RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 SMIM22K7EJ46 135 aa17.98■□□□□ 0.47
CAPN1-219ENST00000530495 EEF2P13639 858 aaKnown RBP17.98■□□□□ 0.47
CAPN1-219ENST00000530495 LRRC41Q15345 812 aa17.98■□□□□ 0.47
CAPN1-219ENST00000530495 UBE3CQ15386 1083 aa17.98■□□□□ 0.47
CAPN1-219ENST00000530495 C1orf53Q5VUE5 145 aa17.98■□□□□ 0.47
CAPN1-219ENST00000530495 C16orf86Q6ZW13 317 aa17.98■□□□□ 0.47
CAPN1-219ENST00000530495 AMOTL1Q8IY63 956 aa17.98■□□□□ 0.47
CAPN1-219ENST00000530495 BCL11AQ9H165 835 aa17.98■□□□□ 0.47
CAPN1-219ENST00000530495 KANSL2Q9H9L4 492 aa17.98■□□□□ 0.47
CAPN1-219ENST00000530495 NRBP1Q9UHY1 535 aa17.98■□□□□ 0.47
CAPN1-219ENST00000530495 ZBED9Q6R2W3 1325 aa17.98■□□□□ 0.47
CAPN1-219ENST00000530495 CYP2D7A0A087X1C5 515 aa17.97■□□□□ 0.47
CAPN1-219ENST00000530495 ADCYAP1R1P41586 468 aa17.97■□□□□ 0.47
CAPN1-219ENST00000530495 DDRGK1Q96HY6 314 aa17.97■□□□□ 0.47
CAPN1-219ENST00000530495 GUCD1Q96NT3 240 aa17.97■□□□□ 0.47
CAPN1-219ENST00000530495 DIS3Q9Y2L1 958 aaKnown RBP17.97■□□□□ 0.47
CAPN1-219ENST00000530495 MYH7P12883 1935 aa17.97■□□□□ 0.47
CAPN1-219ENST00000530495 CHGBP05060 677 aa17.96■□□□□ 0.47
CAPN1-219ENST00000530495 SHHQ15465 462 aa17.96■□□□□ 0.47
CAPN1-219ENST00000530495 TRIM60Q495X7 471 aa17.96■□□□□ 0.47
CAPN1-219ENST00000530495 CTR9Q6PD62 1173 aa17.96■□□□□ 0.47
CAPN1-219ENST00000530495 RIOX2Q8IUF8 465 aa17.96■□□□□ 0.47
CAPN1-219ENST00000530495 MMP19Q99542 508 aa17.96■□□□□ 0.47
CAPN1-219ENST00000530495 COG6Q9Y2V7 657 aa17.96■□□□□ 0.47
CAPN1-219ENST00000530495 PLXNA1Q9UIW2 1896 aa17.95■□□□□ 0.46
CAPN1-219ENST00000530495 VWA5AO00534 786 aa17.95■□□□□ 0.46
CAPN1-219ENST00000530495 MYCNP04198 464 aaPredicted RBP17.95■□□□□ 0.46
CAPN1-219ENST00000530495 FAM47AQ5JRC9 791 aa17.95■□□□□ 0.46
CAPN1-219ENST00000530495 SAMD1Q6SPF0 538 aaPredicted RBP17.95■□□□□ 0.46
CAPN1-219ENST00000530495 BADQ92934 168 aa17.95■□□□□ 0.46
CAPN1-219ENST00000530495 FERMT2Q96AC1 680 aa17.95■□□□□ 0.46
CAPN1-219ENST00000530495 CHMP4BQ9H444 224 aaKnown RBP17.95■□□□□ 0.46
CAPN1-219ENST00000530495 GOPCQ9HD26 462 aa17.95■□□□□ 0.46
CAPN1-219ENST00000530495 FBXO28Q9NVF7 368 aa17.95■□□□□ 0.46
CAPN1-219ENST00000530495 PHF24Q9UPV7 400 aa17.95■□□□□ 0.46
CAPN1-219ENST00000530495 SLC4A4Q9Y6R1 1079 aa17.95■□□□□ 0.46
CAPN1-219ENST00000530495 LAMA2P24043 3122 aaKnown RBP17.95■□□□□ 0.46
CAPN1-219ENST00000530495 PGK2P07205 417 aa17.94■□□□□ 0.46
CAPN1-219ENST00000530495 STAT3P40763 770 aa17.94■□□□□ 0.46
CAPN1-219ENST00000530495 ZNF792Q3KQV3 632 aa17.94■□□□□ 0.46
CAPN1-219ENST00000530495 ZSCAN25Q6NSZ9 544 aa17.94■□□□□ 0.46
CAPN1-219ENST00000530495 TINF2Q9BSI4 451 aa17.94■□□□□ 0.46
CAPN1-219ENST00000530495 PUS7LQ9H0K6 701 aaKnown RBP17.94■□□□□ 0.46
CAPN1-219ENST00000530495 XPNPEP3Q9NQH7 507 aa17.94■□□□□ 0.46
CAPN1-219ENST00000530495 PRDM5Q9NQX1 630 aaPredicted RBP17.94■□□□□ 0.46
CAPN1-219ENST00000530495 PDLIM7Q9NR12 457 aa17.94■□□□□ 0.46
CAPN1-219ENST00000530495 ZNF214Q9UL59 606 aaPredicted RBP17.94■□□□□ 0.46
CAPN1-219ENST00000530495 PPP1R9AQ9ULJ8 1098 aa17.94■□□□□ 0.46
CAPN1-219ENST00000530495 TRIM43BA6NCK2 446 aa17.93■□□□□ 0.46
CAPN1-219ENST00000530495 RARBP10826 455 aa17.93■□□□□ 0.46
CAPN1-219ENST00000530495 KCTD2Q14681 263 aa17.93■□□□□ 0.46
CAPN1-219ENST00000530495 C9orf50Q5SZB4 431 aa17.93■□□□□ 0.46
CAPN1-219ENST00000530495 ZNF697Q5TEC3 545 aa17.93■□□□□ 0.46
CAPN1-219ENST00000530495 SH3RF1Q7Z6J0 888 aa17.93■□□□□ 0.46
CAPN1-219ENST00000530495 REPS2Q8NFH8 660 aa17.93■□□□□ 0.46
CAPN1-219ENST00000530495 TRIM43Q96BQ3 446 aaPredicted RBP17.93■□□□□ 0.46
CAPN1-219ENST00000530495 FAM161BQ96MY7 647 aa17.93■□□□□ 0.46
CAPN1-219ENST00000530495 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.93■□□□□ 0.46
CAPN1-219ENST00000530495 ZNF865P0CJ78 1059 aaPredicted RBP17.92■□□□□ 0.46
CAPN1-219ENST00000530495 COPB2P35606 906 aa17.92■□□□□ 0.46
CAPN1-219ENST00000530495 TLE2Q04725 743 aa17.92■□□□□ 0.46
CAPN1-219ENST00000530495 SBK1Q52WX2 424 aa17.92■□□□□ 0.46
CAPN1-219ENST00000530495 FAM83BQ5T0W9 1011 aa17.92■□□□□ 0.46
CAPN1-219ENST00000530495 RNF180Q86T96 592 aa17.92■□□□□ 0.46
CAPN1-219ENST00000530495 ARPP21Q9UBL0 812 aaPredicted RBP17.92■□□□□ 0.46
CAPN1-219ENST00000530495 TACC3Q9Y6A5 838 aa17.92■□□□□ 0.46
CAPN1-219ENST00000530495 PGK1P00558 417 aa17.91■□□□□ 0.46
CAPN1-219ENST00000530495 TAL1P17542 331 aaPredicted RBP17.91■□□□□ 0.46
CAPN1-219ENST00000530495 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.91■□□□□ 0.46
CAPN1-219ENST00000530495 STRBPQ96SI9 672 aaKnown RBP17.91■□□□□ 0.46
CAPN1-219ENST00000530495 LRRCC1Q9C099 1032 aa17.91■□□□□ 0.46
CAPN1-219ENST00000530495 SEMA6BQ9H3T3 888 aa17.91■□□□□ 0.46
CAPN1-219ENST00000530495 GREB1LQ9C091 1923 aaPredicted RBP17.91■□□□□ 0.46
CAPN1-219ENST00000530495 ROBO3Q96MS0 1386 aa17.91■□□□□ 0.46
CAPN1-219ENST00000530495 RAD21O60216 631 aa17.9■□□□□ 0.46
CAPN1-219ENST00000530495 SMAD3P84022 425 aaKnown RBP17.9■□□□□ 0.46
CAPN1-219ENST00000530495 MSL3Q8N5Y2 521 aaKnown RBP17.9■□□□□ 0.46
CAPN1-219ENST00000530495 CDX2Q99626 313 aaPredicted RBP17.9■□□□□ 0.46
CAPN1-219ENST00000530495 NYAP2Q9P242 653 aa17.9■□□□□ 0.46
CAPN1-219ENST00000530495 GSG1L2A8MUP6 293 aa17.89■□□□□ 0.45
CAPN1-219ENST00000530495 CLTBP09497 229 aa17.89■□□□□ 0.45
CAPN1-219ENST00000530495 AKR1A1P14550 325 aa17.89■□□□□ 0.45
CAPN1-219ENST00000530495 RASA1P20936 1047 aa17.89■□□□□ 0.45
CAPN1-219ENST00000530495 ITGB8P26012 769 aa17.89■□□□□ 0.45
CAPN1-219ENST00000530495 GIMAP6Q6P9H5 292 aa17.89■□□□□ 0.45
CAPN1-219ENST00000530495 SLF1Q9BQI6 1058 aa17.89■□□□□ 0.45
CAPN1-219ENST00000530495 TSEN34Q9BSV6 310 aaKnown RBP17.89■□□□□ 0.45
CAPN1-219ENST00000530495 COL25A1Q9BXS0 654 aaPredicted RBP17.89■□□□□ 0.45
CAPN1-219ENST00000530495 CNPY2Q9Y2B0 182 aa17.89■□□□□ 0.45
CAPN1-219ENST00000530495 DNAJC25-GNG10A0A024R161 153 aa17.88■□□□□ 0.45
CAPN1-219ENST00000530495 A0A1W2PQ45 241 aaPredicted RBP17.88■□□□□ 0.45
CAPN1-219ENST00000530495 A0A1W2PQY0 241 aa17.88■□□□□ 0.45
CAPN1-219ENST00000530495 F5H6K3 240 aa17.88■□□□□ 0.45
CAPN1-219ENST00000530495 KIAA0355O15063 1070 aa17.88■□□□□ 0.45
CAPN1-219ENST00000530495 ADAMTS4O75173 837 aa17.88■□□□□ 0.45
CAPN1-219ENST00000530495 KLRC3Q07444 240 aa17.88■□□□□ 0.45
CAPN1-219ENST00000530495 MAMDC4Q6UXC1 1216 aa17.88■□□□□ 0.45
CAPN1-219ENST00000530495 PRPF38AQ8NAV1 312 aaKnown RBP17.88■□□□□ 0.45
CAPN1-219ENST00000530495 NUP88Q99567 741 aaPredicted RBP17.88■□□□□ 0.45
CAPN1-219ENST00000530495 TEX13BQ9BXU2 312 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms