RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 ALDH8A1Q9H2A2 487 aaPredicted RBP18.82■□□□□ 0.6
BRK1-201ENST00000530758 LY9Q9HBG7 655 aa18.82■□□□□ 0.6
BRK1-201ENST00000530758 PLA2G6O60733 806 aa18.81■□□□□ 0.6
BRK1-201ENST00000530758 CASTP20810 708 aaKnown RBP18.81■□□□□ 0.6
BRK1-201ENST00000530758 TMEM67Q5HYA8 995 aa18.81■□□□□ 0.6
BRK1-201ENST00000530758 PNMA1Q8ND90 353 aa18.81■□□□□ 0.6
BRK1-201ENST00000530758 KAT14Q9H8E8 782 aa18.81■□□□□ 0.6
BRK1-201ENST00000530758 OSBPP22059 807 aa18.8■□□□□ 0.6
BRK1-201ENST00000530758 LBX2Q6XYB7 198 aa18.8■□□□□ 0.6
BRK1-201ENST00000530758 SPICE1Q8N0Z3 855 aa18.8■□□□□ 0.6
BRK1-201ENST00000530758 DCAF4Q8WV16 495 aa18.8■□□□□ 0.6
BRK1-201ENST00000530758 MAP3K14Q99558 947 aa18.8■□□□□ 0.6
BRK1-201ENST00000530758 KIF2CQ99661 725 aa18.8■□□□□ 0.6
BRK1-201ENST00000530758 RPAP3Q9H6T3 665 aaPredicted RBP18.8■□□□□ 0.6
BRK1-201ENST00000530758 UPF2Q9HAU5 1272 aaKnown RBP18.8■□□□□ 0.6
BRK1-201ENST00000530758 SENP2Q9HC62 589 aa18.8■□□□□ 0.6
BRK1-201ENST00000530758 PNMA3Q9UL41 463 aa18.8■□□□□ 0.6
BRK1-201ENST00000530758 CYP46A1Q9Y6A2 500 aa18.8■□□□□ 0.6
BRK1-201ENST00000530758 MYPNQ86TC9 1320 aa18.79■□□□□ 0.6
BRK1-201ENST00000530758 PDHBP11177 359 aa18.79■□□□□ 0.6
BRK1-201ENST00000530758 BMP3P12645 472 aa18.79■□□□□ 0.6
BRK1-201ENST00000530758 EVCP57679 992 aa18.79■□□□□ 0.6
BRK1-201ENST00000530758 TROAPQ12815 778 aa18.79■□□□□ 0.6
BRK1-201ENST00000530758 COG2Q14746 738 aa18.79■□□□□ 0.6
BRK1-201ENST00000530758 NOM1Q5C9Z4 860 aaKnown RBP18.79■□□□□ 0.6
BRK1-201ENST00000530758 IL27Q8NEV9 243 aa18.79■□□□□ 0.6
BRK1-201ENST00000530758 ASCC2Q9H1I8 757 aaPredicted RBP18.79■□□□□ 0.6
BRK1-201ENST00000530758 R3HDMLQ9H3Y0 253 aa18.79■□□□□ 0.6
BRK1-201ENST00000530758 GPHNQ9NQX3 736 aaPredicted RBP18.79■□□□□ 0.6
BRK1-201ENST00000530758 HOXC10Q9NYD6 342 aa18.79■□□□□ 0.6
BRK1-201ENST00000530758 ADAMTS5Q9UNA0 930 aa18.79■□□□□ 0.6
BRK1-201ENST00000530758 ADGRA2Q96PE1 1338 aa18.78■□□□□ 0.6
BRK1-201ENST00000530758 TLR2O60603 784 aa18.78■□□□□ 0.6
BRK1-201ENST00000530758 CPA1P15085 419 aa18.78■□□□□ 0.6
BRK1-201ENST00000530758 SLC1A4P43007 532 aa18.78■□□□□ 0.6
BRK1-201ENST00000530758 TAF1CQ15572 869 aaPredicted RBP18.78■□□□□ 0.6
BRK1-201ENST00000530758 FAM83BQ5T0W9 1011 aa18.78■□□□□ 0.6
BRK1-201ENST00000530758 BTNL9Q6UXG8 535 aa18.78■□□□□ 0.6
BRK1-201ENST00000530758 TBC1D32Q96NH3 1257 aa18.78■□□□□ 0.6
BRK1-201ENST00000530758 PARK7Q99497 189 aaKnown RBP18.78■□□□□ 0.6
BRK1-201ENST00000530758 P2RX7Q99572 595 aaKnown RBP18.78■□□□□ 0.6
BRK1-201ENST00000530758 ZFYVE28Q9HCC9 887 aa18.78■□□□□ 0.6
BRK1-201ENST00000530758 TBC1D8O95759 1140 aa18.77■□□□□ 0.6
BRK1-201ENST00000530758 DSG3P32926 999 aa18.77■□□□□ 0.6
BRK1-201ENST00000530758 Q6ZUG5 572 aa18.77■□□□□ 0.6
BRK1-201ENST00000530758 GTF3C2Q8WUA4 911 aaPredicted RBP18.77■□□□□ 0.6
BRK1-201ENST00000530758 ABHD8Q96I13 439 aa18.77■□□□□ 0.6
BRK1-201ENST00000530758 TCEANC2Q96MN5 208 aa18.77■□□□□ 0.6
BRK1-201ENST00000530758 LRRC2Q9BYS8 371 aa18.77■□□□□ 0.6
BRK1-201ENST00000530758 FEM1BQ9UK73 627 aa18.77■□□□□ 0.6
BRK1-201ENST00000530758 DDAH1O94760 285 aa18.76■□□□□ 0.59
BRK1-201ENST00000530758 CYP2C8P10632 490 aa18.76■□□□□ 0.59
BRK1-201ENST00000530758 GCLCP48506 637 aaPredicted RBP18.76■□□□□ 0.59
BRK1-201ENST00000530758 RCAN1P53805 252 aa18.76■□□□□ 0.59
BRK1-201ENST00000530758 HERVK_113P62684 666 aa18.76■□□□□ 0.59
BRK1-201ENST00000530758 ZNF543Q08ER8 600 aa18.76■□□□□ 0.59
BRK1-201ENST00000530758 CRHR2Q13324 411 aa18.76■□□□□ 0.59
BRK1-201ENST00000530758 GPATCH4Q5T3I0 446 aaKnown RBP18.76■□□□□ 0.59
BRK1-201ENST00000530758 POTEEQ6S8J3 1075 aa18.76■□□□□ 0.59
BRK1-201ENST00000530758 C17orf99Q6UX52 265 aa18.76■□□□□ 0.59
BRK1-201ENST00000530758 CATIPQ7Z7H3 387 aa18.76■□□□□ 0.59
BRK1-201ENST00000530758 PRPF38AQ8NAV1 312 aaKnown RBP18.76■□□□□ 0.59
BRK1-201ENST00000530758 NUP88Q99567 741 aaPredicted RBP18.76■□□□□ 0.59
BRK1-201ENST00000530758 MCOLN1Q9GZU1 580 aa18.76■□□□□ 0.59
BRK1-201ENST00000530758 A0A0G2JMZ2 1700 aa18.76■□□□□ 0.59
BRK1-201ENST00000530758 PALM3A6NDB9 673 aaPredicted RBP18.75■□□□□ 0.59
BRK1-201ENST00000530758 CCDC69A6NI79 296 aa18.75■□□□□ 0.59
BRK1-201ENST00000530758 IRX3P78415 501 aaPredicted RBP18.75■□□□□ 0.59
BRK1-201ENST00000530758 FAM160B2Q86V87 743 aa18.75■□□□□ 0.59
BRK1-201ENST00000530758 ZNF654Q8IZM8 581 aa18.75■□□□□ 0.59
BRK1-201ENST00000530758 CHURC1Q8WUH1 139 aa18.75■□□□□ 0.59
BRK1-201ENST00000530758 UPF3BQ9BZI7 483 aaKnown RBP18.75■□□□□ 0.59
BRK1-201ENST00000530758 TANGO6Q9C0B7 1094 aa18.75■□□□□ 0.59
BRK1-201ENST00000530758 PPP1R9AQ9ULJ8 1098 aa18.75■□□□□ 0.59
BRK1-201ENST00000530758 SPDYE16A6NNV3 312 aaPredicted RBP18.74■□□□□ 0.59
BRK1-201ENST00000530758 TMEM232C9JQI7 657 aa18.74■□□□□ 0.59
BRK1-201ENST00000530758 RAD21O60216 631 aa18.74■□□□□ 0.59
BRK1-201ENST00000530758 FLOT1O75955 427 aa18.74■□□□□ 0.59
BRK1-201ENST00000530758 CALM1P0DP23 149 aa18.74■□□□□ 0.59
BRK1-201ENST00000530758 CALM2P0DP24 149 aa18.74■□□□□ 0.59
BRK1-201ENST00000530758 CALM3P0DP25 149 aa18.74■□□□□ 0.59
BRK1-201ENST00000530758 FDX1P10109 184 aa18.74■□□□□ 0.59
BRK1-201ENST00000530758 BCRP11274 1271 aa18.74■□□□□ 0.59
BRK1-201ENST00000530758 STAT2P52630 851 aa18.74■□□□□ 0.59
BRK1-201ENST00000530758 TOB2Q14106 344 aaPredicted RBP18.74■□□□□ 0.59
BRK1-201ENST00000530758 GRM4Q14833 912 aa18.74■□□□□ 0.59
BRK1-201ENST00000530758 ASPRV1Q53RT3 343 aa18.74■□□□□ 0.59
BRK1-201ENST00000530758 KCTD1Q719H9 257 aa18.74■□□□□ 0.59
BRK1-201ENST00000530758 SLF1Q9BQI6 1058 aa18.74■□□□□ 0.59
BRK1-201ENST00000530758 PDRG1Q9NUG6 133 aa18.74■□□□□ 0.59
BRK1-201ENST00000530758 RBPJLQ9UBG7 517 aa18.74■□□□□ 0.59
BRK1-201ENST00000530758 MORF4L1Q9UBU8 362 aa18.74■□□□□ 0.59
BRK1-201ENST00000530758 MAD2L2Q9UI95 211 aa18.74■□□□□ 0.59
BRK1-201ENST00000530758 BRPF3Q9ULD4 1205 aa18.74■□□□□ 0.59
BRK1-201ENST00000530758 SLC12A7Q9Y666 1083 aa18.74■□□□□ 0.59
BRK1-201ENST00000530758 COL11A1P12107 1806 aaPredicted RBP18.74■□□□□ 0.59
BRK1-201ENST00000530758 PARP1P09874 1014 aaKnown RBP18.73■□□□□ 0.59
BRK1-201ENST00000530758 SMARCA1P28370 1054 aa18.73■□□□□ 0.59
BRK1-201ENST00000530758 PPP2R5BQ15173 497 aa18.73■□□□□ 0.59
BRK1-201ENST00000530758 APOA5Q6Q788 366 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms