RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 TRPV1Q8NER1 839 aa18.89■□□□□ 0.61
CPSF1-205ENST00000531042 MKNK2Q9HBH9 465 aa18.89■□□□□ 0.61
CPSF1-205ENST00000531042 EPB41L4AQ9HCS5 686 aaPredicted RBP18.89■□□□□ 0.61
CPSF1-205ENST00000531042 ZMYND8Q9ULU4 1186 aaPredicted RBP18.89■□□□□ 0.61
CPSF1-205ENST00000531042 ERC2O15083 957 aa18.88■□□□□ 0.61
CPSF1-205ENST00000531042 MSCO60682 206 aa18.88■□□□□ 0.61
CPSF1-205ENST00000531042 CYBAP13498 195 aa18.88■□□□□ 0.61
CPSF1-205ENST00000531042 LRRFIP1Q32MZ4 808 aaKnown RBP18.88■□□□□ 0.61
CPSF1-205ENST00000531042 ABRAQ8N0Z2 381 aa18.88■□□□□ 0.61
CPSF1-205ENST00000531042 PI4K2BQ8TCG2 481 aa18.88■□□□□ 0.61
CPSF1-205ENST00000531042 GDF15Q99988 308 aa18.88■□□□□ 0.61
CPSF1-205ENST00000531042 FBXO28Q9NVF7 368 aa18.88■□□□□ 0.61
CPSF1-205ENST00000531042 ZNFX1Q9P2E3 1918 aaKnown RBP18.88■□□□□ 0.61
CPSF1-205ENST00000531042 PATL2C9JE40 543 aaKnown RBP18.87■□□□□ 0.61
CPSF1-205ENST00000531042 RAD21O60216 631 aa18.87■□□□□ 0.61
CPSF1-205ENST00000531042 SLC25A27O95847 323 aa18.87■□□□□ 0.61
CPSF1-205ENST00000531042 BMP8BP34820 402 aa18.87■□□□□ 0.61
CPSF1-205ENST00000531042 TDO2P48775 406 aa18.87■□□□□ 0.61
CPSF1-205ENST00000531042 RRP1P56182 461 aaKnown RBP18.87■□□□□ 0.61
CPSF1-205ENST00000531042 FAM83BQ5T0W9 1011 aa18.87■□□□□ 0.61
CPSF1-205ENST00000531042 OTUD7AQ8TE49 926 aaPredicted RBP18.87■□□□□ 0.61
CPSF1-205ENST00000531042 SLC5A4Q9NY91 659 aa18.87■□□□□ 0.61
CPSF1-205ENST00000531042 NYAP2Q9P242 653 aa18.87■□□□□ 0.61
CPSF1-205ENST00000531042 PPP1R9AQ9ULJ8 1098 aa18.87■□□□□ 0.61
CPSF1-205ENST00000531042 VWA5AO00534 786 aa18.86■□□□□ 0.61
CPSF1-205ENST00000531042 APPP05067 770 aa18.86■□□□□ 0.61
CPSF1-205ENST00000531042 FCER1AP12319 257 aa18.86■□□□□ 0.61
CPSF1-205ENST00000531042 SYN1P17600 705 aa18.86■□□□□ 0.61
CPSF1-205ENST00000531042 LRRC26Q2I0M4 334 aa18.86■□□□□ 0.61
CPSF1-205ENST00000531042 SEC62Q99442 399 aaKnown RBP18.86■□□□□ 0.61
CPSF1-205ENST00000531042 IGKV6D-41A0A0C4DH26 115 aa18.85■□□□□ 0.61
CPSF1-205ENST00000531042 STAT3P40763 770 aa18.85■□□□□ 0.61
CPSF1-205ENST00000531042 RIOX2Q8IUF8 465 aa18.85■□□□□ 0.61
CPSF1-205ENST00000531042 IFNL3Q8IZI9 196 aa18.85■□□□□ 0.61
CPSF1-205ENST00000531042 ZNF444Q8N0Y2 327 aaPredicted RBP18.85■□□□□ 0.61
CPSF1-205ENST00000531042 REPS2Q8NFH8 660 aa18.85■□□□□ 0.61
CPSF1-205ENST00000531042 ZNF287Q9HBT7 754 aa18.85■□□□□ 0.61
CPSF1-205ENST00000531042 ZNF214Q9UL59 606 aaPredicted RBP18.85■□□□□ 0.61
CPSF1-205ENST00000531042 MYH4Q9Y623 1939 aa18.84■□□□□ 0.61
CPSF1-205ENST00000531042 F5H6K3 240 aa18.84■□□□□ 0.61
CPSF1-205ENST00000531042 MX1P20591 662 aa18.84■□□□□ 0.61
CPSF1-205ENST00000531042 KLRC3Q07444 240 aa18.84■□□□□ 0.61
CPSF1-205ENST00000531042 MAML3Q96JK9 1138 aa18.84■□□□□ 0.61
CPSF1-205ENST00000531042 NUP88Q99567 741 aaPredicted RBP18.84■□□□□ 0.61
CPSF1-205ENST00000531042 FSD1Q9BTV5 496 aa18.84■□□□□ 0.61
CPSF1-205ENST00000531042 SENP6Q9GZR1 1112 aaPredicted RBP18.84■□□□□ 0.61
CPSF1-205ENST00000531042 CLIP2Q9UDT6 1046 aa18.84■□□□□ 0.61
CPSF1-205ENST00000531042 SALL3Q9BXA9 1300 aa18.83■□□□□ 0.61
CPSF1-205ENST00000531042 DNM1LO00429 736 aa18.83■□□□□ 0.6
CPSF1-205ENST00000531042 SEPT4O43236 478 aa18.83■□□□□ 0.6
CPSF1-205ENST00000531042 PRDM1O75626 825 aa18.83■□□□□ 0.6
CPSF1-205ENST00000531042 MAGEA10P43363 369 aaPredicted RBP18.83■□□□□ 0.6
CPSF1-205ENST00000531042 ZMYM1Q5SVZ6 1142 aa18.83■□□□□ 0.6
CPSF1-205ENST00000531042 PRAMEF19Q5SWL8 479 aa18.83■□□□□ 0.6
CPSF1-205ENST00000531042 MMP19Q99542 508 aa18.83■□□□□ 0.6
CPSF1-205ENST00000531042 SLF1Q9BQI6 1058 aa18.83■□□□□ 0.6
CPSF1-205ENST00000531042 NACAP1Q9BZK3 213 aa18.83■□□□□ 0.6
CPSF1-205ENST00000531042 PLXNA1Q9UIW2 1896 aa18.82■□□□□ 0.6
CPSF1-205ENST00000531042 SOX1O00570 391 aaPredicted RBP18.82■□□□□ 0.6
CPSF1-205ENST00000531042 NDUFB10O96000 172 aa18.82■□□□□ 0.6
CPSF1-205ENST00000531042 COPB2P35606 906 aa18.82■□□□□ 0.6
CPSF1-205ENST00000531042 MKL1Q969V6 931 aa18.82■□□□□ 0.6
CPSF1-205ENST00000531042 CRBNQ96SW2 442 aa18.82■□□□□ 0.6
CPSF1-205ENST00000531042 MTMR4Q9NYA4 1195 aa18.82■□□□□ 0.6
CPSF1-205ENST00000531042 LAMA3Q16787 3333 aa18.82■□□□□ 0.6
CPSF1-205ENST00000531042 PGK2P07205 417 aa18.81■□□□□ 0.6
CPSF1-205ENST00000531042 KCTD2Q14681 263 aa18.81■□□□□ 0.6
CPSF1-205ENST00000531042 GJC2Q5T442 439 aaPredicted RBP18.81■□□□□ 0.6
CPSF1-205ENST00000531042 ANKRD45Q5TZF3 282 aa18.81■□□□□ 0.6
CPSF1-205ENST00000531042 ANO1Q5XXA6 986 aa18.81■□□□□ 0.6
CPSF1-205ENST00000531042 PRPF38AQ8NAV1 312 aaKnown RBP18.81■□□□□ 0.6
CPSF1-205ENST00000531042 ARRDC4Q8NCT1 418 aa18.81■□□□□ 0.6
CPSF1-205ENST00000531042 CEP95Q96GE4 821 aa18.81■□□□□ 0.6
CPSF1-205ENST00000531042 DIS3Q9Y2L1 958 aaKnown RBP18.81■□□□□ 0.6
CPSF1-205ENST00000531042 PDE4BQ07343 736 aa18.8■□□□□ 0.6
CPSF1-205ENST00000531042 PPARAQ07869 468 aa18.8■□□□□ 0.6
CPSF1-205ENST00000531042 ZNF792Q3KQV3 632 aa18.8■□□□□ 0.6
CPSF1-205ENST00000531042 TEX13BQ9BXU2 312 aa18.8■□□□□ 0.6
CPSF1-205ENST00000531042 NAPBQ9H115 298 aa18.8■□□□□ 0.6
CPSF1-205ENST00000531042 ZBTB47Q9UFB7 747 aaPredicted RBP18.8■□□□□ 0.6
CPSF1-205ENST00000531042 SYNPO2Q9UMS6 1093 aa18.8■□□□□ 0.6
CPSF1-205ENST00000531042 PLIN4Q96Q06 1357 aa18.8■□□□□ 0.6
CPSF1-205ENST00000531042 TTLL1O95922 423 aa18.79■□□□□ 0.6
CPSF1-205ENST00000531042 SLC3A2P08195 630 aaKnown RBP18.79■□□□□ 0.6
CPSF1-205ENST00000531042 ATN1P54259 1190 aaPredicted RBP18.79■□□□□ 0.6
CPSF1-205ENST00000531042 SNRNP48Q6IEG0 339 aaKnown RBP18.79■□□□□ 0.6
CPSF1-205ENST00000531042 GMCL1P1Q8NEA9 526 aa18.79■□□□□ 0.6
CPSF1-205ENST00000531042 NEDD1Q8NHV4 660 aa18.79■□□□□ 0.6
CPSF1-205ENST00000531042 LRCH3Q96II8 777 aa18.79■□□□□ 0.6
CPSF1-205ENST00000531042 TINF2Q9BSI4 451 aa18.79■□□□□ 0.6
CPSF1-205ENST00000531042 NRBP1Q9UHY1 535 aa18.79■□□□□ 0.6
CPSF1-205ENST00000531042 KBTBD13C9JR72 458 aa18.78■□□□□ 0.6
CPSF1-205ENST00000531042 ATP2A1O14983 1001 aa18.78■□□□□ 0.6
CPSF1-205ENST00000531042 FOXP2O15409 715 aa18.78■□□□□ 0.6
CPSF1-205ENST00000531042 TSPY3P0CV98 308 aa18.78■□□□□ 0.6
CPSF1-205ENST00000531042 TSPY8P0CW00 308 aa18.78■□□□□ 0.6
CPSF1-205ENST00000531042 HDAC1Q13547 482 aaPredicted RBP18.78■□□□□ 0.6
CPSF1-205ENST00000531042 FAM47AQ5JRC9 791 aa18.78■□□□□ 0.6
CPSF1-205ENST00000531042 CCDC129Q6ZRS4 1044 aa18.78■□□□□ 0.6
CPSF1-205ENST00000531042 TDHQ8IZJ6 230 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms