RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 SYNE3Q6ZMZ3 975 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 CCDC129Q6ZRS4 1044 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 ZNF589Q86UQ0 364 aaPredicted RBP5.63□□□□□ -1.51
SSBP3-213ENST00000530618 TMTC2Q8N394 836 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 NCOA7Q8NI08 942 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 NKX2-3Q8TAU0 364 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 MAP4K1Q92918 833 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 LRCH3Q96II8 777 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 PAWRQ96IZ0 340 aaKnown RBP5.63□□□□□ -1.51
SSBP3-213ENST00000530618 C12orf42Q96LP6 360 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 DEFB118Q96PH6 123 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 P2RX7Q99572 595 aaKnown RBP5.63□□□□□ -1.51
SSBP3-213ENST00000530618 C22orf23Q9BZE7 217 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.63□□□□□ -1.51
SSBP3-213ENST00000530618 PORCNQ9H237 461 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 AS3MTQ9HBK9 375 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 EMILIN3Q9NT22 766 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 RBPJLQ9UBG7 517 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 DAXXQ9UER7 740 aaPredicted RBP5.63□□□□□ -1.51
SSBP3-213ENST00000530618 SAP30BPQ9UHR5 308 aaKnown RBP5.63□□□□□ -1.51
SSBP3-213ENST00000530618 OGDHLQ9ULD0 1010 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 ZBTB21Q9ULJ3 1066 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 RBM8AQ9Y5S9 174 aaKnown RBP5.63□□□□□ -1.51
SSBP3-213ENST00000530618 LCTP09848 1927 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 MYH4Q9Y623 1939 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 NCOR1O75376 2440 aa5.63□□□□□ -1.51
SSBP3-213ENST00000530618 LRRC37A2A6NM11 1700 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 TRANK1O15050 2925 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 A0A1W2PPC1 479 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 USP17L5A8MUK1 530 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 GSG1L2A8MUP6 293 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 MPHOSPH10O00566 681 aaKnown RBP5.62□□□□□ -1.51
SSBP3-213ENST00000530618 GDF11O95390 407 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 FGAP02671 866 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 HMGCRP04035 888 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 ASNSP08243 561 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 MCM5P33992 734 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 GCLCP48506 637 aaPredicted RBP5.62□□□□□ -1.51
SSBP3-213ENST00000530618 MCM2P49736 904 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 HERVK_113P62684 666 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 GABPAQ06546 454 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 MTMR2Q13614 643 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 CCL14Q16627 93 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 Q3C1V9 767 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 C8orf34Q49A92 452 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 CERKLQ49MI3 558 aaPredicted RBP5.62□□□□□ -1.51
SSBP3-213ENST00000530618 RRP12Q5JTH9 1297 aaKnown RBP5.62□□□□□ -1.51
SSBP3-213ENST00000530618 MORN1Q5T089 497 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 AKNAD1Q5T1N1 836 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 C12orf60Q5U649 245 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 CTR9Q6PD62 1173 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 BLOC1S2Q6QNY1 142 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 C16orf86Q6ZW13 317 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 SKAP1Q86WV1 359 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 SMCR8Q8TEV9 937 aaPredicted RBP5.62□□□□□ -1.51
SSBP3-213ENST00000530618 STAG1Q8WVM7 1258 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 SEC62Q99442 399 aaKnown RBP5.62□□□□□ -1.51
SSBP3-213ENST00000530618 MTA3Q9BTC8 594 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 BACH2Q9BYV9 841 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 ARHGEF10LQ9HCE6 1279 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 FLRT1Q9NZU1 646 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 ANAPC4Q9UJX5 808 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 PALD1Q9ULE6 856 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 CYP46A1Q9Y6A2 500 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 ROBO3Q96MS0 1386 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 XIRP2A4UGR9 3374 aa5.62□□□□□ -1.51
SSBP3-213ENST00000530618 SMIM22K7EJ46 135 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 SLC27A2O14975 620 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 PRKAB2O43741 272 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 ORC4O43929 436 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 RANBP6O60518 1105 aaKnown RBP5.61□□□□□ -1.51
SSBP3-213ENST00000530618 XRCC5P13010 732 aaKnown RBP5.61□□□□□ -1.51
SSBP3-213ENST00000530618 BMP8BP34820 402 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 SHMT1P34896 483 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 HSPA4P34932 840 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 ANP32AP39687 249 aaKnown RBP5.61□□□□□ -1.51
SSBP3-213ENST00000530618 ERVK-9P63128 1117 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 ERVK-24P63145 666 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 RABEP1Q15276 862 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 ABCB5Q2M3G0 1257 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 KIAA1755Q5JYT7 1200 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 CREB3L3Q68CJ9 461 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 TATDN1Q6P1N9 297 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 CPLX2Q6PUV4 134 aaKnown RBP5.61□□□□□ -1.51
SSBP3-213ENST00000530618 NFXL1Q6ZNB6 911 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 TMEM179Q6ZVK1 233 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 RPTORQ8N122 1335 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 ANKLE1Q8NAG6 615 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 WDR19Q8NEZ3 1342 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 ACER1Q8TDN7 264 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 GBF1Q92538 1859 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 DPF3Q92784 378 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 TMEM87BQ96K49 555 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 NEK1Q96PY6 1258 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 FEZ1Q99689 392 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 HTATIP2Q9BUP3 242 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 USP26Q9BXU7 913 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 LSG1Q9H089 658 aaKnown RBP5.61□□□□□ -1.51
SSBP3-213ENST00000530618 PNMA3Q9UL41 463 aa5.61□□□□□ -1.51
SSBP3-213ENST00000530618 SYNPO2Q9UMS6 1093 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms