RNA–Protein interactions for RNA: ENST00000535728.5

SPOCK3-225, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPOCK3, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-225ENST00000535728 KDM3BQ7LBC6 1761 aa5.4□□□□□ -1.54
SPOCK3-225ENST00000535728 MED1Q15648 1581 aaPredicted RBP5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 A6NHS1 94 aa5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 MGRN1O60291 552 aa5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 MARCH6O60337 910 aa5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 HMMRO75330 724 aa5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 MBD4O95243 580 aa5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 MAP4K4O95819 1239 aaPredicted RBP5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 PENKP01210 267 aaPredicted RBP5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 IDO1P14902 403 aa5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 COPB2P35606 906 aa5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 TXLNAP40222 546 aa5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 PSMD7P51665 324 aa5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 TMEM62Q0P6H9 643 aa5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 BTG3Q14201 252 aaPredicted RBP5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 KIF4BQ2VIQ3 1234 aa5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 ADCK5Q3MIX3 580 aa5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 OLFML1Q6UWY5 402 aa5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 RBM43Q6ZSC3 357 aaKnown RBP5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 TTC30AQ86WT1 665 aa5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 SLF2Q8IX21 1173 aa5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 RILPL2Q969X0 211 aa5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 YIPF3Q9GZM5 350 aa5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 EBF2Q9HAK2 575 aa5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 SENP2Q9HC62 589 aa5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 LUC7LQ9NQ29 371 aaKnown RBP5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 QPCTLQ9NXS2 382 aa5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 TUBGCP4Q9UGJ1 667 aa5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 L1RE1Q9UN81 338 aa5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 SUGT1Q9Y2Z0 365 aa5.4□□□□□ -1.55
SPOCK3-225ENST00000535728 TMEM94Q12767 1356 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 MST1RQ04912 1400 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 A0A087WWV3 80 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 EIF3FO00303 357 aaPredicted RBP5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 TUBBP07437 444 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 PARP1P09874 1014 aaKnown RBP5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 GNAT1P11488 350 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 TRIM21P19474 475 aaKnown RBP5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 AARSP49588 968 aaKnown RBP eCLIP5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 USP11P51784 963 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 GSDMDP57764 484 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 PHEXP78562 749 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 NSUN2Q08J23 767 aaKnown RBP eCLIP5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 ENOX2Q16206 610 aaKnown RBP5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 CAMK4Q16566 473 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 PABPC1LQ4VXU2 614 aaKnown RBP5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 ZFYVE27Q5T4F4 411 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 CLEC4GQ6UXB4 293 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 PACS1Q6VY07 963 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 TRIML1Q8N9V2 468 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 DDX54Q8TDD1 881 aaKnown RBP5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 ANKRD24Q8TF21 1146 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 DDX12PQ92771 950 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 NACC2Q96BF6 587 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 PPP1R14BQ96C90 147 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 PPP1R13BQ96KQ4 1090 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 DUSP9Q99956 384 aaKnown RBP5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 CARD6Q9BX69 1037 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 MAK16Q9BXY0 300 aaKnown RBP5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 VIPAS39Q9H9C1 493 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 PCDH18Q9HCL0 1135 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 SLC40A1Q9NP59 571 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 HYPKQ9NX55 129 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 TRMT1Q9NXH9 659 aaKnown RBP5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 HOOK1Q9UJC3 728 aaKnown RBP5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 GGA2Q9UJY4 613 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 RAB21Q9UL25 225 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 TPCN1Q9ULQ1 816 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 TAF6LQ9Y6J9 622 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 CEMIPQ8WUJ3 1361 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 CAMTA1Q9Y6Y1 1673 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 SIPA1L3O60292 1781 aaPredicted RBP5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 COL18A1P39060 1754 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 STRCQ7RTU9 1775 aa5.39□□□□□ -1.55
SPOCK3-225ENST00000535728 CCDC69A6NI79 296 aa5.38□□□□□ -1.55
SPOCK3-225ENST00000535728 UNCXA6NJT0 531 aa5.38□□□□□ -1.55
SPOCK3-225ENST00000535728 TMEM232C9JQI7 657 aa5.38□□□□□ -1.55
SPOCK3-225ENST00000535728 FANCGO15287 622 aa5.38□□□□□ -1.55
SPOCK3-225ENST00000535728 KCNQ3O43525 872 aa5.38□□□□□ -1.55
SPOCK3-225ENST00000535728 RPSAP08865 295 aaKnown RBP5.38□□□□□ -1.55
SPOCK3-225ENST00000535728 LINGO3P0C6S8 592 aa5.38□□□□□ -1.55
SPOCK3-225ENST00000535728 ATF3P18847 181 aa5.38□□□□□ -1.55
SPOCK3-225ENST00000535728 MCM3P25205 808 aa5.38□□□□□ -1.55
SPOCK3-225ENST00000535728 HOXD10P28358 340 aa5.38□□□□□ -1.55
SPOCK3-225ENST00000535728 GJB2P29033 226 aa5.38□□□□□ -1.55
SPOCK3-225ENST00000535728 CNGA1P29973 690 aa5.38□□□□□ -1.55
SPOCK3-225ENST00000535728 ABL2P42684 1182 aa5.38□□□□□ -1.55
SPOCK3-225ENST00000535728 IRAK1P51617 712 aa5.38□□□□□ -1.55
SPOCK3-225ENST00000535728 ZC3H6P61129 1189 aaKnown RBP5.38□□□□□ -1.55
SPOCK3-225ENST00000535728 HDLBPQ00341 1268 aaKnown RBP5.38□□□□□ -1.55
SPOCK3-225ENST00000535728 PTH1RQ03431 593 aa5.38□□□□□ -1.55
SPOCK3-225ENST00000535728 BLMHQ13867 455 aa5.38□□□□□ -1.55
SPOCK3-225ENST00000535728 TBC1D10BQ4KMP7 808 aaPredicted RBP5.38□□□□□ -1.55
SPOCK3-225ENST00000535728 ANO6Q4KMQ2 910 aa5.38□□□□□ -1.55
SPOCK3-225ENST00000535728 FAAH2Q6GMR7 532 aa5.38□□□□□ -1.55
SPOCK3-225ENST00000535728 CCDC70Q6NSX1 233 aa5.38□□□□□ -1.55
SPOCK3-225ENST00000535728 SLC4A10Q6U841 1118 aa5.38□□□□□ -1.55
SPOCK3-225ENST00000535728 MPRIPQ6WCQ1 1025 aa5.38□□□□□ -1.55
SPOCK3-225ENST00000535728 LCA5Q86VQ0 697 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms