RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	MBIP	Q9NS73	344 aa		6.57	□□□□□ -1.36
ECHDC1-223	ENST00000534442	RRP7BP	Q9NSQ0	103 aa		6.57	□□□□□ -1.36
ECHDC1-223	ENST00000534442	NXF1	Q9UBU9	619 aa	Known RBP	6.57	□□□□□ -1.36
ECHDC1-223	ENST00000534442	CFAP54	Q96N23	3096 aa		6.57	□□□□□ -1.36
ECHDC1-223	ENST00000534442	KIAA0100	Q14667	2235 aa	Known RBP	6.57	□□□□□ -1.36
ECHDC1-223	ENST00000534442	EPG5	Q9HCE0	2579 aa		6.57	□□□□□ -1.36
ECHDC1-223	ENST00000534442	KMT2B	Q9UMN6	2715 aa	Predicted RBP	6.56	□□□□□ -1.36
ECHDC1-223	ENST00000534442	C5	P01031	1676 aa		6.56	□□□□□ -1.36
ECHDC1-223	ENST00000534442		H3BM21	787 aa		6.56	□□□□□ -1.36
ECHDC1-223	ENST00000534442	MAP2K3	P46734	347 aa		6.56	□□□□□ -1.36
ECHDC1-223	ENST00000534442	RPS26	P62854	115 aa	Known RBP	6.56	□□□□□ -1.36
ECHDC1-223	ENST00000534442	RNFT1	Q5M7Z0	435 aa		6.56	□□□□□ -1.36
ECHDC1-223	ENST00000534442	CST9	Q5W186	159 aa		6.56	□□□□□ -1.36
ECHDC1-223	ENST00000534442	MICALL1	Q8N3F8	863 aa		6.56	□□□□□ -1.36
ECHDC1-223	ENST00000534442	GOLM1	Q8NBJ4	401 aa		6.56	□□□□□ -1.36
ECHDC1-223	ENST00000534442	TTC9	Q92623	222 aa		6.56	□□□□□ -1.36
ECHDC1-223	ENST00000534442	SEC16B	Q96JE7	1060 aa		6.56	□□□□□ -1.36
ECHDC1-223	ENST00000534442	GINM1	Q9NU53	330 aa		6.56	□□□□□ -1.36
ECHDC1-223	ENST00000534442	UBP1	Q9NZI7	540 aa		6.56	□□□□□ -1.36
ECHDC1-223	ENST00000534442	FRRS1L	Q9P0K9	344 aa		6.56	□□□□□ -1.36
ECHDC1-223	ENST00000534442	GGA1	Q9UJY5	639 aa		6.56	□□□□□ -1.36
ECHDC1-223	ENST00000534442	HDAC9	Q9UKV0	1011 aa		6.56	□□□□□ -1.36
ECHDC1-223	ENST00000534442	STARD13	Q9Y3M8	1113 aa		6.56	□□□□□ -1.36
ECHDC1-223	ENST00000534442	SUPT16H	Q9Y5B9	1047 aa	Known RBP	6.56	□□□□□ -1.36
ECHDC1-223	ENST00000534442	PCDHB5	Q9Y5E4	795 aa		6.56	□□□□□ -1.36
ECHDC1-223	ENST00000534442	SCN4A	P35499	1836 aa		6.55	□□□□□ -1.36
ECHDC1-223	ENST00000534442	ELOA3C	A0A087WX78	387 aa	Predicted RBP	6.55	□□□□□ -1.36
ECHDC1-223	ENST00000534442	ELOA3D	A6NLF2	546 aa	Predicted RBP	6.55	□□□□□ -1.36
ECHDC1-223	ENST00000534442	ESRRA	P11474	423 aa	Predicted RBP	6.55	□□□□□ -1.36
ECHDC1-223	ENST00000534442	CRK	P46108	304 aa		6.55	□□□□□ -1.36
ECHDC1-223	ENST00000534442	NASP	P49321	788 aa	Predicted RBP	6.55	□□□□□ -1.36
ECHDC1-223	ENST00000534442	NOG	Q13253	232 aa		6.55	□□□□□ -1.36
ECHDC1-223	ENST00000534442	GRIK5	Q16478	980 aa		6.55	□□□□□ -1.36
ECHDC1-223	ENST00000534442	ELOA3B	Q3SY89	546 aa		6.55	□□□□□ -1.36
ECHDC1-223	ENST00000534442	SNAP47	Q5SQN1	464 aa		6.55	□□□□□ -1.36
ECHDC1-223	ENST00000534442	PSAPL1	Q6NUJ1	521 aa		6.55	□□□□□ -1.36
ECHDC1-223	ENST00000534442	SAPCD2	Q86UD0	394 aa		6.55	□□□□□ -1.36
ECHDC1-223	ENST00000534442	ELOA3	Q8NG57	546 aa		6.55	□□□□□ -1.36
ECHDC1-223	ENST00000534442	RNF186	Q9NXI6	227 aa		6.55	□□□□□ -1.36
ECHDC1-223	ENST00000534442	EFR3B	Q9Y2G0	817 aa		6.55	□□□□□ -1.36
ECHDC1-223	ENST00000534442	ZDBF2	Q9HCK1	2354 aa		6.55	□□□□□ -1.36
ECHDC1-223	ENST00000534442	CFAP47	Q6ZTR5	3102 aa		6.55	□□□□□ -1.36
ECHDC1-223	ENST00000534442	VSIG8	P0DPA2	414 aa		6.54	□□□□□ -1.36
ECHDC1-223	ENST00000534442	EPHA1	P21709	976 aa		6.54	□□□□□ -1.36
ECHDC1-223	ENST00000534442	NME2	P22392	152 aa		6.54	□□□□□ -1.36
ECHDC1-223	ENST00000534442	CDC27	P30260	824 aa		6.54	□□□□□ -1.36
ECHDC1-223	ENST00000534442	SOX9	P48436	509 aa		6.54	□□□□□ -1.36
ECHDC1-223	ENST00000534442	PPP2R3A	Q06190	1150 aa		6.54	□□□□□ -1.36
ECHDC1-223	ENST00000534442	INTS3	Q68E01	1043 aa	Known RBP	6.54	□□□□□ -1.36
ECHDC1-223	ENST00000534442	BNC2	Q6ZN30	1099 aa	Predicted RBP	6.54	□□□□□ -1.36
ECHDC1-223	ENST00000534442	TRIM42	Q8IWZ5	723 aa		6.54	□□□□□ -1.36
ECHDC1-223	ENST00000534442	FBXO27	Q8NI29	283 aa		6.54	□□□□□ -1.36
ECHDC1-223	ENST00000534442	GRIN3A	Q8TCU5	1115 aa		6.54	□□□□□ -1.36
ECHDC1-223	ENST00000534442	SPATA32	Q96LK8	384 aa		6.54	□□□□□ -1.36
ECHDC1-223	ENST00000534442	C5orf42	Q9H799	3197 aa		6.53	□□□□□ -1.36
ECHDC1-223	ENST00000534442	MAST4	O15021	2626 aa		6.53	□□□□□ -1.36
ECHDC1-223	ENST00000534442	FAM221A	A4D161	298 aa		6.53	□□□□□ -1.36
ECHDC1-223	ENST00000534442	F13A1	P00488	732 aa		6.53	□□□□□ -1.36
ECHDC1-223	ENST00000534442	ARNT	P27540	789 aa		6.53	□□□□□ -1.36
ECHDC1-223	ENST00000534442	HGSNAT	Q68CP4	663 aa		6.53	□□□□□ -1.36
ECHDC1-223	ENST00000534442	GDF6	Q6KF10	455 aa	Predicted RBP	6.53	□□□□□ -1.36
ECHDC1-223	ENST00000534442	C20orf204	Q6ZNR8	217 aa		6.53	□□□□□ -1.36
ECHDC1-223	ENST00000534442	CCDC84	Q86UT8	332 aa	Predicted RBP	6.53	□□□□□ -1.36
ECHDC1-223	ENST00000534442	SULF2	Q8IWU5	870 aa		6.53	□□□□□ -1.36
ECHDC1-223	ENST00000534442	NPAS3	Q8IXF0	933 aa		6.53	□□□□□ -1.36
ECHDC1-223	ENST00000534442	NUDT8	Q8WV74	236 aa		6.53	□□□□□ -1.36
ECHDC1-223	ENST00000534442	SYTL4	Q96C24	671 aa	Predicted RBP	6.53	□□□□□ -1.36
ECHDC1-223	ENST00000534442	C1QTNF1	Q9BXJ1	281 aa		6.53	□□□□□ -1.36
ECHDC1-223	ENST00000534442	STK26	Q9P289	416 aa		6.53	□□□□□ -1.36
ECHDC1-223	ENST00000534442	NSFL1C	Q9UNZ2	370 aa	Known RBP	6.53	□□□□□ -1.36
ECHDC1-223	ENST00000534442	TRPM7	Q96QT4	1865 aa		6.53	□□□□□ -1.36
ECHDC1-223	ENST00000534442	TRAF5	O00463	557 aa		6.52	□□□□□ -1.37
ECHDC1-223	ENST00000534442	RGS9	O75916	674 aa	Predicted RBP	6.52	□□□□□ -1.37
ECHDC1-223	ENST00000534442	STK10	O94804	968 aa	Known RBP	6.52	□□□□□ -1.37
ECHDC1-223	ENST00000534442	CHRNA5	P30532	468 aa		6.52	□□□□□ -1.37
ECHDC1-223	ENST00000534442	KRT76	Q01546	638 aa		6.52	□□□□□ -1.37
ECHDC1-223	ENST00000534442	ZNF252P-AS1	Q0IIN9	211 aa		6.52	□□□□□ -1.37
ECHDC1-223	ENST00000534442	APOBR	Q0VD83	1088 aa		6.52	□□□□□ -1.37
ECHDC1-223	ENST00000534442	SEPT6	Q14141	434 aa		6.52	□□□□□ -1.37
ECHDC1-223	ENST00000534442	IKBKE	Q14164	716 aa		6.52	□□□□□ -1.37
ECHDC1-223	ENST00000534442	CCDC144B	Q3MJ40	725 aa		6.52	□□□□□ -1.37
ECHDC1-223	ENST00000534442	SLCO4C1	Q6ZQN7	724 aa		6.52	□□□□□ -1.37
ECHDC1-223	ENST00000534442	C1orf229	Q6ZS94	237 aa	Predicted RBP	6.52	□□□□□ -1.37
ECHDC1-223	ENST00000534442	PDZD3	Q86UT5	571 aa		6.52	□□□□□ -1.37
ECHDC1-223	ENST00000534442	SLITRK4	Q8IW52	837 aa		6.52	□□□□□ -1.37
ECHDC1-223	ENST00000534442	SYNE4	Q8N205	404 aa		6.52	□□□□□ -1.37
ECHDC1-223	ENST00000534442	GUCD1	Q96NT3	240 aa		6.52	□□□□□ -1.37
ECHDC1-223	ENST00000534442	LRRC3	Q9BY71	257 aa		6.52	□□□□□ -1.37
ECHDC1-223	ENST00000534442	CYP8B1	Q9UNU6	501 aa		6.52	□□□□□ -1.37
ECHDC1-223	ENST00000534442	CHD6	Q8TD26	2715 aa		6.52	□□□□□ -1.37
ECHDC1-223	ENST00000534442	WDR17	Q8IZU2	1322 aa		6.51	□□□□□ -1.37
ECHDC1-223	ENST00000534442	TLR3	O15455	904 aa	Known RBP	6.51	□□□□□ -1.37
ECHDC1-223	ENST00000534442	EPX	P11678	715 aa		6.51	□□□□□ -1.37
ECHDC1-223	ENST00000534442	EPHX2	P34913	555 aa		6.51	□□□□□ -1.37
ECHDC1-223	ENST00000534442	PTPN11	Q06124	597 aa	Predicted RBP	6.51	□□□□□ -1.37
ECHDC1-223	ENST00000534442	GIMAP6	Q6P9H5	292 aa		6.51	□□□□□ -1.37
ECHDC1-223	ENST00000534442	MPRIP	Q6WCQ1	1025 aa		6.51	□□□□□ -1.37
ECHDC1-223	ENST00000534442	FAM177A1	Q8N128	213 aa	Predicted RBP	6.51	□□□□□ -1.37
ECHDC1-223	ENST00000534442	GOLGA6L1	Q8N7Z2	621 aa		6.51	□□□□□ -1.37
ECHDC1-223	ENST00000534442	GATAD2B	Q8WXI9	593 aa		6.51	□□□□□ -1.37

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