RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 UBAC1Q9BSL1 405 aa14.1□□□□□ -0.15
SSBP3-214ENST00000533209 ARHGAP39Q9C0H5 1083 aa14.1□□□□□ -0.15
SSBP3-214ENST00000533209 HOXC10Q9NYD6 342 aa14.1□□□□□ -0.15
SSBP3-214ENST00000533209 RABGAP1Q9Y3P9 1069 aa14.1□□□□□ -0.15
SSBP3-214ENST00000533209 CASP8AP2Q9UKL3 1982 aa14.1□□□□□ -0.15
SSBP3-214ENST00000533209 MYPNQ86TC9 1320 aa14.1□□□□□ -0.15
SSBP3-214ENST00000533209 BMP3P12645 472 aa14.09□□□□□ -0.15
SSBP3-214ENST00000533209 HSPA4P34932 840 aa14.09□□□□□ -0.15
SSBP3-214ENST00000533209 CHST3Q7LGC8 479 aa14.09□□□□□ -0.15
SSBP3-214ENST00000533209 CTU1Q7Z7A3 348 aaKnown RBP14.09□□□□□ -0.15
SSBP3-214ENST00000533209 CHMP4CQ96CF2 233 aa14.09□□□□□ -0.15
SSBP3-214ENST00000533209 ATG4CQ96DT6 458 aa14.09□□□□□ -0.15
SSBP3-214ENST00000533209 PAGR1Q9BTK6 254 aa14.09□□□□□ -0.15
SSBP3-214ENST00000533209 USP26Q9BXU7 913 aa14.09□□□□□ -0.15
SSBP3-214ENST00000533209 BTBD7Q9P203 1132 aa14.09□□□□□ -0.15
SSBP3-214ENST00000533209 PPP1R9AQ9ULJ8 1098 aa14.09□□□□□ -0.15
SSBP3-214ENST00000533209 ADAMTS5Q9UNA0 930 aa14.09□□□□□ -0.15
SSBP3-214ENST00000533209 MYH4Q9Y623 1939 aa14.08□□□□□ -0.16
SSBP3-214ENST00000533209 SLC1A4P43007 532 aa14.08□□□□□ -0.16
SSBP3-214ENST00000533209 PSMC4P43686 418 aa14.08□□□□□ -0.16
SSBP3-214ENST00000533209 ERVK-9P63128 1117 aa14.08□□□□□ -0.16
SSBP3-214ENST00000533209 ERVK-24P63145 666 aa14.08□□□□□ -0.16
SSBP3-214ENST00000533209 KIF22Q14807 665 aa14.08□□□□□ -0.16
SSBP3-214ENST00000533209 Q3C1V9 767 aa14.08□□□□□ -0.16
SSBP3-214ENST00000533209 OTOP1Q7RTM1 612 aa14.08□□□□□ -0.16
SSBP3-214ENST00000533209 PNMA1Q8ND90 353 aa14.08□□□□□ -0.16
SSBP3-214ENST00000533209 GPRC5AQ8NFJ5 357 aa14.08□□□□□ -0.16
SSBP3-214ENST00000533209 DCAF4Q8WV16 495 aa14.08□□□□□ -0.16
SSBP3-214ENST00000533209 TRIM47Q96LD4 638 aa14.08□□□□□ -0.16
SSBP3-214ENST00000533209 SLF1Q9BQI6 1058 aa14.08□□□□□ -0.16
SSBP3-214ENST00000533209 EFCC1Q9HA90 598 aa14.08□□□□□ -0.16
SSBP3-214ENST00000533209 MTMR7Q9Y216 660 aa14.08□□□□□ -0.16
SSBP3-214ENST00000533209 SNX14Q9Y5W7 946 aa14.08□□□□□ -0.16
SSBP3-214ENST00000533209 RLFQ13129 1914 aa14.07□□□□□ -0.16
SSBP3-214ENST00000533209 TMEM232C9JQI7 657 aa14.07□□□□□ -0.16
SSBP3-214ENST00000533209 IFIT3O14879 490 aaKnown RBP14.07□□□□□ -0.16
SSBP3-214ENST00000533209 PRC1O43663 620 aa14.07□□□□□ -0.16
SSBP3-214ENST00000533209 ECM2O94769 699 aaPredicted RBP14.07□□□□□ -0.16
SSBP3-214ENST00000533209 SNHG28P0DPA3 235 aa14.07□□□□□ -0.16
SSBP3-214ENST00000533209 PDHBP11177 359 aa14.07□□□□□ -0.16
SSBP3-214ENST00000533209 ZKSCAN1P17029 563 aaPredicted RBP14.07□□□□□ -0.16
SSBP3-214ENST00000533209 ADCK5Q3MIX3 580 aa14.07□□□□□ -0.16
SSBP3-214ENST00000533209 IFIT1BQ5T764 474 aaKnown RBP14.07□□□□□ -0.16
SSBP3-214ENST00000533209 SAMD1Q6SPF0 538 aaPredicted RBP14.07□□□□□ -0.16
SSBP3-214ENST00000533209 KCTD1Q719H9 257 aa14.07□□□□□ -0.16
SSBP3-214ENST00000533209 MB21D1Q8N884 522 aa14.07□□□□□ -0.16
SSBP3-214ENST00000533209 IGDCC4Q8TDY8 1250 aa14.07□□□□□ -0.16
SSBP3-214ENST00000533209 NEK1Q96PY6 1258 aa14.07□□□□□ -0.16
SSBP3-214ENST00000533209 KAT14Q9H8E8 782 aa14.07□□□□□ -0.16
SSBP3-214ENST00000533209 SENP2Q9HC62 589 aa14.07□□□□□ -0.16
SSBP3-214ENST00000533209 FEM1BQ9UK73 627 aa14.07□□□□□ -0.16
SSBP3-214ENST00000533209 TRIM17Q9Y577 477 aa14.07□□□□□ -0.16
SSBP3-214ENST00000533209 VWA5AO00534 786 aa14.06□□□□□ -0.16
SSBP3-214ENST00000533209 PLA2G6O60733 806 aa14.06□□□□□ -0.16
SSBP3-214ENST00000533209 MCM5P33992 734 aa14.06□□□□□ -0.16
SSBP3-214ENST00000533209 FCGRTP55899 365 aa14.06□□□□□ -0.16
SSBP3-214ENST00000533209 KRT32Q14532 448 aa14.06□□□□□ -0.16
SSBP3-214ENST00000533209 ARHGEF6Q15052 776 aa14.06□□□□□ -0.16
SSBP3-214ENST00000533209 TMEM67Q5HYA8 995 aa14.06□□□□□ -0.16
SSBP3-214ENST00000533209 PRPF38AQ8NAV1 312 aaKnown RBP14.06□□□□□ -0.16
SSBP3-214ENST00000533209 REPS2Q8NFH8 660 aa14.06□□□□□ -0.16
SSBP3-214ENST00000533209 MTA3Q9BTC8 594 aa14.06□□□□□ -0.16
SSBP3-214ENST00000533209 PORCNQ9H237 461 aa14.06□□□□□ -0.16
SSBP3-214ENST00000533209 GPHNQ9NQX3 736 aaPredicted RBP14.06□□□□□ -0.16
SSBP3-214ENST00000533209 ERICH2A1L162 156 aa14.05□□□□□ -0.16
SSBP3-214ENST00000533209 FMNL1O95466 1100 aaPredicted RBP14.05□□□□□ -0.16
SSBP3-214ENST00000533209 GNRH1P01148 92 aa14.05□□□□□ -0.16
SSBP3-214ENST00000533209 STAT2P52630 851 aa14.05□□□□□ -0.16
SSBP3-214ENST00000533209 EXOSC10Q01780 885 aaKnown RBP14.05□□□□□ -0.16
SSBP3-214ENST00000533209 ZNF543Q08ER8 600 aa14.05□□□□□ -0.16
SSBP3-214ENST00000533209 TMEM132BQ14DG7 1078 aa14.05□□□□□ -0.16
SSBP3-214ENST00000533209 WTAPQ15007 396 aa14.05□□□□□ -0.16
SSBP3-214ENST00000533209 SART3Q15020 963 aaKnown RBP14.05□□□□□ -0.16
SSBP3-214ENST00000533209 CCDC96Q2M329 555 aa14.05□□□□□ -0.16
SSBP3-214ENST00000533209 C8orf34Q49A92 452 aa14.05□□□□□ -0.16
SSBP3-214ENST00000533209 TTBK2Q6IQ55 1244 aa14.05□□□□□ -0.16
SSBP3-214ENST00000533209 BTNL9Q6UXG8 535 aa14.05□□□□□ -0.16
SSBP3-214ENST00000533209 FAM160B2Q86V87 743 aa14.05□□□□□ -0.16
SSBP3-214ENST00000533209 CHURC1Q8WUH1 139 aa14.05□□□□□ -0.16
SSBP3-214ENST00000533209 KIFC2Q96AC6 838 aa14.05□□□□□ -0.16
SSBP3-214ENST00000533209 MCOLN1Q9GZU1 580 aa14.05□□□□□ -0.16
SSBP3-214ENST00000533209 SPATC1LQ9H0A9 340 aa14.05□□□□□ -0.16
SSBP3-214ENST00000533209 LY9Q9HBG7 655 aa14.05□□□□□ -0.16
SSBP3-214ENST00000533209 ISY1Q9ULR0 285 aaKnown RBP14.05□□□□□ -0.16
SSBP3-214ENST00000533209 A0A0G2JMZ2 1700 aa14.04□□□□□ -0.16
SSBP3-214ENST00000533209 ZSWIM8A7E2V4 1837 aa14.04□□□□□ -0.16
SSBP3-214ENST00000533209 SH2B2O14492 632 aaPredicted RBP14.04□□□□□ -0.16
SSBP3-214ENST00000533209 SEC24BO95487 1268 aa14.04□□□□□ -0.16
SSBP3-214ENST00000533209 CCNA1P78396 465 aa14.04□□□□□ -0.16
SSBP3-214ENST00000533209 TMEM87BQ96K49 555 aa14.04□□□□□ -0.16
SSBP3-214ENST00000533209 MOV10L1Q9BXT6 1211 aaKnown RBP14.04□□□□□ -0.16
SSBP3-214ENST00000533209 SLC38A10Q9HBR0 1119 aa14.04□□□□□ -0.16
SSBP3-214ENST00000533209 GPCPD1Q9NPB8 672 aa14.04□□□□□ -0.16
SSBP3-214ENST00000533209 SRRDQ9UH36 339 aa14.04□□□□□ -0.16
SSBP3-214ENST00000533209 ZNF214Q9UL59 606 aaPredicted RBP14.04□□□□□ -0.16
SSBP3-214ENST00000533209 PTPN22Q9Y2R2 807 aa14.04□□□□□ -0.16
SSBP3-214ENST00000533209 FRMPD2Q68DX3 1309 aaPredicted RBP14.04□□□□□ -0.16
SSBP3-214ENST00000533209 WDR19Q8NEZ3 1342 aa14.04□□□□□ -0.16
SSBP3-214ENST00000533209 HTTP42858 3142 aa14.04□□□□□ -0.16
SSBP3-214ENST00000533209 TNPO2O14787 897 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms