RNA–Protein interactions for RNA: ENST00000535664.5

MSRB3-206, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-206ENST00000535664 TNPO2O14787 897 aaKnown RBP17.04■□□□□ 0.32
MSRB3-206ENST00000535664 MCM2P49736 904 aa17.04■□□□□ 0.32
MSRB3-206ENST00000535664 HERVK_113P62684 666 aa17.04■□□□□ 0.32
MSRB3-206ENST00000535664 ICA1Q05084 483 aa17.04■□□□□ 0.32
MSRB3-206ENST00000535664 SLC9C1Q4G0N8 1177 aa17.04■□□□□ 0.32
MSRB3-206ENST00000535664 RRP12Q5JTH9 1297 aaKnown RBP17.04■□□□□ 0.32
MSRB3-206ENST00000535664 CATSPERGQ6ZRH7 1159 aa17.04■□□□□ 0.32
MSRB3-206ENST00000535664 HSCBQ8IWL3 235 aa17.04■□□□□ 0.32
MSRB3-206ENST00000535664 RAET1EQ8TD07 263 aa17.04■□□□□ 0.32
MSRB3-206ENST00000535664 ESR2Q92731 530 aa17.04■□□□□ 0.32
MSRB3-206ENST00000535664 TRIM47Q96LD4 638 aa17.04■□□□□ 0.32
MSRB3-206ENST00000535664 MTA3Q9BTC8 594 aa17.04■□□□□ 0.32
MSRB3-206ENST00000535664 LRRC2Q9BYS8 371 aa17.04■□□□□ 0.32
MSRB3-206ENST00000535664 GPHNQ9NQX3 736 aaPredicted RBP17.04■□□□□ 0.32
MSRB3-206ENST00000535664 SYNPO2Q9UMS6 1093 aa17.04■□□□□ 0.32
MSRB3-206ENST00000535664 TMX2Q9Y320 296 aa17.04■□□□□ 0.32
MSRB3-206ENST00000535664 K7ELQ4 463 aaPredicted RBP17.03■□□□□ 0.32
MSRB3-206ENST00000535664 SH2B2O14492 632 aaPredicted RBP17.03■□□□□ 0.32
MSRB3-206ENST00000535664 AKR1B1P15121 316 aa17.03■□□□□ 0.32
MSRB3-206ENST00000535664 CAPN2P17655 700 aa17.03■□□□□ 0.32
MSRB3-206ENST00000535664 CCNA1P78396 465 aa17.03■□□□□ 0.32
MSRB3-206ENST00000535664 BECN1Q14457 450 aa17.03■□□□□ 0.32
MSRB3-206ENST00000535664 SHROOM1Q2M3G4 852 aaPredicted RBP17.03■□□□□ 0.32
MSRB3-206ENST00000535664 LBX2Q6XYB7 198 aa17.03■□□□□ 0.32
MSRB3-206ENST00000535664 CCAR1Q8IX12 1150 aaKnown RBP17.03■□□□□ 0.32
MSRB3-206ENST00000535664 ACER1Q8TDN7 264 aa17.03■□□□□ 0.32
MSRB3-206ENST00000535664 IGDCC4Q8TDY8 1250 aa17.03■□□□□ 0.32
MSRB3-206ENST00000535664 P2RX7Q99572 595 aaKnown RBP17.03■□□□□ 0.32
MSRB3-206ENST00000535664 TOMM22Q9NS69 142 aa17.03■□□□□ 0.32
MSRB3-206ENST00000535664 RABGAP1Q9Y3P9 1069 aa17.03■□□□□ 0.32
MSRB3-206ENST00000535664 PLIN4Q96Q06 1357 aa17.02■□□□□ 0.32
MSRB3-206ENST00000535664 MYPNQ86TC9 1320 aa17.02■□□□□ 0.32
MSRB3-206ENST00000535664 LARGE1O95461 756 aa17.02■□□□□ 0.32
MSRB3-206ENST00000535664 VCAM1P19320 739 aa17.02■□□□□ 0.32
MSRB3-206ENST00000535664 MAPK4P31152 587 aa17.02■□□□□ 0.32
MSRB3-206ENST00000535664 EVCP57679 992 aa17.02■□□□□ 0.32
MSRB3-206ENST00000535664 IRF5Q13568 498 aa17.02■□□□□ 0.32
MSRB3-206ENST00000535664 TMEM87BQ96K49 555 aa17.02■□□□□ 0.32
MSRB3-206ENST00000535664 TMEM106CQ9BVX2 250 aa17.02■□□□□ 0.32
MSRB3-206ENST00000535664 ARHGAP39Q9C0H5 1083 aa17.02■□□□□ 0.32
MSRB3-206ENST00000535664 VCPKMTQ9H867 229 aa17.02■□□□□ 0.32
MSRB3-206ENST00000535664 GOPCQ9HD26 462 aa17.02■□□□□ 0.32
MSRB3-206ENST00000535664 TPCN1Q9ULQ1 816 aa17.02■□□□□ 0.32
MSRB3-206ENST00000535664 RANBP6O60518 1105 aaKnown RBP17.01■□□□□ 0.31
MSRB3-206ENST00000535664 COG2Q14746 738 aa17.01■□□□□ 0.31
MSRB3-206ENST00000535664 ANKRD1Q15327 319 aa17.01■□□□□ 0.31
MSRB3-206ENST00000535664 SEC23AQ15436 765 aa17.01■□□□□ 0.31
MSRB3-206ENST00000535664 ZYXQ15942 572 aaKnown RBP17.01■□□□□ 0.31
MSRB3-206ENST00000535664 FAM47AQ5JRC9 791 aa17.01■□□□□ 0.31
MSRB3-206ENST00000535664 SLAIN1Q8ND83 568 aa17.01■□□□□ 0.31
MSRB3-206ENST00000535664 PXYLP1Q8TE99 480 aa17.01■□□□□ 0.31
MSRB3-206ENST00000535664 BRF1Q92994 677 aa17.01■□□□□ 0.31
MSRB3-206ENST00000535664 TMX3Q96JJ7 454 aa17.01■□□□□ 0.31
MSRB3-206ENST00000535664 LARP6Q9BRS8 491 aaKnown RBP17.01■□□□□ 0.31
MSRB3-206ENST00000535664 LY9Q9HBG7 655 aa17.01■□□□□ 0.31
MSRB3-206ENST00000535664 SENP2Q9HC62 589 aa17.01■□□□□ 0.31
MSRB3-206ENST00000535664 NYAP2Q9P242 653 aa17.01■□□□□ 0.31
MSRB3-206ENST00000535664 LIMCH1Q9UPQ0 1083 aa17.01■□□□□ 0.31
MSRB3-206ENST00000535664 PTCH2Q9Y6C5 1203 aa17.01■□□□□ 0.31
MSRB3-206ENST00000535664 MYH8P13535 1937 aa17.01■□□□□ 0.31
MSRB3-206ENST00000535664 A0A1W2PRG0 241 aa17■□□□□ 0.31
MSRB3-206ENST00000535664 WDR46O15213 610 aaKnown RBP17■□□□□ 0.31
MSRB3-206ENST00000535664 EEF2P13639 858 aaKnown RBP17■□□□□ 0.31
MSRB3-206ENST00000535664 SLC4A3P48751 1232 aa17■□□□□ 0.31
MSRB3-206ENST00000535664 ST3GAL1Q11201 340 aa17■□□□□ 0.31
MSRB3-206ENST00000535664 NOL8Q76FK4 1167 aaKnown RBP17■□□□□ 0.31
MSRB3-206ENST00000535664 SGMS1Q86VZ5 419 aa17■□□□□ 0.31
MSRB3-206ENST00000535664 MB21D1Q8N884 522 aa17■□□□□ 0.31
MSRB3-206ENST00000535664 GNL3Q9BVP2 549 aaKnown RBP eCLIP17■□□□□ 0.31
MSRB3-206ENST00000535664 RPAP3Q9H6T3 665 aaPredicted RBP17■□□□□ 0.31
MSRB3-206ENST00000535664 TCP11L1Q9NUJ3 509 aa17■□□□□ 0.31
MSRB3-206ENST00000535664 TNKSO95271 1327 aa16.99■□□□□ 0.31
MSRB3-206ENST00000535664 GRK4P32298 578 aa16.99■□□□□ 0.31
MSRB3-206ENST00000535664 LIFRP42702 1097 aa16.99■□□□□ 0.31
MSRB3-206ENST00000535664 NOVP48745 357 aa16.99■□□□□ 0.31
MSRB3-206ENST00000535664 UBXN2AP68543 259 aa16.99■□□□□ 0.31
MSRB3-206ENST00000535664 TFAP4Q01664 338 aa16.99■□□□□ 0.31
MSRB3-206ENST00000535664 MLLT1Q03111 559 aaPredicted RBP16.99■□□□□ 0.31
MSRB3-206ENST00000535664 APOBRQ0VD83 1088 aa16.99■□□□□ 0.31
MSRB3-206ENST00000535664 CUL4AQ13619 759 aa16.99■□□□□ 0.31
MSRB3-206ENST00000535664 ME3Q16798 604 aa16.99■□□□□ 0.31
MSRB3-206ENST00000535664 SIAH1Q8IUQ4 282 aa16.99■□□□□ 0.31
MSRB3-206ENST00000535664 NEDD1Q8NHV4 660 aa16.99■□□□□ 0.31
MSRB3-206ENST00000535664 ZNF333Q96JL9 665 aa16.99■□□□□ 0.31
MSRB3-206ENST00000535664 ZSCAN10Q96SZ4 725 aaPredicted RBP16.99■□□□□ 0.31
MSRB3-206ENST00000535664 ZKSCAN3Q9BRR0 538 aa16.99■□□□□ 0.31
MSRB3-206ENST00000535664 IL17RBQ9NRM6 502 aa16.99■□□□□ 0.31
MSRB3-206ENST00000535664 RBPJLQ9UBG7 517 aa16.99■□□□□ 0.31
MSRB3-206ENST00000535664 IGKV6D-41A0A0C4DH26 115 aa16.98■□□□□ 0.31
MSRB3-206ENST00000535664 TSPY2A6NKD2 308 aa16.98■□□□□ 0.31
MSRB3-206ENST00000535664 IFIT3O14879 490 aaKnown RBP16.98■□□□□ 0.31
MSRB3-206ENST00000535664 NMT2O60551 498 aa16.98■□□□□ 0.31
MSRB3-206ENST00000535664 TSPY3P0CV98 308 aa16.98■□□□□ 0.31
MSRB3-206ENST00000535664 TSPY8P0CW00 308 aa16.98■□□□□ 0.31
MSRB3-206ENST00000535664 ERVK-9P63128 1117 aa16.98■□□□□ 0.31
MSRB3-206ENST00000535664 ERVK-24P63145 666 aa16.98■□□□□ 0.31
MSRB3-206ENST00000535664 CAP1Q01518 475 aa16.98■□□□□ 0.31
MSRB3-206ENST00000535664 ATP2B2Q01814 1243 aa16.98■□□□□ 0.31
MSRB3-206ENST00000535664 TMEM67Q5HYA8 995 aa16.98■□□□□ 0.31
MSRB3-206ENST00000535664 RCSD1Q6JBY9 416 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms