RNA–Protein interactions for RNA: ENST00000534283.1

RELA-223, Transcript of RELA proto-oncogene, NF-kB subunit, human

TSL 5

Gene RELA, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RELA-223	ENST00000534283	PPP1R9A	Q9ULJ8	1098 aa		29.04	■■■□□ 2.24
RELA-223	ENST00000534283		A0A0G2JMZ2	1700 aa		29.03	■■■□□ 2.24
RELA-223	ENST00000534283	IGKV6D-41	A0A0C4DH26	115 aa		29.03	■■■□□ 2.24
RELA-223	ENST00000534283	VWA5A	O00534	786 aa		29.03	■■■□□ 2.24
RELA-223	ENST00000534283	SLC25A27	O95847	323 aa		29.03	■■■□□ 2.24
RELA-223	ENST00000534283	GNAT2	P19087	354 aa		29.03	■■■□□ 2.24
RELA-223	ENST00000534283	CNGA1	P29973	690 aa		29.03	■■■□□ 2.24
RELA-223	ENST00000534283	FAM83B	Q5T0W9	1011 aa		29.03	■■■□□ 2.24
RELA-223	ENST00000534283	STK11IP	Q8N1F8	1099 aa		29.03	■■■□□ 2.24
RELA-223	ENST00000534283	MKNK2	Q9HBH9	465 aa		29.03	■■■□□ 2.24
RELA-223	ENST00000534283	PATL2	C9JE40	543 aa	Known RBP	29.02	■■■□□ 2.24
RELA-223	ENST00000534283	SOX1	O00570	391 aa	Predicted RBP	29.02	■■■□□ 2.24
RELA-223	ENST00000534283	RIOX2	Q8IUF8	465 aa		29.02	■■■□□ 2.24
RELA-223	ENST00000534283	ZNF214	Q9UL59	606 aa	Predicted RBP	29.02	■■■□□ 2.24
RELA-223	ENST00000534283	ALPK3	Q96L96	1907 aa		29.02	■■■□□ 2.24
RELA-223	ENST00000534283	BAZ2A	Q9UIF9	1905 aa	Known RBP	29.02	■■■□□ 2.24
RELA-223	ENST00000534283	FCER1A	P12319	257 aa		29.01	■■■□□ 2.23
RELA-223	ENST00000534283	MAGEA10	P43363	369 aa	Predicted RBP	29.01	■■■□□ 2.23
RELA-223	ENST00000534283	SAMD1	Q6SPF0	538 aa	Predicted RBP	29.01	■■■□□ 2.23
RELA-223	ENST00000534283	MAML3	Q96JK9	1138 aa		29.01	■■■□□ 2.23
RELA-223	ENST00000534283	SEC62	Q99442	399 aa	Known RBP	29.01	■■■□□ 2.23
RELA-223	ENST00000534283	STAT3	P40763	770 aa		29	■■■□□ 2.23
RELA-223	ENST00000534283	RRP1	P56182	461 aa	Known RBP	29	■■■□□ 2.23
RELA-223	ENST00000534283	IFNL3	Q8IZI9	196 aa		29	■■■□□ 2.23
RELA-223	ENST00000534283	NUP88	Q99567	741 aa	Predicted RBP	29	■■■□□ 2.23
RELA-223	ENST00000534283	SLC5A4	Q9NY91	659 aa		29	■■■□□ 2.23
RELA-223	ENST00000534283	SALL3	Q9BXA9	1300 aa		28.99	■■■□□ 2.23
RELA-223	ENST00000534283		F5H6K3	240 aa		28.99	■■■□□ 2.23
RELA-223	ENST00000534283	DNM1L	O00429	736 aa		28.99	■■■□□ 2.23
RELA-223	ENST00000534283	ERC2	O15083	957 aa		28.99	■■■□□ 2.23
RELA-223	ENST00000534283	NDUFB10	O96000	172 aa		28.99	■■■□□ 2.23
RELA-223	ENST00000534283	KLRC3	Q07444	240 aa		28.99	■■■□□ 2.23
RELA-223	ENST00000534283	PRAMEF19	Q5SWL8	479 aa		28.99	■■■□□ 2.23
RELA-223	ENST00000534283	MKL1	Q969V6	931 aa		28.99	■■■□□ 2.23
RELA-223	ENST00000534283	SENP6	Q9GZR1	1112 aa	Predicted RBP	28.99	■■■□□ 2.23
RELA-223	ENST00000534283	LAMA3	Q16787	3333 aa		28.99	■■■□□ 2.23
RELA-223	ENST00000534283	ZNF236	Q9UL36	1845 aa		28.99	■■■□□ 2.23
RELA-223	ENST00000534283	SEPT4	O43236	478 aa		28.98	■■■□□ 2.23
RELA-223	ENST00000534283	TDO2	P48775	406 aa		28.98	■■■□□ 2.23
RELA-223	ENST00000534283	LRRFIP1	Q32MZ4	808 aa	Known RBP	28.98	■■■□□ 2.23
RELA-223	ENST00000534283	ZMYM1	Q5SVZ6	1142 aa		28.98	■■■□□ 2.23
RELA-223	ENST00000534283	PRDM1	O75626	825 aa		28.97	■■■□□ 2.23
RELA-223	ENST00000534283	APP	P05067	770 aa		28.97	■■■□□ 2.23
RELA-223	ENST00000534283	MMP19	Q99542	508 aa		28.97	■■■□□ 2.23
RELA-223	ENST00000534283	CLIP2	Q9UDT6	1046 aa		28.97	■■■□□ 2.23
RELA-223	ENST00000534283	RAD21	O60216	631 aa		28.96	■■■□□ 2.23
RELA-223	ENST00000534283	MX1	P20591	662 aa		28.96	■■■□□ 2.23
RELA-223	ENST00000534283	ZNF792	Q3KQV3	632 aa		28.96	■■■□□ 2.23
RELA-223	ENST00000534283	LRCH3	Q96II8	777 aa		28.96	■■■□□ 2.23
RELA-223	ENST00000534283	SLF1	Q9BQI6	1058 aa		28.96	■■■□□ 2.23
RELA-223	ENST00000534283	MTMR4	Q9NYA4	1195 aa		28.96	■■■□□ 2.23
RELA-223	ENST00000534283	DIS3	Q9Y2L1	958 aa	Known RBP	28.96	■■■□□ 2.23
RELA-223	ENST00000534283	PGK2	P07205	417 aa		28.95	■■■□□ 2.22
RELA-223	ENST00000534283	GJC2	Q5T442	439 aa	Predicted RBP	28.95	■■■□□ 2.22
RELA-223	ENST00000534283	ZNF444	Q8N0Y2	327 aa	Predicted RBP	28.95	■■■□□ 2.22
RELA-223	ENST00000534283	ARRDC4	Q8NCT1	418 aa		28.95	■■■□□ 2.22
RELA-223	ENST00000534283	CEP95	Q96GE4	821 aa		28.95	■■■□□ 2.22
RELA-223	ENST00000534283	FOXP2	O15409	715 aa		28.94	■■■□□ 2.22
RELA-223	ENST00000534283	COPB2	P35606	906 aa		28.94	■■■□□ 2.22
RELA-223	ENST00000534283	ANO1	Q5XXA6	986 aa		28.94	■■■□□ 2.22
RELA-223	ENST00000534283	FSD1	Q9BTV5	496 aa		28.94	■■■□□ 2.22
RELA-223	ENST00000534283	ZNF287	Q9HBT7	754 aa		28.94	■■■□□ 2.22
RELA-223	ENST00000534283	NRBP1	Q9UHY1	535 aa		28.94	■■■□□ 2.22
RELA-223	ENST00000534283	SYNPO2	Q9UMS6	1093 aa		28.94	■■■□□ 2.22
RELA-223	ENST00000534283	MYH7	P12883	1935 aa		28.94	■■■□□ 2.22
RELA-223	ENST00000534283	GREB1L	Q9C091	1923 aa	Predicted RBP	28.93	■■■□□ 2.22
RELA-223	ENST00000534283	PRPF38A	Q8NAV1	312 aa	Known RBP	28.93	■■■□□ 2.22
RELA-223	ENST00000534283	NEDD1	Q8NHV4	660 aa		28.93	■■■□□ 2.22
RELA-223	ENST00000534283	CRBN	Q96SW2	442 aa		28.93	■■■□□ 2.22
RELA-223	ENST00000534283	NACAP1	Q9BZK3	213 aa		28.93	■■■□□ 2.22
RELA-223	ENST00000534283	ATP2A1	O14983	1001 aa		28.92	■■■□□ 2.22
RELA-223	ENST00000534283	ATN1	P54259	1190 aa	Predicted RBP	28.92	■■■□□ 2.22
RELA-223	ENST00000534283	KCTD2	Q14681	263 aa		28.92	■■■□□ 2.22
RELA-223	ENST00000534283	TEX13B	Q9BXU2	312 aa		28.92	■■■□□ 2.22
RELA-223	ENST00000534283	RIPK3	Q9Y572	518 aa		28.92	■■■□□ 2.22
RELA-223	ENST00000534283	PLIN4	Q96Q06	1357 aa		28.91	■■■□□ 2.22
RELA-223	ENST00000534283	LRIT3	Q3SXY7	679 aa		28.91	■■■□□ 2.22
RELA-223	ENST00000534283	GMCL1P1	Q8NEA9	526 aa		28.91	■■■□□ 2.22
RELA-223	ENST00000534283	TINF2	Q9BSI4	451 aa		28.91	■■■□□ 2.22
RELA-223	ENST00000534283	TTLL1	O95922	423 aa		28.9	■■■□□ 2.22
RELA-223	ENST00000534283	HDAC1	Q13547	482 aa	Predicted RBP	28.9	■■■□□ 2.22
RELA-223	ENST00000534283	ANKRD45	Q5TZF3	282 aa		28.9	■■■□□ 2.22
RELA-223	ENST00000534283	TDH	Q8IZJ6	230 aa		28.9	■■■□□ 2.22
RELA-223	ENST00000534283	UBE2O	Q9C0C9	1292 aa	Known RBP	28.9	■■■□□ 2.22
RELA-223	ENST00000534283	TAL1	P17542	331 aa	Predicted RBP	28.89	■■■□□ 2.22
RELA-223	ENST00000534283	PPARA	Q07869	468 aa		28.89	■■■□□ 2.22
RELA-223	ENST00000534283	LRRC41	Q15345	812 aa		28.89	■■■□□ 2.22
RELA-223	ENST00000534283	FAM47A	Q5JRC9	791 aa		28.89	■■■□□ 2.22
RELA-223	ENST00000534283	SLC39A5	Q6ZMH5	540 aa		28.89	■■■□□ 2.22
RELA-223	ENST00000534283	NAPB	Q9H115	298 aa		28.89	■■■□□ 2.22
RELA-223	ENST00000534283	SLC38A10	Q9HBR0	1119 aa		28.89	■■■□□ 2.22
RELA-223	ENST00000534283	DNAJC25-GNG10	A0A024R161	153 aa		28.88	■■■□□ 2.21
RELA-223	ENST00000534283	ZNF865	P0CJ78	1059 aa	Predicted RBP	28.88	■■■□□ 2.21
RELA-223	ENST00000534283	RTP1	P59025	263 aa		28.88	■■■□□ 2.21
RELA-223	ENST00000534283	TFAP4	Q01664	338 aa		28.88	■■■□□ 2.21
RELA-223	ENST00000534283	PDE4B	Q07343	736 aa		28.88	■■■□□ 2.21
RELA-223	ENST00000534283	SNX17	Q15036	470 aa		28.88	■■■□□ 2.21
RELA-223	ENST00000534283	SNRNP48	Q6IEG0	339 aa	Known RBP	28.88	■■■□□ 2.21
RELA-223	ENST00000534283	CCDC129	Q6ZRS4	1044 aa		28.88	■■■□□ 2.21
RELA-223	ENST00000534283	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	28.88	■■■□□ 2.21

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