RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 FCER1AP12319 257 aa17.36■□□□□ 0.37
CTSB-221ENST00000531502 ADCYAP1R1P41586 468 aa17.36■□□□□ 0.37
CTSB-221ENST00000531502 SHHQ15465 462 aa17.36■□□□□ 0.37
CTSB-221ENST00000531502 TRIM60Q495X7 471 aa17.36■□□□□ 0.37
CTSB-221ENST00000531502 FAM47AQ5JRC9 791 aa17.36■□□□□ 0.37
CTSB-221ENST00000531502 C9orf50Q5SZB4 431 aa17.36■□□□□ 0.37
CTSB-221ENST00000531502 HAUS7Q99871 368 aa17.36■□□□□ 0.37
CTSB-221ENST00000531502 SH2D4AQ9H788 454 aa17.36■□□□□ 0.37
CTSB-221ENST00000531502 PDLIM7Q9NR12 457 aa17.36■□□□□ 0.37
CTSB-221ENST00000531502 FBXO28Q9NVF7 368 aa17.36■□□□□ 0.37
CTSB-221ENST00000531502 MYH7P12883 1935 aa17.36■□□□□ 0.37
CTSB-221ENST00000531502 ZBED9Q6R2W3 1325 aa17.36■□□□□ 0.37
CTSB-221ENST00000531502 TRIM43BA6NCK2 446 aa17.35■□□□□ 0.37
CTSB-221ENST00000531502 RAB11FIP3O75154 756 aa17.35■□□□□ 0.37
CTSB-221ENST00000531502 SLC25A27O95847 323 aa17.35■□□□□ 0.37
CTSB-221ENST00000531502 EEF2P13639 858 aaKnown RBP17.35■□□□□ 0.37
CTSB-221ENST00000531502 SH3RF1Q7Z6J0 888 aa17.35■□□□□ 0.37
CTSB-221ENST00000531502 RIOX2Q8IUF8 465 aa17.35■□□□□ 0.37
CTSB-221ENST00000531502 REPS2Q8NFH8 660 aa17.35■□□□□ 0.37
CTSB-221ENST00000531502 BADQ92934 168 aa17.35■□□□□ 0.37
CTSB-221ENST00000531502 TRIM43Q96BQ3 446 aaPredicted RBP17.35■□□□□ 0.37
CTSB-221ENST00000531502 FAM161BQ96MY7 647 aa17.35■□□□□ 0.37
CTSB-221ENST00000531502 NRBP1Q9UHY1 535 aa17.35■□□□□ 0.37
CTSB-221ENST00000531502 PLXNA1Q9UIW2 1896 aa17.35■□□□□ 0.37
CTSB-221ENST00000531502 GREB1LQ9C091 1923 aaPredicted RBP17.35■□□□□ 0.37
CTSB-221ENST00000531502 HMMRO75330 724 aa17.34■□□□□ 0.37
CTSB-221ENST00000531502 UBE3CQ15386 1083 aa17.34■□□□□ 0.37
CTSB-221ENST00000531502 ZNF792Q3KQV3 632 aa17.34■□□□□ 0.37
CTSB-221ENST00000531502 CTR9Q6PD62 1173 aa17.34■□□□□ 0.37
CTSB-221ENST00000531502 FERMT2Q96AC1 680 aa17.34■□□□□ 0.37
CTSB-221ENST00000531502 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.34■□□□□ 0.37
CTSB-221ENST00000531502 KANSL2Q9H9L4 492 aa17.34■□□□□ 0.37
CTSB-221ENST00000531502 PRDM5Q9NQX1 630 aaPredicted RBP17.34■□□□□ 0.37
CTSB-221ENST00000531502 PHF24Q9UPV7 400 aa17.34■□□□□ 0.37
CTSB-221ENST00000531502 DIS3Q9Y2L1 958 aaKnown RBP17.34■□□□□ 0.37
CTSB-221ENST00000531502 ROBO3Q96MS0 1386 aa17.33■□□□□ 0.36
CTSB-221ENST00000531502 VWA5AO00534 786 aa17.33■□□□□ 0.36
CTSB-221ENST00000531502 PGK2P07205 417 aa17.33■□□□□ 0.36
CTSB-221ENST00000531502 MS4A1P11836 297 aa17.33■□□□□ 0.36
CTSB-221ENST00000531502 TAL1P17542 331 aaPredicted RBP17.33■□□□□ 0.36
CTSB-221ENST00000531502 ITGB8P26012 769 aa17.33■□□□□ 0.36
CTSB-221ENST00000531502 ZNF697Q5TEC3 545 aa17.33■□□□□ 0.36
CTSB-221ENST00000531502 SAMD1Q6SPF0 538 aaPredicted RBP17.33■□□□□ 0.36
CTSB-221ENST00000531502 MIER1Q8N108 512 aa17.33■□□□□ 0.36
CTSB-221ENST00000531502 MMP19Q99542 508 aa17.33■□□□□ 0.36
CTSB-221ENST00000531502 TINF2Q9BSI4 451 aa17.33■□□□□ 0.36
CTSB-221ENST00000531502 COL25A1Q9BXS0 654 aaPredicted RBP17.33■□□□□ 0.36
CTSB-221ENST00000531502 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.33■□□□□ 0.365e-7■□□□□ 10.3
CTSB-221ENST00000531502 PUS7LQ9H0K6 701 aaKnown RBP17.33■□□□□ 0.36
CTSB-221ENST00000531502 ZNF214Q9UL59 606 aaPredicted RBP17.33■□□□□ 0.36
CTSB-221ENST00000531502 PPP1R9AQ9ULJ8 1098 aa17.33■□□□□ 0.36
CTSB-221ENST00000531502 DDX19BQ9UMR2 479 aa17.33■□□□□ 0.36
CTSB-221ENST00000531502 COG6Q9Y2V7 657 aa17.33■□□□□ 0.36
CTSB-221ENST00000531502 MYCNP04198 464 aaPredicted RBP17.32■□□□□ 0.36
CTSB-221ENST00000531502 ZNF865P0CJ78 1059 aaPredicted RBP17.32■□□□□ 0.36
CTSB-221ENST00000531502 STAT3P40763 770 aa17.32■□□□□ 0.36
CTSB-221ENST00000531502 TLE2Q04725 743 aa17.32■□□□□ 0.36
CTSB-221ENST00000531502 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.32■□□□□ 0.36
CTSB-221ENST00000531502 BCL11AQ9H165 835 aa17.32■□□□□ 0.36
CTSB-221ENST00000531502 SLC4A4Q9Y6R1 1079 aa17.32■□□□□ 0.36
CTSB-221ENST00000531502 RARBP10826 455 aa17.31■□□□□ 0.36
CTSB-221ENST00000531502 CDX2Q99626 313 aaPredicted RBP17.31■□□□□ 0.36
CTSB-221ENST00000531502 SEMA6BQ9H3T3 888 aa17.31■□□□□ 0.36
CTSB-221ENST00000531502 XPNPEP3Q9NQH7 507 aa17.31■□□□□ 0.36
CTSB-221ENST00000531502 PGK1P00558 417 aa17.3■□□□□ 0.36
CTSB-221ENST00000531502 SMAD3P84022 425 aaKnown RBP17.3■□□□□ 0.36
CTSB-221ENST00000531502 FAM83BQ5T0W9 1011 aa17.3■□□□□ 0.36
CTSB-221ENST00000531502 AMOTL1Q8IY63 956 aa17.3■□□□□ 0.36
CTSB-221ENST00000531502 TTYH1Q9H313 450 aaPredicted RBP17.3■□□□□ 0.36
CTSB-221ENST00000531502 GOPCQ9HD26 462 aa17.3■□□□□ 0.36
CTSB-221ENST00000531502 EYSQ5T1H1 3165 aa17.29■□□□□ 0.36
CTSB-221ENST00000531502 ADAMTS4O75173 837 aa17.29■□□□□ 0.36
CTSB-221ENST00000531502 EPHB4P54760 987 aa17.29■□□□□ 0.36
CTSB-221ENST00000531502 KCTD2Q14681 263 aa17.29■□□□□ 0.36
CTSB-221ENST00000531502 LENG1Q96BZ8 264 aaPredicted RBP17.29■□□□□ 0.36
CTSB-221ENST00000531502 STRBPQ96SI9 672 aaKnown RBP17.29■□□□□ 0.36
CTSB-221ENST00000531502 TACC3Q9Y6A5 838 aa17.29■□□□□ 0.36
CTSB-221ENST00000531502 A0A1W2PQ45 241 aaPredicted RBP17.28■□□□□ 0.36
CTSB-221ENST00000531502 A0A1W2PQY0 241 aa17.28■□□□□ 0.36
CTSB-221ENST00000531502 KIAA0355O15063 1070 aa17.28■□□□□ 0.36
CTSB-221ENST00000531502 CLTBP09497 229 aa17.28■□□□□ 0.36
CTSB-221ENST00000531502 AKR1A1P14550 325 aa17.28■□□□□ 0.36
CTSB-221ENST00000531502 RASA1P20936 1047 aa17.28■□□□□ 0.36
CTSB-221ENST00000531502 COPB2P35606 906 aa17.28■□□□□ 0.36
CTSB-221ENST00000531502 SBK1Q52WX2 424 aa17.28■□□□□ 0.36
CTSB-221ENST00000531502 RNF180Q86T96 592 aa17.28■□□□□ 0.36
CTSB-221ENST00000531502 DDRGK1Q96HY6 314 aa17.28■□□□□ 0.36
CTSB-221ENST00000531502 NUP88Q99567 741 aaPredicted RBP17.28■□□□□ 0.36
CTSB-221ENST00000531502 ARPP21Q9UBL0 812 aaPredicted RBP17.28■□□□□ 0.36
CTSB-221ENST00000531502 RIPK3Q9Y572 518 aa17.28■□□□□ 0.36
CTSB-221ENST00000531502 DNAJC25-GNG10A0A024R161 153 aa17.27■□□□□ 0.36
CTSB-221ENST00000531502 GSG1L2A8MUP6 293 aa17.27■□□□□ 0.36
CTSB-221ENST00000531502 SNAI1O95863 264 aaPredicted RBP17.27■□□□□ 0.36
CTSB-221ENST00000531502 CCSAPQ6IQ19 270 aaPredicted RBP17.27■□□□□ 0.36
CTSB-221ENST00000531502 ZSCAN25Q6NSZ9 544 aa17.27■□□□□ 0.36
CTSB-221ENST00000531502 MSL3Q8N5Y2 521 aaKnown RBP17.27■□□□□ 0.36
CTSB-221ENST00000531502 KLHDC9Q8NEP7 349 aa17.27■□□□□ 0.36
CTSB-221ENST00000531502 SLF1Q9BQI6 1058 aa17.27■□□□□ 0.36
CTSB-221ENST00000531502 TSEN34Q9BSV6 310 aaKnown RBP17.27■□□□□ 0.36
CTSB-221ENST00000531502 NYAP2Q9P242 653 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms