RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 FRMPD3Q5JV73 1810 aa22.61■■□□□ 1.21
SSH3-209ENST00000532600 SMC5Q8IY18 1101 aa22.61■■□□□ 1.21
SSH3-209ENST00000532600 ANKLE1Q8NAG6 615 aa22.61■■□□□ 1.21
SSH3-209ENST00000532600 REPS2Q8NFH8 660 aa22.61■■□□□ 1.21
SSH3-209ENST00000532600 TACC3Q9Y6A5 838 aa22.61■■□□□ 1.21
SSH3-209ENST00000532600 MYH4Q9Y623 1939 aa22.61■■□□□ 1.21
SSH3-209ENST00000532600 COBLO75128 1261 aa22.6■■□□□ 1.21
SSH3-209ENST00000532600 ADORA2AP29274 412 aa22.6■■□□□ 1.21
SSH3-209ENST00000532600 VPS53Q5VIR6 699 aa22.6■■□□□ 1.21
SSH3-209ENST00000532600 SAMD1Q6SPF0 538 aaPredicted RBP22.6■■□□□ 1.21
SSH3-209ENST00000532600 TRPV1Q8NER1 839 aa22.6■■□□□ 1.21
SSH3-209ENST00000532600 CEP95Q96GE4 821 aa22.6■■□□□ 1.21
SSH3-209ENST00000532600 LNPKQ9C0E8 428 aa22.6■■□□□ 1.21
SSH3-209ENST00000532600 GOPCQ9HD26 462 aa22.6■■□□□ 1.21
SSH3-209ENST00000532600 PPP1R9AQ9ULJ8 1098 aa22.6■■□□□ 1.21
SSH3-209ENST00000532600 IVNS1ABPQ9Y6Y0 642 aa22.6■■□□□ 1.21
SSH3-209ENST00000532600 NDUFB10O96000 172 aa22.59■■□□□ 1.21
SSH3-209ENST00000532600 PPARAQ07869 468 aa22.59■■□□□ 1.21
SSH3-209ENST00000532600 PLS1Q14651 629 aa22.59■■□□□ 1.21
SSH3-209ENST00000532600 EVI5LQ96CN4 794 aa22.59■■□□□ 1.21
SSH3-209ENST00000532600 INCENPQ9NQS7 918 aa22.59■■□□□ 1.21
SSH3-209ENST00000532600 PLIN4Q96Q06 1357 aa22.59■■□□□ 1.21
SSH3-209ENST00000532600 F5H6K3 240 aa22.58■■□□□ 1.21
SSH3-209ENST00000532600 VWA5AO00534 786 aa22.58■■□□□ 1.21
SSH3-209ENST00000532600 STRNO43815 780 aa22.58■■□□□ 1.21
SSH3-209ENST00000532600 CYP2C19P33261 490 aa22.58■■□□□ 1.21
SSH3-209ENST00000532600 KLRC3Q07444 240 aa22.58■■□□□ 1.21
SSH3-209ENST00000532600 NECAB2Q7Z6G3 386 aa22.58■■□□□ 1.21
SSH3-209ENST00000532600 NACAP1Q9BZK3 213 aa22.58■■□□□ 1.21
SSH3-209ENST00000532600 NAPBQ9H115 298 aa22.58■■□□□ 1.21
SSH3-209ENST00000532600 MTMR4Q9NYA4 1195 aa22.58■■□□□ 1.21
SSH3-209ENST00000532600 CLIP2Q9UDT6 1046 aa22.58■■□□□ 1.21
SSH3-209ENST00000532600 ZNF214Q9UL59 606 aaPredicted RBP22.58■■□□□ 1.21
SSH3-209ENST00000532600 RAD21O60216 631 aa22.57■■□□□ 1.2
SSH3-209ENST00000532600 FAM47AQ5JRC9 791 aa22.57■■□□□ 1.2
SSH3-209ENST00000532600 NCAPG2Q86XI2 1143 aa22.57■■□□□ 1.2
SSH3-209ENST00000532600 ZNF444Q8N0Y2 327 aaPredicted RBP22.57■■□□□ 1.2
SSH3-209ENST00000532600 NEDD1Q8NHV4 660 aa22.57■■□□□ 1.2
SSH3-209ENST00000532600 MKL1Q969V6 931 aa22.57■■□□□ 1.2
SSH3-209ENST00000532600 FAM227BQ96M60 508 aa22.57■■□□□ 1.2
SSH3-209ENST00000532600 PRO3102Q9H379 93 aa22.57■■□□□ 1.2
SSH3-209ENST00000532600 RWDD1Q9H446 243 aaPredicted RBP22.57■■□□□ 1.2
SSH3-209ENST00000532600 MROH8Q9H579 483 aa22.57■■□□□ 1.2
SSH3-209ENST00000532600 ZBTB47Q9UFB7 747 aaPredicted RBP22.57■■□□□ 1.2
SSH3-209ENST00000532600 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.57■■□□□ 1.2
SSH3-209ENST00000532600 ZNFX1Q9P2E3 1918 aaKnown RBP22.57■■□□□ 1.2
SSH3-209ENST00000532600 PFASO15067 1338 aa22.57■■□□□ 1.2
SSH3-209ENST00000532600 A0A0D9SFI3 127 aa22.56■■□□□ 1.2
SSH3-209ENST00000532600 MFSD14CQ5VZR4 134 aa22.56■■□□□ 1.2
SSH3-209ENST00000532600 B4GALNT3Q6L9W6 998 aa22.56■■□□□ 1.2
SSH3-209ENST00000532600 CHRDL2Q6WN34 429 aa22.56■■□□□ 1.2
SSH3-209ENST00000532600 NBPF3Q9H094 633 aa22.56■■□□□ 1.2
SSH3-209ENST00000532600 RANBP2P49792 3224 aaKnown RBP22.55■■□□□ 1.2
SSH3-209ENST00000532600 TRIOBPQ9H2D6 2365 aa22.55■■□□□ 1.2
SSH3-209ENST00000532600 COL6A1P12109 1028 aa22.55■■□□□ 1.2
SSH3-209ENST00000532600 CYBAP13498 195 aa22.55■■□□□ 1.2
SSH3-209ENST00000532600 CTDSPL2Q05D32 466 aa22.55■■□□□ 1.2
SSH3-209ENST00000532600 OLFML2BQ68BL8 750 aa22.55■■□□□ 1.2
SSH3-209ENST00000532600 DPP9Q86TI2 863 aa22.55■■□□□ 1.2
SSH3-209ENST00000532600 RIOX2Q8IUF8 465 aa22.55■■□□□ 1.2
SSH3-209ENST00000532600 ABRAQ8N0Z2 381 aa22.55■■□□□ 1.2
SSH3-209ENST00000532600 LRRC47Q8N1G4 583 aaKnown RBP22.55■■□□□ 1.2
SSH3-209ENST00000532600 TFAP4Q01664 338 aa22.54■■□□□ 1.2
SSH3-209ENST00000532600 PLEKHM2Q8IWE5 1019 aa22.54■■□□□ 1.2
SSH3-209ENST00000532600 SLF1Q9BQI6 1058 aa22.54■■□□□ 1.2
SSH3-209ENST00000532600 C11orf49Q9H6J7 331 aa22.54■■□□□ 1.2
SSH3-209ENST00000532600 ZNF287Q9HBT7 754 aa22.54■■□□□ 1.2
SSH3-209ENST00000532600 HELLSQ9NRZ9 838 aa22.54■■□□□ 1.2
SSH3-209ENST00000532600 EVI5O60447 810 aa22.53■■□□□ 1.2
SSH3-209ENST00000532600 SLC25A27O95847 323 aa22.53■■□□□ 1.2
SSH3-209ENST00000532600 STAT3P40763 770 aa22.53■■□□□ 1.2
SSH3-209ENST00000532600 FXR1P51114 621 aaKnown RBP eCLIP22.53■■□□□ 1.2
SSH3-209ENST00000532600 NUCB1Q02818 461 aa22.53■■□□□ 1.2
SSH3-209ENST00000532600 PDE4BQ07343 736 aa22.53■■□□□ 1.2
SSH3-209ENST00000532600 ZNF589Q86UQ0 364 aaPredicted RBP22.53■■□□□ 1.2
SSH3-209ENST00000532600 CHD1LQ86WJ1 897 aa22.53■■□□□ 1.2
SSH3-209ENST00000532600 IL17RBQ9NRM6 502 aa22.53■■□□□ 1.2
SSH3-209ENST00000532600 RBM27Q9P2N5 1060 aaKnown RBP22.53■■□□□ 1.2
SSH3-209ENST00000532600 NR2E3Q9Y5X4 410 aa22.53■■□□□ 1.2
SSH3-209ENST00000532600 TTLL1O95922 423 aa22.52■■□□□ 1.2
SSH3-209ENST00000532600 TSPY3P0CV98 308 aa22.52■■□□□ 1.2
SSH3-209ENST00000532600 TSPY8P0CW00 308 aa22.52■■□□□ 1.2
SSH3-209ENST00000532600 NMIQ13287 307 aaPredicted RBP22.52■■□□□ 1.2
SSH3-209ENST00000532600 ALX1Q15699 326 aa22.52■■□□□ 1.2
SSH3-209ENST00000532600 GMCL1P1Q8NEA9 526 aa22.52■■□□□ 1.2
SSH3-209ENST00000532600 MAML3Q96JK9 1138 aa22.52■■□□□ 1.2
SSH3-209ENST00000532600 DDX20Q9UHI6 824 aaKnown RBP22.52■■□□□ 1.2
SSH3-209ENST00000532600 ANAPC4Q9UJX5 808 aa22.52■■□□□ 1.2
SSH3-209ENST00000532600 SYNPO2Q9UMS6 1093 aa22.52■■□□□ 1.2
SSH3-209ENST00000532600 RIPK3Q9Y572 518 aa22.52■■□□□ 1.2
SSH3-209ENST00000532600 NMT2O60551 498 aa22.51■■□□□ 1.19
SSH3-209ENST00000532600 NEFLP07196 543 aa22.51■■□□□ 1.19
SSH3-209ENST00000532600 PGK2P07205 417 aa22.51■■□□□ 1.19
SSH3-209ENST00000532600 FCER1AP12319 257 aa22.51■■□□□ 1.19
SSH3-209ENST00000532600 MCMDC2Q4G0Z9 681 aa22.51■■□□□ 1.19
SSH3-209ENST00000532600 PCDH10Q9P2E7 1040 aa22.51■■□□□ 1.19
SSH3-209ENST00000532600 PLXNA1Q9UIW2 1896 aa22.51■■□□□ 1.19
SSH3-209ENST00000532600 SLC3A2P08195 630 aaKnown RBP22.5■■□□□ 1.19
SSH3-209ENST00000532600 FGRP09769 529 aa22.5■■□□□ 1.19
SSH3-209ENST00000532600 PRAMEF19Q5SWL8 479 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms