RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 SEPT4O43236 478 aa21.72■■□□□ 1.07
UBXN1-216ENST00000533908 ZNFX1Q9P2E3 1918 aaKnown RBP21.71■■□□□ 1.07
UBXN1-216ENST00000533908 LBHD1Q9BQE6 289 aaPredicted RBP21.71■■□□□ 1.07
UBXN1-216ENST00000533908 SH2D4AQ9H788 454 aa21.71■■□□□ 1.07
UBXN1-216ENST00000533908 KANSL2Q9H9L4 492 aa21.71■■□□□ 1.07
UBXN1-216ENST00000533908 ATP11BQ9Y2G3 1177 aa21.71■■□□□ 1.07
UBXN1-216ENST00000533908 STXBP5LQ9Y2K9 1186 aa21.71■■□□□ 1.07
UBXN1-216ENST00000533908 POTEB2H3BUK9 544 aa21.7■■□□□ 1.06
UBXN1-216ENST00000533908 PGK2P07205 417 aa21.7■■□□□ 1.06
UBXN1-216ENST00000533908 FCER1AP12319 257 aa21.7■■□□□ 1.06
UBXN1-216ENST00000533908 ADCYAP1R1P41586 468 aa21.7■■□□□ 1.06
UBXN1-216ENST00000533908 STRBPQ96SI9 672 aaKnown RBP21.7■■□□□ 1.06
UBXN1-216ENST00000533908 COL11A1P12107 1806 aaPredicted RBP21.7■■□□□ 1.06
UBXN1-216ENST00000533908 SMCHD1A6NHR9 2005 aa21.69■■□□□ 1.06
UBXN1-216ENST00000533908 VWA5AO00534 786 aa21.69■■□□□ 1.06
UBXN1-216ENST00000533908 MYCNP04198 464 aaPredicted RBP21.69■■□□□ 1.06
UBXN1-216ENST00000533908 LRRC41Q15345 812 aa21.69■■□□□ 1.06
UBXN1-216ENST00000533908 FAM47AQ5JRC9 791 aa21.69■■□□□ 1.06
UBXN1-216ENST00000533908 RIOX2Q8IUF8 465 aa21.69■■□□□ 1.06
UBXN1-216ENST00000533908 REPS2Q8NFH8 660 aa21.69■■□□□ 1.06
UBXN1-216ENST00000533908 FERMT2Q96AC1 680 aa21.69■■□□□ 1.06
UBXN1-216ENST00000533908 LRRCC1Q9C099 1032 aa21.69■■□□□ 1.06
UBXN1-216ENST00000533908 SLC5A4Q9NY91 659 aa21.69■■□□□ 1.06
UBXN1-216ENST00000533908 RCAN3Q9UKA8 241 aa21.69■■□□□ 1.06
UBXN1-216ENST00000533908 SLC25A27O95847 323 aa21.68■■□□□ 1.06
UBXN1-216ENST00000533908 TAL1P17542 331 aaPredicted RBP21.68■■□□□ 1.06
UBXN1-216ENST00000533908 SNX17Q15036 470 aa21.68■■□□□ 1.06
UBXN1-216ENST00000533908 TRIM60Q495X7 471 aa21.68■■□□□ 1.06
UBXN1-216ENST00000533908 FAM83BQ5T0W9 1011 aa21.68■■□□□ 1.06
UBXN1-216ENST00000533908 SH3RF1Q7Z6J0 888 aa21.68■■□□□ 1.06
UBXN1-216ENST00000533908 NUP88Q99567 741 aaPredicted RBP21.68■■□□□ 1.06
UBXN1-216ENST00000533908 ZNF214Q9UL59 606 aaPredicted RBP21.68■■□□□ 1.06
UBXN1-216ENST00000533908 MYH7P12883 1935 aa21.68■■□□□ 1.06
UBXN1-216ENST00000533908 A0A0C4DFX4 3053 aa21.67■■□□□ 1.06
UBXN1-216ENST00000533908 GSG1L2A8MUP6 293 aa21.67■■□□□ 1.06
UBXN1-216ENST00000533908 KBTBD13C9JR72 458 aa21.67■■□□□ 1.06
UBXN1-216ENST00000533908 RASA1P20936 1047 aa21.67■■□□□ 1.06
UBXN1-216ENST00000533908 STAT3P40763 770 aa21.67■■□□□ 1.06
UBXN1-216ENST00000533908 ZNF792Q3KQV3 632 aa21.67■■□□□ 1.06
UBXN1-216ENST00000533908 AMOTL1Q8IY63 956 aa21.67■■□□□ 1.06
UBXN1-216ENST00000533908 STK11IPQ8N1F8 1099 aa21.67■■□□□ 1.06
UBXN1-216ENST00000533908 MMP19Q99542 508 aa21.67■■□□□ 1.06
UBXN1-216ENST00000533908 PPP1R9AQ9ULJ8 1098 aa21.67■■□□□ 1.06
UBXN1-216ENST00000533908 LTBP2Q14767 1821 aa21.66■■□□□ 1.06
UBXN1-216ENST00000533908 SHHQ15465 462 aa21.66■■□□□ 1.06
UBXN1-216ENST00000533908 SBK1Q52WX2 424 aa21.66■■□□□ 1.06
UBXN1-216ENST00000533908 OSBP2Q969R2 916 aa21.66■■□□□ 1.06
UBXN1-216ENST00000533908 DDRGK1Q96HY6 314 aa21.66■■□□□ 1.06
UBXN1-216ENST00000533908 TINF2Q9BSI4 451 aa21.66■■□□□ 1.06
UBXN1-216ENST00000533908 ECHDC1Q9NTX5 307 aa21.66■■□□□ 1.06
UBXN1-216ENST00000533908 TRIM43BA6NCK2 446 aa21.65■■□□□ 1.06
UBXN1-216ENST00000533908 RAD21O60216 631 aa21.65■■□□□ 1.06
UBXN1-216ENST00000533908 C9orf50Q5SZB4 431 aa21.65■■□□□ 1.06
UBXN1-216ENST00000533908 FAM109BQ6ICB4 259 aaPredicted RBP21.65■■□□□ 1.06
UBXN1-216ENST00000533908 ZSCAN25Q6NSZ9 544 aa21.65■■□□□ 1.06
UBXN1-216ENST00000533908 BADQ92934 168 aa21.65■■□□□ 1.06
UBXN1-216ENST00000533908 TRIM43Q96BQ3 446 aaPredicted RBP21.65■■□□□ 1.06
UBXN1-216ENST00000533908 GUCD1Q96NT3 240 aa21.65■■□□□ 1.06
UBXN1-216ENST00000533908 CHMP4BQ9H444 224 aaKnown RBP21.65■■□□□ 1.06
UBXN1-216ENST00000533908 GOPCQ9HD26 462 aa21.65■■□□□ 1.06
UBXN1-216ENST00000533908 PRKAG2Q9UGJ0 569 aa21.65■■□□□ 1.06
UBXN1-216ENST00000533908 RIPK3Q9Y572 518 aa21.65■■□□□ 1.06
UBXN1-216ENST00000533908 GREB1LQ9C091 1923 aaPredicted RBP21.65■■□□□ 1.06
UBXN1-216ENST00000533908 PGK1P00558 417 aa21.64■■□□□ 1.05
UBXN1-216ENST00000533908 ZNF865P0CJ78 1059 aaPredicted RBP21.64■■□□□ 1.05
UBXN1-216ENST00000533908 TSHZ3Q63HK5 1081 aa21.64■■□□□ 1.05
UBXN1-216ENST00000533908 PRDM5Q9NQX1 630 aaPredicted RBP21.64■■□□□ 1.05
UBXN1-216ENST00000533908 PDLIM7Q9NR12 457 aa21.64■■□□□ 1.05
UBXN1-216ENST00000533908 ARPP21Q9UBL0 812 aaPredicted RBP21.64■■□□□ 1.05
UBXN1-216ENST00000533908 PHF24Q9UPV7 400 aa21.64■■□□□ 1.05
UBXN1-216ENST00000533908 DIS3Q9Y2L1 958 aaKnown RBP21.64■■□□□ 1.05
UBXN1-216ENST00000533908 LAMA2P24043 3122 aaKnown RBP21.63■■□□□ 1.05
UBXN1-216ENST00000533908 F5H6K3 240 aa21.63■■□□□ 1.05
UBXN1-216ENST00000533908 ITGB8P26012 769 aa21.63■■□□□ 1.05
UBXN1-216ENST00000533908 TLE2Q04725 743 aa21.63■■□□□ 1.05
UBXN1-216ENST00000533908 KLRC3Q07444 240 aa21.63■■□□□ 1.05
UBXN1-216ENST00000533908 KCTD2Q14681 263 aa21.63■■□□□ 1.05
UBXN1-216ENST00000533908 C1orf53Q5VUE5 145 aa21.63■■□□□ 1.05
UBXN1-216ENST00000533908 KBTBD3Q8NAB2 608 aa21.63■■□□□ 1.05
UBXN1-216ENST00000533908 LENG1Q96BZ8 264 aaPredicted RBP21.63■■□□□ 1.05
UBXN1-216ENST00000533908 FAM161BQ96MY7 647 aa21.63■■□□□ 1.05
UBXN1-216ENST00000533908 EPB41L4AQ9HCS5 686 aaPredicted RBP21.63■■□□□ 1.05
UBXN1-216ENST00000533908 XPNPEP3Q9NQH7 507 aa21.63■■□□□ 1.05
UBXN1-216ENST00000533908 NYAP2Q9P242 653 aa21.63■■□□□ 1.05
UBXN1-216ENST00000533908 NRBP1Q9UHY1 535 aa21.63■■□□□ 1.05
UBXN1-216ENST00000533908 MINDY4BA8MYZ0 360 aa21.62■■□□□ 1.05
UBXN1-216ENST00000533908 NDUFB10O96000 172 aa21.62■■□□□ 1.05
UBXN1-216ENST00000533908 PLXNA1Q9UIW2 1896 aa21.61■■□□□ 1.05
UBXN1-216ENST00000533908 IGKV6D-41A0A0C4DH26 115 aa21.61■■□□□ 1.05
UBXN1-216ENST00000533908 RARBP10826 455 aa21.61■■□□□ 1.05
UBXN1-216ENST00000533908 GIMAP6Q6P9H5 292 aa21.61■■□□□ 1.05
UBXN1-216ENST00000533908 SLF1Q9BQI6 1058 aa21.61■■□□□ 1.05
UBXN1-216ENST00000533908 DCTPP1Q9H773 170 aa21.61■■□□□ 1.05
UBXN1-216ENST00000533908 RNF113AO15541 343 aaKnown RBP21.6■■□□□ 1.05
UBXN1-216ENST00000533908 SNAI1O95863 264 aaPredicted RBP21.6■■□□□ 1.05
UBXN1-216ENST00000533908 APPBP2Q92624 585 aa21.6■■□□□ 1.05
UBXN1-216ENST00000533908 MKNK2Q9HBH9 465 aa21.6■■□□□ 1.05
UBXN1-216ENST00000533908 CLIP2Q9UDT6 1046 aa21.6■■□□□ 1.05
UBXN1-216ENST00000533908 DNAJC25-GNG10A0A024R161 153 aa21.59■■□□□ 1.05
UBXN1-216ENST00000533908 M0R2C6 588 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms