RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 CABP5Q9NP86 173 aa10.93□□□□□ -0.66
USF1-210ENST00000531842 TMEM39AQ9NV64 488 aa10.93□□□□□ -0.66
USF1-210ENST00000531842 HDAC5Q9UQL6 1122 aa10.93□□□□□ -0.66
USF1-210ENST00000531842 TMEM265A0A087WTH1 108 aa10.92□□□□□ -0.66
USF1-210ENST00000531842 KIAA0355O15063 1070 aa10.92□□□□□ -0.66
USF1-210ENST00000531842 ADCY6O43306 1168 aa10.92□□□□□ -0.66
USF1-210ENST00000531842 FLOT1O75955 427 aa10.92□□□□□ -0.66
USF1-210ENST00000531842 POLR3DP05423 398 aaPredicted RBP10.92□□□□□ -0.66
USF1-210ENST00000531842 ACRP10323 421 aa10.92□□□□□ -0.66
USF1-210ENST00000531842 AKR1B1P15121 316 aa10.92□□□□□ -0.66
USF1-210ENST00000531842 PTGS1P23219 599 aa10.92□□□□□ -0.66
USF1-210ENST00000531842 DSG3P32926 999 aa10.92□□□□□ -0.66
USF1-210ENST00000531842 GABPAQ06546 454 aa10.92□□□□□ -0.66
USF1-210ENST00000531842 ADGRE1Q14246 886 aa10.92□□□□□ -0.66
USF1-210ENST00000531842 TACC3Q9Y6A5 838 aa10.92□□□□□ -0.66
USF1-210ENST00000531842 PRKAB2O43741 272 aa10.91□□□□□ -0.66
USF1-210ENST00000531842 ZNF865P0CJ78 1059 aaPredicted RBP10.91□□□□□ -0.66
USF1-210ENST00000531842 TTC6Q86TZ1 520 aa10.91□□□□□ -0.66
USF1-210ENST00000531842 LCORLQ8N3X6 602 aa10.91□□□□□ -0.66
USF1-210ENST00000531842 SSH3Q8TE77 659 aa10.91□□□□□ -0.66
USF1-210ENST00000531842 TIFAQ96CG3 184 aa10.91□□□□□ -0.66
USF1-210ENST00000531842 PBX4Q9BYU1 374 aa10.91□□□□□ -0.66
USF1-210ENST00000531842 GPR108Q9NPR9 543 aa10.91□□□□□ -0.66
USF1-210ENST00000531842 MCM9Q9NXL9 1143 aa10.91□□□□□ -0.66
USF1-210ENST00000531842 HOXC10Q9NYD6 342 aa10.91□□□□□ -0.66
USF1-210ENST00000531842 TRANK1O15050 2925 aa10.91□□□□□ -0.66
USF1-210ENST00000531842 SCN5AQ14524 2016 aa10.91□□□□□ -0.66
USF1-210ENST00000531842 SYNRGQ9UMZ2 1314 aa10.9□□□□□ -0.66
USF1-210ENST00000531842 MYH7P12883 1935 aa10.9□□□□□ -0.66
USF1-210ENST00000531842 MYH4Q9Y623 1939 aa10.9□□□□□ -0.66
USF1-210ENST00000531842 MAGEB6P1A0A0J9YX57 407 aa10.9□□□□□ -0.66
USF1-210ENST00000531842 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.9□□□□□ -0.66
USF1-210ENST00000531842 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.9□□□□□ -0.66
USF1-210ENST00000531842 STRNO43815 780 aa10.9□□□□□ -0.66
USF1-210ENST00000531842 ADAMTS4O75173 837 aa10.9□□□□□ -0.66
USF1-210ENST00000531842 RARBP10826 455 aa10.9□□□□□ -0.66
USF1-210ENST00000531842 FCER1AP12319 257 aa10.9□□□□□ -0.66
USF1-210ENST00000531842 CSF2RAP15509 400 aa10.9□□□□□ -0.66
USF1-210ENST00000531842 SLC4A3P48751 1232 aa10.9□□□□□ -0.66
USF1-210ENST00000531842 ATP8B2P98198 1209 aa10.9□□□□□ -0.66
USF1-210ENST00000531842 C1orf53Q5VUE5 145 aa10.9□□□□□ -0.66
USF1-210ENST00000531842 CCDC129Q6ZRS4 1044 aa10.9□□□□□ -0.66
USF1-210ENST00000531842 SHCBP1Q8NEM2 672 aa10.9□□□□□ -0.66
USF1-210ENST00000531842 ARHGAP45Q92619 1136 aa10.9□□□□□ -0.66
USF1-210ENST00000531842 SYMPKQ92797 1274 aaKnown RBP10.9□□□□□ -0.66
USF1-210ENST00000531842 ZNF512BQ96KM6 892 aaPredicted RBP10.9□□□□□ -0.66
USF1-210ENST00000531842 MMP19Q99542 508 aa10.9□□□□□ -0.66
USF1-210ENST00000531842 NUP88Q99567 741 aaPredicted RBP10.9□□□□□ -0.66
USF1-210ENST00000531842 TINF2Q9BSI4 451 aa10.9□□□□□ -0.66
USF1-210ENST00000531842 PPP1R12CQ9BZL4 782 aa10.9□□□□□ -0.66
USF1-210ENST00000531842 ARMT1Q9H993 441 aa10.9□□□□□ -0.66
USF1-210ENST00000531842 DDX49Q9Y6V7 483 aaKnown RBP10.9□□□□□ -0.66
USF1-210ENST00000531842 PRRC2BQ5JSZ5 2229 aaKnown RBP10.9□□□□□ -0.66
USF1-210ENST00000531842 RAD21O60216 631 aa10.89□□□□□ -0.67
USF1-210ENST00000531842 PDE6AP16499 860 aa10.89□□□□□ -0.67
USF1-210ENST00000531842 IGFBP4P22692 258 aa10.89□□□□□ -0.67
USF1-210ENST00000531842 ACLYP53396 1101 aa10.89□□□□□ -0.67
USF1-210ENST00000531842 KCNA10Q16322 511 aa10.89□□□□□ -0.67
USF1-210ENST00000531842 ZNF792Q3KQV3 632 aa10.89□□□□□ -0.67
USF1-210ENST00000531842 TMEM240Q5SV17 173 aa10.89□□□□□ -0.67
USF1-210ENST00000531842 ADAMTS19Q8TE59 1207 aa10.89□□□□□ -0.67
USF1-210ENST00000531842 MROH8Q9H579 483 aa10.89□□□□□ -0.67
USF1-210ENST00000531842 IL1RAPL2Q9NP60 686 aa10.89□□□□□ -0.67
USF1-210ENST00000531842 CXXC1Q9P0U4 656 aaPredicted RBP10.89□□□□□ -0.67
USF1-210ENST00000531842 EXOC6BQ9Y2D4 811 aa10.89□□□□□ -0.67
USF1-210ENST00000531842 UMODL1Q5DID0 1318 aa10.88□□□□□ -0.67
USF1-210ENST00000531842 ZNF532Q9HCE3 1301 aa10.88□□□□□ -0.67
USF1-210ENST00000531842 SNAI1O95863 264 aaPredicted RBP10.88□□□□□ -0.67
USF1-210ENST00000531842 RLBP1P12271 317 aa10.88□□□□□ -0.67
USF1-210ENST00000531842 MYOGP15173 224 aa10.88□□□□□ -0.67
USF1-210ENST00000531842 TFF2Q03403 129 aa10.88□□□□□ -0.67
USF1-210ENST00000531842 ICA1Q05084 483 aa10.88□□□□□ -0.67
USF1-210ENST00000531842 DIEXFQ68CQ4 756 aaKnown RBP10.88□□□□□ -0.67
USF1-210ENST00000531842 ZNF365Q70YC5 407 aa10.88□□□□□ -0.67
USF1-210ENST00000531842 RNF180Q86T96 592 aa10.88□□□□□ -0.67
USF1-210ENST00000531842 AACSQ86V21 672 aa10.88□□□□□ -0.67
USF1-210ENST00000531842 STK11IPQ8N1F8 1099 aa10.88□□□□□ -0.67
USF1-210ENST00000531842 MICALL1Q8N3F8 863 aa10.88□□□□□ -0.67
USF1-210ENST00000531842 ASB2Q96Q27 587 aa10.88□□□□□ -0.67
USF1-210ENST00000531842 NKX2-4Q9H2Z4 354 aa10.88□□□□□ -0.67
USF1-210ENST00000531842 VCPKMTQ9H867 229 aa10.88□□□□□ -0.67
USF1-210ENST00000531842 DCP1AQ9NPI6 582 aaPredicted RBP10.88□□□□□ -0.67
USF1-210ENST00000531842 STARD7Q9NQZ5 370 aa10.88□□□□□ -0.67
USF1-210ENST00000531842 TBX21Q9UL17 535 aa10.88□□□□□ -0.67
USF1-210ENST00000531842 YBX2Q9Y2T7 364 aaKnown RBP10.88□□□□□ -0.67
USF1-210ENST00000531842 RIPK3Q9Y572 518 aa10.88□□□□□ -0.67
USF1-210ENST00000531842 GREB1LQ9C091 1923 aaPredicted RBP10.88□□□□□ -0.67
USF1-210ENST00000531842 TCRBV5S4A2TA0A5A2 114 aa10.87□□□□□ -0.67
USF1-210ENST00000531842 APBB1O00213 710 aa10.87□□□□□ -0.67
USF1-210ENST00000531842 TIMP1P01033 207 aa10.87□□□□□ -0.67
USF1-210ENST00000531842 CT47B1P0C2W7 299 aaPredicted RBP10.87□□□□□ -0.67
USF1-210ENST00000531842 EEF2P13639 858 aaKnown RBP10.87□□□□□ -0.67
USF1-210ENST00000531842 CYP2C18P33260 490 aa10.87□□□□□ -0.67
USF1-210ENST00000531842 RABGGTBP53611 331 aa10.87□□□□□ -0.67
USF1-210ENST00000531842 MAP3K12Q12852 859 aa10.87□□□□□ -0.67
USF1-210ENST00000531842 FAM83BQ5T0W9 1011 aa10.87□□□□□ -0.67
USF1-210ENST00000531842 SLC9C2Q5TAH2 1124 aa10.87□□□□□ -0.67
USF1-210ENST00000531842 CCSAPQ6IQ19 270 aaPredicted RBP10.87□□□□□ -0.67
USF1-210ENST00000531842 ANKRD33Q7Z3H0 272 aa10.87□□□□□ -0.67
USF1-210ENST00000531842 REPS2Q8NFH8 660 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms