RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 KANSL2Q9H9L4 492 aa19.7■□□□□ 0.74
VPS51-216ENST00000534591 RTEL1Q9NZ71 1219 aa19.7■□□□□ 0.74
VPS51-216ENST00000534591 SCAF8Q9UPN6 1271 aaKnown RBP19.7■□□□□ 0.74
VPS51-216ENST00000534591 KIF28PB7ZC32 967 aa19.69■□□□□ 0.74
VPS51-216ENST00000534591 SCG2P13521 617 aa19.69■□□□□ 0.74
VPS51-216ENST00000534591 PFKFB3Q16875 520 aaPredicted RBP19.69■□□□□ 0.74
VPS51-216ENST00000534591 CAVIN1Q6NZI2 390 aaKnown RBP19.69■□□□□ 0.74
VPS51-216ENST00000534591 TMEM179Q6ZVK1 233 aa19.69■□□□□ 0.74
VPS51-216ENST00000534591 FAM177A1Q8N128 213 aaPredicted RBP19.69■□□□□ 0.74
VPS51-216ENST00000534591 STAG2Q8N3U4 1231 aa19.69■□□□□ 0.74
VPS51-216ENST00000534591 SPZ1Q9BXG8 430 aa19.69■□□□□ 0.74
VPS51-216ENST00000534591 VEZTQ9HBM0 779 aa19.69■□□□□ 0.74
VPS51-216ENST00000534591 NYAP2Q9P242 653 aa19.69■□□□□ 0.74
VPS51-216ENST00000534591 CLIP2Q9UDT6 1046 aa19.69■□□□□ 0.74
VPS51-216ENST00000534591 TNNI2P48788 182 aa19.68■□□□□ 0.74
VPS51-216ENST00000534591 NBPF9Q3BBW0 867 aa19.68■□□□□ 0.74
VPS51-216ENST00000534591 ASPRV1Q53RT3 343 aa19.68■□□□□ 0.74
VPS51-216ENST00000534591 USP28Q96RU2 1077 aa19.68■□□□□ 0.74
VPS51-216ENST00000534591 THSD7BQ9C0I4 1608 aa19.67■□□□□ 0.74
VPS51-216ENST00000534591 GOLGA6L4A6NEF3 574 aa19.67■□□□□ 0.74
VPS51-216ENST00000534591 KLRF2D3W0D1 207 aa19.67■□□□□ 0.74
VPS51-216ENST00000534591 TBC1D12O60347 775 aa19.67■□□□□ 0.74
VPS51-216ENST00000534591 YEATS4O95619 227 aa19.67■□□□□ 0.74
VPS51-216ENST00000534591 SNHG28P0DPA3 235 aa19.67■□□□□ 0.74
VPS51-216ENST00000534591 ABCB5Q2M3G0 1257 aa19.67■□□□□ 0.74
VPS51-216ENST00000534591 ANGEL2Q5VTE6 544 aaKnown RBP19.67■□□□□ 0.74
VPS51-216ENST00000534591 DIS3L2Q8IYB7 885 aaKnown RBP19.67■□□□□ 0.74
VPS51-216ENST00000534591 MKL1Q969V6 931 aa19.67■□□□□ 0.74
VPS51-216ENST00000534591 PHF20Q9BVI0 1012 aa19.67■□□□□ 0.74
VPS51-216ENST00000534591 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.67■□□□□ 0.74
VPS51-216ENST00000534591 SH3GLB2Q9NR46 395 aa19.67■□□□□ 0.74
VPS51-216ENST00000534591 POLR3EQ9NVU0 708 aa19.67■□□□□ 0.74
VPS51-216ENST00000534591 FAM196BA6NMK8 535 aa19.66■□□□□ 0.74
VPS51-216ENST00000534591 PDHBP11177 359 aa19.66■□□□□ 0.74
VPS51-216ENST00000534591 TNFAIP1Q13829 316 aa19.66■□□□□ 0.74
VPS51-216ENST00000534591 KRT26Q7Z3Y9 468 aa19.66■□□□□ 0.74
VPS51-216ENST00000534591 NOSTRINQ8IVI9 506 aa19.66■□□□□ 0.74
VPS51-216ENST00000534591 JMYQ8N9B5 988 aa19.66■□□□□ 0.74
VPS51-216ENST00000534591 ZNF408Q9H9D4 720 aa19.66■□□□□ 0.74
VPS51-216ENST00000534591 BRMS1Q9HCU9 246 aa19.66■□□□□ 0.74
VPS51-216ENST00000534591 CABP5Q9NP86 173 aa19.66■□□□□ 0.74
VPS51-216ENST00000534591 KCNJ14Q9UNX9 436 aa19.66■□□□□ 0.74
VPS51-216ENST00000534591 CELF2O95319 508 aaKnown RBP19.66■□□□□ 0.74
VPS51-216ENST00000534591 NASPP49321 788 aaPredicted RBP19.66■□□□□ 0.74
VPS51-216ENST00000534591 VPS54Q9P1Q0 977 aa19.66■□□□□ 0.74
VPS51-216ENST00000534591 ABT1Q9ULW3 272 aaKnown RBP19.66■□□□□ 0.74
VPS51-216ENST00000534591 SYNPO2Q9UMS6 1093 aa19.66■□□□□ 0.74
VPS51-216ENST00000534591 MTMR7Q9Y216 660 aa19.66■□□□□ 0.74
VPS51-216ENST00000534591 hCG_1642624A0A1W2PR95 340 aa19.65■□□□□ 0.74
VPS51-216ENST00000534591 USP17L5A8MUK1 530 aa19.65■□□□□ 0.74
VPS51-216ENST00000534591 BTBD18B2RXH4 712 aa19.65■□□□□ 0.74
VPS51-216ENST00000534591 USP17L2Q6R6M4 530 aa19.65■□□□□ 0.74
VPS51-216ENST00000534591 LRRC47Q8N1G4 583 aaKnown RBP19.65■□□□□ 0.74
VPS51-216ENST00000534591 KCNG4Q8TDN1 519 aa19.65■□□□□ 0.74
VPS51-216ENST00000534591 DCPSQ96C86 337 aaKnown RBP19.65■□□□□ 0.74
VPS51-216ENST00000534591 ISY1Q9ULR0 285 aaKnown RBP19.65■□□□□ 0.74
VPS51-216ENST00000534591 MYH4Q9Y623 1939 aa19.64■□□□□ 0.73
VPS51-216ENST00000534591 SLURP2P0DP57 97 aa19.64■□□□□ 0.73
VPS51-216ENST00000534591 CALML3P27482 149 aa19.64■□□□□ 0.73
VPS51-216ENST00000534591 KRT2P35908 639 aa19.64■□□□□ 0.73
VPS51-216ENST00000534591 CEBPZQ03701 1054 aaKnown RBP19.64■□□□□ 0.73
VPS51-216ENST00000534591 GPATCH4Q5T3I0 446 aaKnown RBP19.64■□□□□ 0.73
VPS51-216ENST00000534591 ANO1Q5XXA6 986 aa19.64■□□□□ 0.73
VPS51-216ENST00000534591 LINC00301Q8NCQ3 95 aa19.64■□□□□ 0.73
VPS51-216ENST00000534591 TMEM63CQ9P1W3 806 aa19.64■□□□□ 0.73
VPS51-216ENST00000534591 RASSF10A6NK89 507 aa19.63■□□□□ 0.73
VPS51-216ENST00000534591 CYTH3O43739 400 aa19.63■□□□□ 0.73
VPS51-216ENST00000534591 GOLGA8HP0CJ92 632 aa19.63■□□□□ 0.73
VPS51-216ENST00000534591 EEF2P13639 858 aaKnown RBP19.63■□□□□ 0.73
VPS51-216ENST00000534591 ZNF445P59923 1031 aa19.63■□□□□ 0.73
VPS51-216ENST00000534591 MAP3K10Q02779 954 aa19.63■□□□□ 0.73
VPS51-216ENST00000534591 ICA1Q05084 483 aa19.63■□□□□ 0.73
VPS51-216ENST00000534591 ZNF543Q08ER8 600 aa19.63■□□□□ 0.73
VPS51-216ENST00000534591 SEPT2Q15019 361 aa19.63■□□□□ 0.73
VPS51-216ENST00000534591 STK38Q15208 465 aa19.63■□□□□ 0.73
VPS51-216ENST00000534591 SLC35G1Q2M3R5 365 aa19.63■□□□□ 0.73
VPS51-216ENST00000534591 ZSCAN23Q3MJ62 389 aa19.63■□□□□ 0.73
VPS51-216ENST00000534591 CLEC10AQ8IUN9 316 aa19.63■□□□□ 0.73
VPS51-216ENST00000534591 SHISA4Q96DD7 197 aa19.63■□□□□ 0.73
VPS51-216ENST00000534591 RRP36Q96EU6 259 aaKnown RBP19.63■□□□□ 0.73
VPS51-216ENST00000534591 FTOQ9C0B1 505 aaKnown RBP eCLIP19.63■□□□□ 0.73
VPS51-216ENST00000534591 TMEM39BQ9GZU3 492 aa19.63■□□□□ 0.73
VPS51-216ENST00000534591 RIOX1Q9H6W3 641 aa19.63■□□□□ 0.73
VPS51-216ENST00000534591 BAZ2BQ9UIF8 2168 aaKnown RBP19.63■□□□□ 0.73
VPS51-216ENST00000534591 VEGFBP49765 207 aa19.62■□□□□ 0.73
VPS51-216ENST00000534591 ATP2B2Q01814 1243 aa19.62■□□□□ 0.73
VPS51-216ENST00000534591 RILPL1Q5EBL4 403 aa19.62■□□□□ 0.73
VPS51-216ENST00000534591 GALNT17Q6IS24 598 aa19.62■□□□□ 0.73
VPS51-216ENST00000534591 CCDC148Q8NFR7 591 aa19.62■□□□□ 0.73
VPS51-216ENST00000534591 DCAF4Q8WV16 495 aa19.62■□□□□ 0.73
VPS51-216ENST00000534591 PGBD1Q96JS3 809 aa19.62■□□□□ 0.73
VPS51-216ENST00000534591 CLIC4Q9Y696 253 aa19.62■□□□□ 0.73
VPS51-216ENST00000534591 GDF11O95390 407 aa19.61■□□□□ 0.73
VPS51-216ENST00000534591 GH2P01242 217 aa19.61■□□□□ 0.73
VPS51-216ENST00000534591 NLRP5P59047 1200 aa19.61■□□□□ 0.73
VPS51-216ENST00000534591 RASA3Q14644 834 aa19.61■□□□□ 0.73
VPS51-216ENST00000534591 CCDC183Q5T5S1 534 aa19.61■□□□□ 0.73
VPS51-216ENST00000534591 TLL2Q9Y6L7 1015 aa19.61■□□□□ 0.73
VPS51-216ENST00000534591 hCG_1984214I3L0E3 225 aa19.61■□□□□ 0.73
VPS51-216ENST00000534591 SPTLC2O15270 562 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms