RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 IFNL3Q8IZI9 196 aa20.83■□□□□ 0.93
VPS51-213ENST00000533827 FBXO28Q9NVF7 368 aa20.83■□□□□ 0.93
VPS51-213ENST00000533827 NYAP2Q9P242 653 aa20.83■□□□□ 0.93
VPS51-213ENST00000533827 COL11A1P12107 1806 aaPredicted RBP20.83■□□□□ 0.92
VPS51-213ENST00000533827 IGKV6D-41A0A0C4DH26 115 aa20.82■□□□□ 0.92
VPS51-213ENST00000533827 COBLO75128 1261 aa20.82■□□□□ 0.92
VPS51-213ENST00000533827 APPP05067 770 aa20.82■□□□□ 0.92
VPS51-213ENST00000533827 ZMYM1Q5SVZ6 1142 aa20.82■□□□□ 0.92
VPS51-213ENST00000533827 OLFML2BQ68BL8 750 aa20.82■□□□□ 0.92
VPS51-213ENST00000533827 SAMD1Q6SPF0 538 aaPredicted RBP20.82■□□□□ 0.92
VPS51-213ENST00000533827 NCAPG2Q86XI2 1143 aa20.82■□□□□ 0.92
VPS51-213ENST00000533827 ABRAQ8N0Z2 381 aa20.82■□□□□ 0.92
VPS51-213ENST00000533827 FSD1Q9BTV5 496 aa20.82■□□□□ 0.92
VPS51-213ENST00000533827 SLC25A27O95847 323 aa20.81■□□□□ 0.92
VPS51-213ENST00000533827 FAM83BQ5T0W9 1011 aa20.81■□□□□ 0.92
VPS51-213ENST00000533827 C7orf61Q8IZ16 206 aa20.81■□□□□ 0.92
VPS51-213ENST00000533827 TRPV1Q8NER1 839 aa20.81■□□□□ 0.92
VPS51-213ENST00000533827 DDX20Q9UHI6 824 aaKnown RBP20.81■□□□□ 0.92
VPS51-213ENST00000533827 PPP1R9AQ9ULJ8 1098 aa20.81■□□□□ 0.92
VPS51-213ENST00000533827 VWA5AO00534 786 aa20.8■□□□□ 0.92
VPS51-213ENST00000533827 RAD21O60216 631 aa20.8■□□□□ 0.92
VPS51-213ENST00000533827 MSCO60682 206 aa20.8■□□□□ 0.92
VPS51-213ENST00000533827 CYBAP13498 195 aa20.8■□□□□ 0.92
VPS51-213ENST00000533827 HDAC1Q13547 482 aaPredicted RBP20.8■□□□□ 0.92
VPS51-213ENST00000533827 ANKRD45Q5TZF3 282 aa20.8■□□□□ 0.92
VPS51-213ENST00000533827 RIOX2Q8IUF8 465 aa20.8■□□□□ 0.92
VPS51-213ENST00000533827 ZNF444Q8N0Y2 327 aaPredicted RBP20.8■□□□□ 0.92
VPS51-213ENST00000533827 ZNF287Q9HBT7 754 aa20.8■□□□□ 0.92
VPS51-213ENST00000533827 F5H6K3 240 aa20.79■□□□□ 0.92
VPS51-213ENST00000533827 PRDM1O75626 825 aa20.79■□□□□ 0.92
VPS51-213ENST00000533827 CNGA1P29973 690 aa20.79■□□□□ 0.92
VPS51-213ENST00000533827 KLRC3Q07444 240 aa20.79■□□□□ 0.92
VPS51-213ENST00000533827 REPS2Q8NFH8 660 aa20.79■□□□□ 0.92
VPS51-213ENST00000533827 NACAP1Q9BZK3 213 aa20.79■□□□□ 0.92
VPS51-213ENST00000533827 SLC5A4Q9NY91 659 aa20.79■□□□□ 0.92
VPS51-213ENST00000533827 STAP2Q9UGK3 403 aa20.79■□□□□ 0.92
VPS51-213ENST00000533827 ZNF214Q9UL59 606 aaPredicted RBP20.79■□□□□ 0.92
VPS51-213ENST00000533827 FCER1AP12319 257 aa20.78■□□□□ 0.92
VPS51-213ENST00000533827 STAT3P40763 770 aa20.78■□□□□ 0.92
VPS51-213ENST00000533827 MKL1Q969V6 931 aa20.78■□□□□ 0.92
VPS51-213ENST00000533827 NUP88Q99567 741 aaPredicted RBP20.78■□□□□ 0.92
VPS51-213ENST00000533827 CLIP2Q9UDT6 1046 aa20.78■□□□□ 0.92
VPS51-213ENST00000533827 ZNFX1Q9P2E3 1918 aaKnown RBP20.77■□□□□ 0.92
VPS51-213ENST00000533827 MYH4Q9Y623 1939 aa20.77■□□□□ 0.92
VPS51-213ENST00000533827 TRIOBPQ9H2D6 2365 aa20.77■□□□□ 0.92
VPS51-213ENST00000533827 A0A1W2PPC1 479 aa20.77■□□□□ 0.92
VPS51-213ENST00000533827 NDUFB10O96000 172 aa20.77■□□□□ 0.92
VPS51-213ENST00000533827 CEP95Q96GE4 821 aa20.77■□□□□ 0.92
VPS51-213ENST00000533827 MAML3Q96JK9 1138 aa20.77■□□□□ 0.92
VPS51-213ENST00000533827 GDF15Q99988 308 aa20.77■□□□□ 0.92
VPS51-213ENST00000533827 SLF1Q9BQI6 1058 aa20.77■□□□□ 0.92
VPS51-213ENST00000533827 NAPBQ9H115 298 aa20.77■□□□□ 0.92
VPS51-213ENST00000533827 MTMR4Q9NYA4 1195 aa20.77■□□□□ 0.92
VPS51-213ENST00000533827 ZBTB47Q9UFB7 747 aaPredicted RBP20.77■□□□□ 0.92
VPS51-213ENST00000533827 ZMYND8Q9ULU4 1186 aaPredicted RBP20.77■□□□□ 0.92
VPS51-213ENST00000533827 SZT2Q5T011 3432 aa20.77■□□□□ 0.92
VPS51-213ENST00000533827 PLIN4Q96Q06 1357 aa20.76■□□□□ 0.91
VPS51-213ENST00000533827 FOXP2O15409 715 aa20.76■□□□□ 0.91
VPS51-213ENST00000533827 PDE4BQ07343 736 aa20.76■□□□□ 0.91
VPS51-213ENST00000533827 PPARAQ07869 468 aa20.76■□□□□ 0.91
VPS51-213ENST00000533827 LRRC26Q2I0M4 334 aa20.76■□□□□ 0.91
VPS51-213ENST00000533827 NEDD1Q8NHV4 660 aa20.76■□□□□ 0.91
VPS51-213ENST00000533827 MMP19Q99542 508 aa20.76■□□□□ 0.91
VPS51-213ENST00000533827 SYNPO2Q9UMS6 1093 aa20.76■□□□□ 0.91
VPS51-213ENST00000533827 SEPT4O43236 478 aa20.75■□□□□ 0.91
VPS51-213ENST00000533827 SYN1P17600 705 aa20.75■□□□□ 0.91
VPS51-213ENST00000533827 BMP8BP34820 402 aa20.75■□□□□ 0.91
VPS51-213ENST00000533827 COPB2P35606 906 aa20.75■□□□□ 0.91
VPS51-213ENST00000533827 PDE1AP54750 535 aa20.75■□□□□ 0.91
VPS51-213ENST00000533827 CCDC129Q6ZRS4 1044 aa20.75■□□□□ 0.91
VPS51-213ENST00000533827 PRPF38AQ8NAV1 312 aaKnown RBP20.75■□□□□ 0.91
VPS51-213ENST00000533827 EVI5LQ96CN4 794 aa20.75■□□□□ 0.91
VPS51-213ENST00000533827 DNAH12Q6ZR08 3092 aa20.74■□□□□ 0.91
VPS51-213ENST00000533827 DNM1LO00429 736 aa20.74■□□□□ 0.91
VPS51-213ENST00000533827 TTLL1O95922 423 aa20.74■□□□□ 0.91
VPS51-213ENST00000533827 SLC3A2P08195 630 aaKnown RBP20.74■□□□□ 0.91
VPS51-213ENST00000533827 TSPY3P0CV98 308 aa20.74■□□□□ 0.91
VPS51-213ENST00000533827 TSPY8P0CW00 308 aa20.74■□□□□ 0.91
VPS51-213ENST00000533827 AAMPQ13685 434 aa20.74■□□□□ 0.91
VPS51-213ENST00000533827 KCTD2Q14681 263 aa20.74■□□□□ 0.91
VPS51-213ENST00000533827 ZNF792Q3KQV3 632 aa20.74■□□□□ 0.91
VPS51-213ENST00000533827 PRAMEF19Q5SWL8 479 aa20.74■□□□□ 0.91
VPS51-213ENST00000533827 GMCL1P1Q8NEA9 526 aa20.74■□□□□ 0.91
VPS51-213ENST00000533827 YTHDC1Q96MU7 727 aaKnown RBP20.74■□□□□ 0.91
VPS51-213ENST00000533827 SENP6Q9GZR1 1112 aaPredicted RBP20.74■□□□□ 0.91
VPS51-213ENST00000533827 DIS3Q9Y2L1 958 aaKnown RBP20.74■□□□□ 0.91
VPS51-213ENST00000533827 PGK2P07205 417 aa20.73■□□□□ 0.91
VPS51-213ENST00000533827 TFAP4Q01664 338 aa20.73■□□□□ 0.91
VPS51-213ENST00000533827 FAM47AQ5JRC9 791 aa20.73■□□□□ 0.91
VPS51-213ENST00000533827 TEX13BQ9BXU2 312 aa20.73■□□□□ 0.91
VPS51-213ENST00000533827 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.73■□□□□ 0.91
VPS51-213ENST00000533827 PLXNA1Q9UIW2 1896 aa20.73■□□□□ 0.91
VPS51-213ENST00000533827 ATP2A1O14983 1001 aa20.72■□□□□ 0.91
VPS51-213ENST00000533827 VPS53Q5VIR6 699 aa20.72■□□□□ 0.91
VPS51-213ENST00000533827 ANO1Q5XXA6 986 aa20.72■□□□□ 0.91
VPS51-213ENST00000533827 LRRC47Q8N1G4 583 aaKnown RBP20.72■□□□□ 0.91
VPS51-213ENST00000533827 HELLSQ9NRZ9 838 aa20.72■□□□□ 0.91
VPS51-213ENST00000533827 RIPK3Q9Y572 518 aa20.72■□□□□ 0.91
VPS51-213ENST00000533827 GJC2Q5T442 439 aaPredicted RBP20.71■□□□□ 0.91
VPS51-213ENST00000533827 SNRNP48Q6IEG0 339 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms