RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 NEFMP07197 916 aa4.81□□□□□ -1.64
SNHG1-202ENST00000535689 ITGB7P26010 798 aa4.81□□□□□ -1.64
SNHG1-202ENST00000535689 ETFBP38117 255 aa4.81□□□□□ -1.64
SNHG1-202ENST00000535689 PMS1P54277 932 aaKnown RBP4.81□□□□□ -1.64
SNHG1-202ENST00000535689 HSPA2P54652 639 aa4.81□□□□□ -1.64
SNHG1-202ENST00000535689 NFIAQ12857 509 aa4.81□□□□□ -1.64
SNHG1-202ENST00000535689 GNPTABQ3T906 1256 aa4.81□□□□□ -1.64
SNHG1-202ENST00000535689 ANKRD39Q53RE8 183 aa4.81□□□□□ -1.64
SNHG1-202ENST00000535689 LARP1BQ659C4 914 aaKnown RBP4.81□□□□□ -1.64
SNHG1-202ENST00000535689 VHLLQ6RSH7 139 aa4.81□□□□□ -1.64
SNHG1-202ENST00000535689 C22orf34Q6ZV56 151 aa4.81□□□□□ -1.64
SNHG1-202ENST00000535689 TTC6Q86TZ1 520 aa4.81□□□□□ -1.64
SNHG1-202ENST00000535689 CCDC144CPQ8IYA2 1237 aa4.81□□□□□ -1.64
SNHG1-202ENST00000535689 ST13P5Q8NFI4 369 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-202ENST00000535689 PMFBP1Q8TBY8 1022 aa4.81□□□□□ -1.64
SNHG1-202ENST00000535689 APBA2Q99767 749 aa4.81□□□□□ -1.64
SNHG1-202ENST00000535689 MKRN2Q9H000 416 aaKnown RBP4.81□□□□□ -1.64
SNHG1-202ENST00000535689 C7orf69Q9H7B7 122 aa4.81□□□□□ -1.64
SNHG1-202ENST00000535689 SUCOQ9UBS9 1254 aaKnown RBP4.81□□□□□ -1.64
SNHG1-202ENST00000535689 LEMD3Q9Y2U8 911 aa4.81□□□□□ -1.64
SNHG1-202ENST00000535689 GOLGA3Q08378 1498 aa4.81□□□□□ -1.64
SNHG1-202ENST00000535689 A0A087WZG4 1122 aa4.8□□□□□ -1.64
SNHG1-202ENST00000535689 A0A1W2PQH9 124 aa4.8□□□□□ -1.64
SNHG1-202ENST00000535689 FAM155AB1AL88 458 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-202ENST00000535689 NOP56O00567 594 aaKnown RBP4.8□□□□□ -1.64
SNHG1-202ENST00000535689 PPM1BO75688 479 aa4.8□□□□□ -1.64
SNHG1-202ENST00000535689 NTF4P34130 210 aa4.8□□□□□ -1.64
SNHG1-202ENST00000535689 CDK8P49336 464 aa4.8□□□□□ -1.64
SNHG1-202ENST00000535689 CLEC16AQ2KHT3 1053 aa4.8□□□□□ -1.64
SNHG1-202ENST00000535689 NOL9Q5SY16 702 aaKnown RBP4.8□□□□□ -1.64
SNHG1-202ENST00000535689 NBPF12Q5TAG4 269 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-202ENST00000535689 SEZ6L2Q6UXD5 910 aa4.8□□□□□ -1.64
SNHG1-202ENST00000535689 UNC5AQ6ZN44 842 aa4.8□□□□□ -1.64
SNHG1-202ENST00000535689 DPH6Q7L8W6 267 aa4.8□□□□□ -1.64
SNHG1-202ENST00000535689 LRRC47Q8N1G4 583 aaKnown RBP4.8□□□□□ -1.64
SNHG1-202ENST00000535689 TOP6BLQ8N6T0 577 aa4.8□□□□□ -1.64
SNHG1-202ENST00000535689 MISP3Q96FF7 219 aa4.8□□□□□ -1.64
SNHG1-202ENST00000535689 KIF2CQ99661 725 aa4.8□□□□□ -1.64
SNHG1-202ENST00000535689 TPSG1Q9NRR2 321 aa4.8□□□□□ -1.64
SNHG1-202ENST00000535689 GPATCH2Q9NW75 528 aa4.8□□□□□ -1.64
SNHG1-202ENST00000535689 TMA7Q9Y2S6 64 aaKnown RBP4.8□□□□□ -1.64
SNHG1-202ENST00000535689 PCDHB12Q9Y5F1 795 aa4.8□□□□□ -1.64
SNHG1-202ENST00000535689 SNX11Q9Y5W9 270 aa4.8□□□□□ -1.64
SNHG1-202ENST00000535689 FANCAO15360 1455 aa4.8□□□□□ -1.64
SNHG1-202ENST00000535689 NEO1Q92859 1461 aa4.8□□□□□ -1.64
SNHG1-202ENST00000535689 RIMS1Q86UR5 1692 aaKnown RBP4.8□□□□□ -1.64
SNHG1-202ENST00000535689 TMEM265A0A087WTH1 108 aa4.79□□□□□ -1.64
SNHG1-202ENST00000535689 CCDC163A0A0D9SF12 145 aa4.79□□□□□ -1.64
SNHG1-202ENST00000535689 ANKRD34BA5PLL1 514 aa4.79□□□□□ -1.64
SNHG1-202ENST00000535689 RAPGEF3O95398 923 aa4.79□□□□□ -1.64
SNHG1-202ENST00000535689 FAM87AP0C7U9 286 aa4.79□□□□□ -1.64
SNHG1-202ENST00000535689 ITGA4P13612 1032 aa4.79□□□□□ -1.64
SNHG1-202ENST00000535689 NOP2P46087 812 aaKnown RBP4.79□□□□□ -1.64
SNHG1-202ENST00000535689 NKG7Q16617 165 aa4.79□□□□□ -1.64
SNHG1-202ENST00000535689 DDR2Q16832 855 aa4.79□□□□□ -1.64
SNHG1-202ENST00000535689 HEATR6Q6AI08 1181 aaKnown RBP4.79□□□□□ -1.64
SNHG1-202ENST00000535689 FAM178BQ8IXR5 827 aa4.79□□□□□ -1.64
SNHG1-202ENST00000535689 STK11IPQ8N1F8 1099 aa4.79□□□□□ -1.64
SNHG1-202ENST00000535689 CCDC120Q96HB5 630 aa4.79□□□□□ -1.64
SNHG1-202ENST00000535689 KREMEN1Q96MU8 473 aa4.79□□□□□ -1.64
SNHG1-202ENST00000535689 PSMG3-AS1Q96PY0 264 aa4.79□□□□□ -1.64
SNHG1-202ENST00000535689 SRPK1Q96SB4 655 aaKnown RBP4.79□□□□□ -1.64
SNHG1-202ENST00000535689 DNAJC2Q99543 621 aaKnown RBP4.79□□□□□ -1.64
SNHG1-202ENST00000535689 DUSP23Q9BVJ7 150 aa4.79□□□□□ -1.64
SNHG1-202ENST00000535689 FBRSQ9HAH7 460 aa4.79□□□□□ -1.64
SNHG1-202ENST00000535689 FBXL21Q9UKT6 434 aa4.79□□□□□ -1.64
SNHG1-202ENST00000535689 ZNF214Q9UL59 606 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-202ENST00000535689 PTPRTO14522 1441 aa4.79□□□□□ -1.64
SNHG1-202ENST00000535689 MADDQ8WXG6 1647 aa4.79□□□□□ -1.64
SNHG1-202ENST00000535689 UGGT2Q9NYU1 1516 aa4.78□□□□□ -1.64
SNHG1-202ENST00000535689 PREX1Q8TCU6 1659 aa4.78□□□□□ -1.64
SNHG1-202ENST00000535689 SSU72P8A0A1W2PR75 194 aa4.78□□□□□ -1.64
SNHG1-202ENST00000535689 PLEKHD1A6NEE1 506 aa4.78□□□□□ -1.64
SNHG1-202ENST00000535689 UPK3BL1B0FP48 263 aa4.78□□□□□ -1.64
SNHG1-202ENST00000535689 UPK3BL2E5RIL1 263 aa4.78□□□□□ -1.64
SNHG1-202ENST00000535689 K7ELQ4 463 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-202ENST00000535689 CYP26A1O43174 497 aa4.78□□□□□ -1.64
SNHG1-202ENST00000535689 KLF4O43474 513 aa4.78□□□□□ -1.64
SNHG1-202ENST00000535689 FSTP19883 344 aa4.78□□□□□ -1.64
SNHG1-202ENST00000535689 CLCN7P51798 805 aa4.78□□□□□ -1.64
SNHG1-202ENST00000535689 RASGRF1Q13972 1273 aa4.78□□□□□ -1.64
SNHG1-202ENST00000535689 RSPO4Q2I0M5 234 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-202ENST00000535689 CWF19L1Q69YN2 538 aaKnown RBP4.78□□□□□ -1.64
SNHG1-202ENST00000535689 THAP5Q7Z6K1 395 aa4.78□□□□□ -1.64
SNHG1-202ENST00000535689 ADAT2Q7Z6V5 191 aaKnown RBP4.78□□□□□ -1.64
SNHG1-202ENST00000535689 MFSD4AQ8N468 514 aa4.78□□□□□ -1.64
SNHG1-202ENST00000535689 XAGE3Q8WTP9 111 aa4.78□□□□□ -1.64
SNHG1-202ENST00000535689 SGSM3Q96HU1 749 aa4.78□□□□□ -1.64
SNHG1-202ENST00000535689 SLC6A18Q96N87 628 aa4.78□□□□□ -1.64
SNHG1-202ENST00000535689 SLC9A7Q96T83 725 aa4.78□□□□□ -1.64
SNHG1-202ENST00000535689 ZSWIM4Q9H7M6 989 aa4.78□□□□□ -1.64
SNHG1-202ENST00000535689 C1GALT1Q9NS00 363 aa4.78□□□□□ -1.64
SNHG1-202ENST00000535689 PIM2Q9P1W9 311 aa4.78□□□□□ -1.64
SNHG1-202ENST00000535689 WHRNQ9P202 907 aa4.78□□□□□ -1.64
SNHG1-202ENST00000535689 LRP2BPQ9P2M1 347 aa4.78□□□□□ -1.64
SNHG1-202ENST00000535689 DIS3Q9Y2L1 958 aaKnown RBP4.78□□□□□ -1.64
SNHG1-202ENST00000535689 SF3B6Q9Y3B4 125 aaKnown RBP4.78□□□□□ -1.64
SNHG1-202ENST00000535689 AKNAQ7Z591 1439 aa4.78□□□□□ -1.64
SNHG1-202ENST00000535689 DISP1Q96F81 1524 aa4.77□□□□□ -1.65
SNHG1-202ENST00000535689 MAGI2Q86UL8 1455 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms