RNA–Protein interactions for RNA: ENST00000533905.1

CLP1-206, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-206ENST00000533905 GTF3C2Q8WUA4 911 aaPredicted RBP12.37□□□□□ -0.43
CLP1-206ENST00000533905 FERMT2Q96AC1 680 aa12.37□□□□□ -0.43
CLP1-206ENST00000533905 CHMP4CQ96CF2 233 aa12.37□□□□□ -0.43
CLP1-206ENST00000533905 MAML3Q96JK9 1138 aa12.37□□□□□ -0.43
CLP1-206ENST00000533905 UBE2OQ9C0C9 1292 aaKnown RBP12.37□□□□□ -0.43
CLP1-206ENST00000533905 CWC22Q9HCG8 908 aaKnown RBP12.37□□□□□ -0.43
CLP1-206ENST00000533905 RCAN3Q9UKA8 241 aa12.37□□□□□ -0.43
CLP1-206ENST00000533905 DDX19BQ9UMR2 479 aa12.37□□□□□ -0.43
CLP1-206ENST00000533905 RIPK3Q9Y572 518 aa12.37□□□□□ -0.43
CLP1-206ENST00000533905 SLC4A4Q9Y6R1 1079 aa12.37□□□□□ -0.43
CLP1-206ENST00000533905 MYH7P12883 1935 aa12.37□□□□□ -0.43
CLP1-206ENST00000533905 TRIM43BA6NCK2 446 aa12.36□□□□□ -0.43
CLP1-206ENST00000533905 MYADML2A6NDP7 307 aa12.36□□□□□ -0.43
CLP1-206ENST00000533905 GSG1L2A8MUP6 293 aa12.36□□□□□ -0.43
CLP1-206ENST00000533905 PRDM1O75626 825 aa12.36□□□□□ -0.43
CLP1-206ENST00000533905 EPHB4P54760 987 aa12.36□□□□□ -0.43
CLP1-206ENST00000533905 LRIT3Q3SXY7 679 aa12.36□□□□□ -0.43
CLP1-206ENST00000533905 TRIM60Q495X7 471 aa12.36□□□□□ -0.43
CLP1-206ENST00000533905 MFSD14CQ5VZR4 134 aa12.36□□□□□ -0.43
CLP1-206ENST00000533905 NCAPG2Q86XI2 1143 aa12.36□□□□□ -0.43
CLP1-206ENST00000533905 LPAR1Q92633 364 aa12.36□□□□□ -0.43
CLP1-206ENST00000533905 TRIM43Q96BQ3 446 aaPredicted RBP12.36□□□□□ -0.43
CLP1-206ENST00000533905 FGD4Q96M96 766 aa12.36□□□□□ -0.43
CLP1-206ENST00000533905 FAM161BQ96MY7 647 aa12.36□□□□□ -0.43
CLP1-206ENST00000533905 GUCD1Q96NT3 240 aa12.36□□□□□ -0.43
CLP1-206ENST00000533905 STRBPQ96SI9 672 aaKnown RBP12.36□□□□□ -0.43
CLP1-206ENST00000533905 MTMR10Q9NXD2 777 aa12.36□□□□□ -0.43
CLP1-206ENST00000533905 ZNF214Q9UL59 606 aaPredicted RBP12.36□□□□□ -0.43
CLP1-206ENST00000533905 MYH8P13535 1937 aa12.36□□□□□ -0.43
CLP1-206ENST00000533905 RAB11FIP3O75154 756 aa12.35□□□□□ -0.43
CLP1-206ENST00000533905 MYCNP04198 464 aaPredicted RBP12.35□□□□□ -0.43
CLP1-206ENST00000533905 CCNA1P78396 465 aa12.35□□□□□ -0.43
CLP1-206ENST00000533905 HSP90AB4PQ58FF6 505 aa12.35□□□□□ -0.43
CLP1-206ENST00000533905 CERS3Q8IU89 383 aa12.35□□□□□ -0.43
CLP1-206ENST00000533905 TRMT44Q8IYL2 757 aaKnown RBP12.35□□□□□ -0.43
CLP1-206ENST00000533905 INCENPQ9NQS7 918 aa12.35□□□□□ -0.43
CLP1-206ENST00000533905 ADAMTS5Q9UNA0 930 aa12.35□□□□□ -0.43
CLP1-206ENST00000533905 ATP11BQ9Y2G3 1177 aa12.35□□□□□ -0.43
CLP1-206ENST00000533905 SUPT16HQ9Y5B9 1047 aaKnown RBP12.35□□□□□ -0.43
CLP1-206ENST00000533905 PCDHB15Q9Y5E8 787 aa12.35□□□□□ -0.43
CLP1-206ENST00000533905 ROBO3Q96MS0 1386 aa12.34□□□□□ -0.43
CLP1-206ENST00000533905 CUL9Q8IWT3 2517 aa12.34□□□□□ -0.43
CLP1-206ENST00000533905 IGKV6D-41A0A0C4DH26 115 aa12.34□□□□□ -0.43
CLP1-206ENST00000533905 DNM1LO00429 736 aa12.34□□□□□ -0.43
CLP1-206ENST00000533905 VWA5AO00534 786 aa12.34□□□□□ -0.43
CLP1-206ENST00000533905 PGK1P00558 417 aa12.34□□□□□ -0.43
CLP1-206ENST00000533905 ADCYAP1R1P41586 468 aa12.34□□□□□ -0.43
CLP1-206ENST00000533905 LRRC41Q15345 812 aa12.34□□□□□ -0.43
CLP1-206ENST00000533905 UBE3CQ15386 1083 aa12.34□□□□□ -0.43
CLP1-206ENST00000533905 ZNF792Q3KQV3 632 aa12.34□□□□□ -0.43
CLP1-206ENST00000533905 OLFML2BQ68BL8 750 aa12.34□□□□□ -0.43
CLP1-206ENST00000533905 DPP9Q86TI2 863 aa12.34□□□□□ -0.43
CLP1-206ENST00000533905 PDLIM7Q9NR12 457 aa12.34□□□□□ -0.43
CLP1-206ENST00000533905 ATP8A2Q9NTI2 1148 aa12.34□□□□□ -0.43
CLP1-206ENST00000533905 SWAP70Q9UH65 585 aa12.34□□□□□ -0.43
CLP1-206ENST00000533905 PPP1R9AQ9ULJ8 1098 aa12.34□□□□□ -0.43
CLP1-206ENST00000533905 IVNS1ABPQ9Y6Y0 642 aa12.34□□□□□ -0.43
CLP1-206ENST00000533905 WDR46O15213 610 aaKnown RBP12.33□□□□□ -0.44
CLP1-206ENST00000533905 RAD21O60216 631 aa12.33□□□□□ -0.44
CLP1-206ENST00000533905 NDUFB10O96000 172 aa12.33□□□□□ -0.44
CLP1-206ENST00000533905 ZNF865P0CJ78 1059 aaPredicted RBP12.33□□□□□ -0.44
CLP1-206ENST00000533905 SHHQ15465 462 aa12.33□□□□□ -0.44
CLP1-206ENST00000533905 SLC39A5Q6ZMH5 540 aa12.33□□□□□ -0.44
CLP1-206ENST00000533905 CCDC129Q6ZRS4 1044 aa12.33□□□□□ -0.44
CLP1-206ENST00000533905 LRRC47Q8N1G4 583 aaKnown RBP12.33□□□□□ -0.44
CLP1-206ENST00000533905 SHCBP1Q8NEM2 672 aa12.33□□□□□ -0.44
CLP1-206ENST00000533905 PI4K2BQ8TCG2 481 aa12.33□□□□□ -0.44
CLP1-206ENST00000533905 LRRCC1Q9C099 1032 aa12.33□□□□□ -0.44
CLP1-206ENST00000533905 SEPT4O43236 478 aa12.32□□□□□ -0.44
CLP1-206ENST00000533905 HMMRO75330 724 aa12.32□□□□□ -0.44
CLP1-206ENST00000533905 SNAP25P60880 206 aa12.32□□□□□ -0.44
CLP1-206ENST00000533905 SNX17Q15036 470 aa12.32□□□□□ -0.44
CLP1-206ENST00000533905 TMEM63BQ5T3F8 832 aa12.32□□□□□ -0.44
CLP1-206ENST00000533905 SLC17A8Q8NDX2 589 aa12.32□□□□□ -0.44
CLP1-206ENST00000533905 BADQ92934 168 aa12.32□□□□□ -0.44
CLP1-206ENST00000533905 ARHGEF10LQ9HCE6 1279 aa12.32□□□□□ -0.44
CLP1-206ENST00000533905 PRDM5Q9NQX1 630 aaPredicted RBP12.32□□□□□ -0.44
CLP1-206ENST00000533905 HOXC10Q9NYD6 342 aa12.32□□□□□ -0.44
CLP1-206ENST00000533905 ASTN1O14525 1302 aa12.32□□□□□ -0.44
CLP1-206ENST00000533905 MINDY4BA8MYZ0 360 aa12.31□□□□□ -0.44
CLP1-206ENST00000533905 POTEB2H3BUK9 544 aa12.31□□□□□ -0.44
CLP1-206ENST00000533905 GPAA1O43292 621 aa12.31□□□□□ -0.44
CLP1-206ENST00000533905 ADAMTS4O75173 837 aa12.31□□□□□ -0.44
CLP1-206ENST00000533905 GLRX3O76003 335 aaKnown RBP12.31□□□□□ -0.44
CLP1-206ENST00000533905 SNAI1O95863 264 aaPredicted RBP12.31□□□□□ -0.44
CLP1-206ENST00000533905 TMED8Q6PL24 325 aaPredicted RBP12.31□□□□□ -0.44
CLP1-206ENST00000533905 RIOX2Q8IUF8 465 aa12.31□□□□□ -0.44
CLP1-206ENST00000533905 KBTBD3Q8NAB2 608 aa12.31□□□□□ -0.44
CLP1-206ENST00000533905 MMP19Q99542 508 aa12.31□□□□□ -0.44
CLP1-206ENST00000533905 TTYH1Q9H313 450 aaPredicted RBP12.31□□□□□ -0.44
CLP1-206ENST00000533905 ECHDC1Q9NTX5 307 aa12.31□□□□□ -0.44
CLP1-206ENST00000533905 PLXNA1Q9UIW2 1896 aa12.31□□□□□ -0.44
CLP1-206ENST00000533905 SALL3Q9BXA9 1300 aa12.31□□□□□ -0.44
CLP1-206ENST00000533905 F5H6K3 240 aa12.3□□□□□ -0.44
CLP1-206ENST00000533905 NMT2O60551 498 aa12.3□□□□□ -0.44
CLP1-206ENST00000533905 CAPN2P17655 700 aa12.3□□□□□ -0.44
CLP1-206ENST00000533905 KLRC3Q07444 240 aa12.3□□□□□ -0.44
CLP1-206ENST00000533905 FAM109BQ6ICB4 259 aaPredicted RBP12.3□□□□□ -0.44
CLP1-206ENST00000533905 CEP95Q96GE4 821 aa12.3□□□□□ -0.44
CLP1-206ENST00000533905 MROH8Q9H579 483 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms