RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 VPS53Q5VIR6 699 aa11.23□□□□□ -0.61
CDCA3-204ENST00000535406 WDR78Q5VTH9 848 aa11.23□□□□□ -0.61
CDCA3-204ENST00000535406 GPR142Q7Z601 462 aa11.23□□□□□ -0.61
CDCA3-204ENST00000535406 NKX2-3Q8TAU0 364 aa11.23□□□□□ -0.61
CDCA3-204ENST00000535406 NUDT12Q9BQG2 462 aa11.23□□□□□ -0.61
CDCA3-204ENST00000535406 HOXC10Q9NYD6 342 aa11.23□□□□□ -0.61
CDCA3-204ENST00000535406 BTBD7Q9P203 1132 aa11.23□□□□□ -0.61
CDCA3-204ENST00000535406 GJD2Q9UKL4 321 aa11.23□□□□□ -0.61
CDCA3-204ENST00000535406 CCDC171Q6TFL3 1326 aa11.22□□□□□ -0.61
CDCA3-204ENST00000535406 TSPY3P0CV98 308 aa11.22□□□□□ -0.61
CDCA3-204ENST00000535406 TSPY8P0CW00 308 aa11.22□□□□□ -0.61
CDCA3-204ENST00000535406 CYP2B6P20813 491 aa11.22□□□□□ -0.61
CDCA3-204ENST00000535406 PLEKHH3Q7Z736 793 aa11.22□□□□□ -0.61
CDCA3-204ENST00000535406 ZNF589Q86UQ0 364 aaPredicted RBP11.22□□□□□ -0.61
CDCA3-204ENST00000535406 MB21D1Q8N884 522 aa11.22□□□□□ -0.61
CDCA3-204ENST00000535406 APBA2Q99767 749 aa11.22□□□□□ -0.61
CDCA3-204ENST00000535406 UNC93B1Q9H1C4 597 aa11.22□□□□□ -0.61
CDCA3-204ENST00000535406 NYAP2Q9P242 653 aa11.22□□□□□ -0.61
CDCA3-204ENST00000535406 IVNS1ABPQ9Y6Y0 642 aa11.22□□□□□ -0.61
CDCA3-204ENST00000535406 PDE4DIPQ5VU43 2346 aa11.22□□□□□ -0.61
CDCA3-204ENST00000535406 ZMYM6O95789 1325 aa11.21□□□□□ -0.61
CDCA3-204ENST00000535406 IGKV6D-41A0A0C4DH26 115 aa11.21□□□□□ -0.61
CDCA3-204ENST00000535406 TTLL1O95922 423 aa11.21□□□□□ -0.61
CDCA3-204ENST00000535406 GJB1P08034 283 aa11.21□□□□□ -0.61
CDCA3-204ENST00000535406 XRCC5P13010 732 aaKnown RBP11.21□□□□□ -0.61
CDCA3-204ENST00000535406 SDSP20132 328 aa11.21□□□□□ -0.61
CDCA3-204ENST00000535406 RGS2P41220 211 aa11.21□□□□□ -0.61
CDCA3-204ENST00000535406 GJA8P48165 433 aa11.21□□□□□ -0.61
CDCA3-204ENST00000535406 MFAP1P55081 439 aaKnown RBP11.21□□□□□ -0.61
CDCA3-204ENST00000535406 CTDSPL2Q05D32 466 aa11.21□□□□□ -0.61
CDCA3-204ENST00000535406 MORN1Q5T089 497 aa11.21□□□□□ -0.61
CDCA3-204ENST00000535406 FAM83BQ5T0W9 1011 aa11.21□□□□□ -0.61
CDCA3-204ENST00000535406 NEDD1Q8NHV4 660 aa11.21□□□□□ -0.61
CDCA3-204ENST00000535406 TRIB2Q92519 343 aa11.21□□□□□ -0.61
CDCA3-204ENST00000535406 SHISA4Q96DD7 197 aa11.21□□□□□ -0.61
CDCA3-204ENST00000535406 ATG4CQ96DT6 458 aa11.21□□□□□ -0.61
CDCA3-204ENST00000535406 CEP95Q96GE4 821 aa11.21□□□□□ -0.61
CDCA3-204ENST00000535406 SPATC1LQ9H0A9 340 aa11.21□□□□□ -0.61
CDCA3-204ENST00000535406 DIAPH3Q9NSV4 1193 aa11.21□□□□□ -0.61
CDCA3-204ENST00000535406 COL11A1P12107 1806 aaPredicted RBP11.21□□□□□ -0.62
CDCA3-204ENST00000535406 ZNF236Q9UL36 1845 aa11.21□□□□□ -0.62
CDCA3-204ENST00000535406 TSPY2A6NKD2 308 aa11.2□□□□□ -0.62
CDCA3-204ENST00000535406 HIP1O00291 1037 aa11.2□□□□□ -0.62
CDCA3-204ENST00000535406 NDUFB10O96000 172 aa11.2□□□□□ -0.62
CDCA3-204ENST00000535406 HSPD1P10809 573 aaKnown RBP11.2□□□□□ -0.62
CDCA3-204ENST00000535406 ZKSCAN1P17029 563 aaPredicted RBP11.2□□□□□ -0.62
CDCA3-204ENST00000535406 TFAP4Q01664 338 aa11.2□□□□□ -0.62
CDCA3-204ENST00000535406 MAP2K5Q13163 448 aa11.2□□□□□ -0.62
CDCA3-204ENST00000535406 PLS1Q14651 629 aa11.2□□□□□ -0.62
CDCA3-204ENST00000535406 ALX1Q15699 326 aa11.2□□□□□ -0.62
CDCA3-204ENST00000535406 FAM47AQ5JRC9 791 aa11.2□□□□□ -0.62
CDCA3-204ENST00000535406 TRMT44Q8IYL2 757 aaKnown RBP11.2□□□□□ -0.62
CDCA3-204ENST00000535406 U2AF1L4Q8WU68 220 aaKnown RBP11.2□□□□□ -0.62
CDCA3-204ENST00000535406 USP6NLQ92738 828 aa11.2□□□□□ -0.62
CDCA3-204ENST00000535406 MOV10L1Q9BXT6 1211 aaKnown RBP11.2□□□□□ -0.62
CDCA3-204ENST00000535406 PAK6Q9NQU5 681 aaPredicted RBP11.2□□□□□ -0.62
CDCA3-204ENST00000535406 FBXO28Q9NVF7 368 aa11.2□□□□□ -0.62
CDCA3-204ENST00000535406 MTMR4Q9NYA4 1195 aa11.2□□□□□ -0.62
CDCA3-204ENST00000535406 CLIP2Q9UDT6 1046 aa11.2□□□□□ -0.62
CDCA3-204ENST00000535406 ANAPC4Q9UJX5 808 aa11.2□□□□□ -0.62
CDCA3-204ENST00000535406 PPP1R9AQ9ULJ8 1098 aa11.2□□□□□ -0.62
CDCA3-204ENST00000535406 SYNPO2Q9UMS6 1093 aa11.2□□□□□ -0.62
CDCA3-204ENST00000535406 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.2□□□□□ -0.62
CDCA3-204ENST00000535406 LAMA4Q16363 1823 aa11.19□□□□□ -0.62
CDCA3-204ENST00000535406 SLC15A5A6NIM6 579 aa11.19□□□□□ -0.62
CDCA3-204ENST00000535406 F5H6K3 240 aa11.19□□□□□ -0.62
CDCA3-204ENST00000535406 FGAP02671 866 aa11.19□□□□□ -0.62
CDCA3-204ENST00000535406 PYGBP11216 843 aa11.19□□□□□ -0.62
CDCA3-204ENST00000535406 ERCC3P19447 782 aa11.19□□□□□ -0.62
CDCA3-204ENST00000535406 PTPREP23469 700 aa11.19□□□□□ -0.62
CDCA3-204ENST00000535406 PDE4AP27815 886 aa11.19□□□□□ -0.62
CDCA3-204ENST00000535406 KLRC3Q07444 240 aa11.19□□□□□ -0.62
CDCA3-204ENST00000535406 TRIM32Q13049 653 aa11.19□□□□□ -0.62
CDCA3-204ENST00000535406 GRB14Q14449 540 aa11.19□□□□□ -0.62
CDCA3-204ENST00000535406 PPP4R3BQ5MIZ7 849 aa11.19□□□□□ -0.62
CDCA3-204ENST00000535406 CWC27Q6UX04 472 aaKnown RBP11.19□□□□□ -0.62
CDCA3-204ENST00000535406 LRRC47Q8N1G4 583 aaKnown RBP11.19□□□□□ -0.62
CDCA3-204ENST00000535406 SHCBP1Q8NEM2 672 aa11.19□□□□□ -0.62
CDCA3-204ENST00000535406 MKL1Q969V6 931 aa11.19□□□□□ -0.62
CDCA3-204ENST00000535406 DEFB118Q96PH6 123 aa11.19□□□□□ -0.62
CDCA3-204ENST00000535406 NUP88Q99567 741 aaPredicted RBP11.19□□□□□ -0.62
CDCA3-204ENST00000535406 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.19□□□□□ -0.62
CDCA3-204ENST00000535406 TOMM22Q9NS69 142 aa11.19□□□□□ -0.62
CDCA3-204ENST00000535406 RPTORQ8N122 1335 aa11.19□□□□□ -0.62
CDCA3-204ENST00000535406 VWA5AO00534 786 aa11.18□□□□□ -0.62
CDCA3-204ENST00000535406 RANBP6O60518 1105 aaKnown RBP11.18□□□□□ -0.62
CDCA3-204ENST00000535406 SGPL1O95470 568 aa11.18□□□□□ -0.62
CDCA3-204ENST00000535406 PRKAR2AP13861 404 aaKnown RBP11.18□□□□□ -0.62
CDCA3-204ENST00000535406 TMEM132BQ14DG7 1078 aa11.18□□□□□ -0.62
CDCA3-204ENST00000535406 TTC22Q5TAA0 569 aa11.18□□□□□ -0.62
CDCA3-204ENST00000535406 PRPF38BQ5VTL8 546 aaKnown RBP11.18□□□□□ -0.62
CDCA3-204ENST00000535406 NCAPG2Q86XI2 1143 aa11.18□□□□□ -0.62
CDCA3-204ENST00000535406 GMCL1P1Q8NEA9 526 aa11.18□□□□□ -0.62
CDCA3-204ENST00000535406 SLF1Q9BQI6 1058 aa11.18□□□□□ -0.62
CDCA3-204ENST00000535406 MROH8Q9H579 483 aa11.18□□□□□ -0.62
CDCA3-204ENST00000535406 HMX1Q9NP08 348 aaPredicted RBP11.18□□□□□ -0.62
CDCA3-204ENST00000535406 ADAMTS5Q9UNA0 930 aa11.18□□□□□ -0.62
CDCA3-204ENST00000535406 STX8Q9UNK0 236 aa11.18□□□□□ -0.62
CDCA3-204ENST00000535406 STRNO43815 780 aa11.17□□□□□ -0.62
CDCA3-204ENST00000535406 ORC4O43929 436 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms