RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 BUB1BO60566 1050 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-236ENST00000533667 P4HA1P13674 534 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 HSPA1LP34931 641 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 LONP1P36776 959 aaKnown RBP7.73□□□□□ -1.17
CTNND1-236ENST00000533667 KRT71Q3SY84 523 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 DYMQ7RTS9 669 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 C8orf37Q96NL8 207 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 USP28Q96RU2 1077 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 BTG4Q9NY30 223 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 PPP2R2CQ9Y2T4 447 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 CLASP1Q7Z460 1538 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 CRCPO75575 148 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 GCKP35557 465 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 TRAPPC10P48553 1259 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 TYW1BQ6NUM6 668 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 C2CD5Q86YS7 1000 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 LRRC8AQ8IWT6 810 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 FANCBQ8NB91 859 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 TBC1D31Q96DN5 1066 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 NBPF3Q9H094 633 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 VPS54Q9P1Q0 977 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 CCNL1Q9UK58 526 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-236ENST00000533667 SMCO2A6NFE2 343 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 CTSWP56202 376 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 IRX4P78413 519 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 CCDC38Q502W7 563 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 MAP3K21Q5TCX8 1036 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 OTUD6AQ7L8S5 288 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 SDCCAG8Q86SQ7 713 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-236ENST00000533667 CCDC125Q86Z20 511 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 BBOF1Q8ND07 529 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 TDRD7Q8NHU6 1098 aaKnown RBP7.73□□□□□ -1.17
CTNND1-236ENST00000533667 CHURC1Q8WUH1 139 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 ATP2A3Q93084 1043 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 ZNF496Q96IT1 587 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-236ENST00000533667 MYL10Q9BUA6 226 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 RTEL1Q9NZ71 1219 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 DDX41Q9UJV9 622 aaKnown RBP7.73□□□□□ -1.17
CTNND1-236ENST00000533667 ADCY9O60503 1353 aa7.73□□□□□ -1.17
CTNND1-236ENST00000533667 TTC36A6NLP5 189 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 RGS16O15492 202 aaPredicted RBP7.72□□□□□ -1.17
CTNND1-236ENST00000533667 PPP6R2O75170 966 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 A1BGP04217 495 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 HSPD1P10809 573 aaKnown RBP7.72□□□□□ -1.17
CTNND1-236ENST00000533667 UBE3CQ15386 1083 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 LONRF2Q1L5Z9 754 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 PPP1R21Q6ZMI0 780 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 IFNL3Q8IZI9 196 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 AZI2Q9H6S1 392 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 COPRSQ9NQ92 184 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 GEMIN8Q9NWZ8 242 aaKnown RBP7.72□□□□□ -1.17
CTNND1-236ENST00000533667 GIPC1O14908 333 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 DAPK3O43293 454 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 NR1I2O75469 434 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 TROVE2P10155 538 aaKnown RBP eCLIP7.72□□□□□ -1.17
CTNND1-236ENST00000533667 KRT15P19012 456 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 TAF12Q16514 161 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 TRMT44Q8IYL2 757 aaKnown RBP7.72□□□□□ -1.17
CTNND1-236ENST00000533667 TRMT2AQ8IZ69 625 aaKnown RBP7.72□□□□□ -1.17
CTNND1-236ENST00000533667 FAM71BQ8TC56 605 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 MIS12Q9H081 205 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 FAM207AQ9NSI2 230 aaPredicted RBP7.72□□□□□ -1.17
CTNND1-236ENST00000533667 TYW1Q9NV66 732 aaKnown RBP7.72□□□□□ -1.17
CTNND1-236ENST00000533667 ARHGEF5Q12774 1597 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 CASQ2O14958 399 aaPredicted RBP7.72□□□□□ -1.17
CTNND1-236ENST00000533667 CIAO1O76071 339 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 PCCAP05165 728 aaPredicted RBP7.72□□□□□ -1.17
CTNND1-236ENST00000533667 OR52Z1P0C646 297 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 PHBP35232 272 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 RNASE9P60153 205 aaKnown RBP7.72□□□□□ -1.17
CTNND1-236ENST00000533667 ANKRD20A3Q5VUR7 823 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 NLRX1Q86UT6 975 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 C17orf53Q8N3J3 647 aaPredicted RBP7.72□□□□□ -1.17
CTNND1-236ENST00000533667 GSDMAQ96QA5 445 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 RAB3IPQ96QF0 476 aaPredicted RBP7.72□□□□□ -1.17
CTNND1-236ENST00000533667 LSM14BQ9BX40 385 aaKnown RBP7.72□□□□□ -1.17
CTNND1-236ENST00000533667 TRIM31Q9BZY9 425 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 TPCN1Q9ULQ1 816 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 BZW2Q9Y6E2 419 aaKnown RBP7.72□□□□□ -1.17
CTNND1-236ENST00000533667 NCKAP5LQ9HCH0 1330 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 A0A0D9SFI3 127 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 UBAP1LF5GYI3 381 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 IKBKBO14920 756 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 IGSF3O75054 1194 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 HARSP12081 509 aaKnown RBP7.72□□□□□ -1.17
CTNND1-236ENST00000533667 CNGA1P29973 690 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 NT5C2P49902 561 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 ZNF131P52739 623 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 SP4Q02446 784 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 DPP8Q6V1X1 898 aaPredicted RBP7.72□□□□□ -1.17
CTNND1-236ENST00000533667 NEK8Q86SG6 692 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 RETREG2Q8NC44 543 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 RABGGTAQ92696 567 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 MAP4K1Q92918 833 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 BLZF1Q9H2G9 400 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 PKD2L1Q9P0L9 805 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 ARMCX3Q9UH62 379 aaPredicted RBP7.72□□□□□ -1.17
CTNND1-236ENST00000533667 JAG2Q9Y219 1238 aa7.72□□□□□ -1.17
CTNND1-236ENST00000533667 NOP56O00567 594 aaKnown RBP7.71□□□□□ -1.17
CTNND1-236ENST00000533667 SCG2P13521 617 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 168.2 ms