000535810 CEP95Q96GE4 821 aa10.52□□□□□ -0.73
CHD4-204ENST00000535810 DEFB118Q96PH6 123 aa10.52□□□□□ -0.73
CHD4-204ENST00000535810 APBA2Q99767 749 aa10.52□□□□□ -0.73
CHD4-204ENST00000535810 MOV10L1Q9BXT6 1211 aaKnown RBP10.52□□□□□ -0.73
CHD4-204ENST00000535810 SPATC1LQ9H0A9 340 aa10.52□□□□□ -0.73
CHD4-204ENST00000535810 CWC22Q9HCG8 908 aaKnown RBP10.52□□□□□ -0.73
CHD4-204ENST00000535810 FBXO28Q9NVF7 368 aa10.52□□□□□ -0.73
CHD4-204ENST00000535810 NYAP2Q9P242 653 aa10.52□□□□□ -0.73
CHD4-204ENST00000535810 A0A1W2PPC1 479 aa10.51□□□□□ -0.73
CHD4-204ENST00000535810 RAD21O60216 631 aa10.51□□□□□ -0.73
CHD4-204ENST00000535810 SGPL1O95470 568 aa10.51□□□□□ -0.73
CHD4-204ENST00000535810 NDUFB10O96000 172 aa10.51□□□□□ -0.73
CHD4-204ENST00000535810 ZKSCAN1P17029 563 aaPredicted RBP10.51□□□□□ -0.73
CHD4-204ENST00000535810 MAP2K5Q13163 448 aa10.51□□□□□ -0.73
CHD4-204ENST00000535810 GRB14Q14449 540 aa10.51□□□□□ -0.73
CHD4-204ENST00000535810 NBR1Q14596 966 aa10.51□□□□□ -0.73
CHD4-204ENST00000535810 CCL14Q16627 93 aa10.51□□□□□ -0.73
CHD4-204ENST00000535810 FAM47AQ5JRC9 791 aa10.51□□□□□ -0.73
CHD4-204ENST00000535810 FAM83BQ5T0W9 1011 aa10.51□□□□□ -0.73
CHD4-204ENST00000535810 MAP3K21Q5TCX8 1036 aa10.51□□□□□ -0.73
CHD4-204ENST00000535810 UBE2Q1Q7Z7E8 422 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms