RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 C20orf194Q5TEA3 1177 aa18.72■□□□□ 0.59
CTSB-215ENST00000528965 GIMAP6Q6P9H5 292 aa18.72■□□□□ 0.59
CTSB-215ENST00000528965 KBTBD3Q8NAB2 608 aa18.72■□□□□ 0.59
CTSB-215ENST00000528965 ZNF287Q9HBT7 754 aa18.72■□□□□ 0.59
CTSB-215ENST00000528965 NRBP1Q9UHY1 535 aa18.72■□□□□ 0.59
CTSB-215ENST00000528965 ROBO3Q96MS0 1386 aa18.71■□□□□ 0.59
CTSB-215ENST00000528965 ZFYP08048 801 aaPredicted RBP18.71■□□□□ 0.59
CTSB-215ENST00000528965 GNAT2P19087 354 aa18.71■□□□□ 0.59
CTSB-215ENST00000528965 ATN1P54259 1190 aaPredicted RBP18.71■□□□□ 0.59
CTSB-215ENST00000528965 TMEM132BQ14DG7 1078 aa18.71■□□□□ 0.59
CTSB-215ENST00000528965 SBK1Q52WX2 424 aa18.71■□□□□ 0.59
CTSB-215ENST00000528965 RIOX2Q8IUF8 465 aa18.71■□□□□ 0.59
CTSB-215ENST00000528965 APPBP2Q92624 585 aa18.71■□□□□ 0.59
CTSB-215ENST00000528965 MAML3Q96JK9 1138 aa18.71■□□□□ 0.59
CTSB-215ENST00000528965 STRBPQ96SI9 672 aaKnown RBP18.71■□□□□ 0.59
CTSB-215ENST00000528965 MMP19Q99542 508 aa18.71■□□□□ 0.59
CTSB-215ENST00000528965 MKNK2Q9HBH9 465 aa18.71■□□□□ 0.59
CTSB-215ENST00000528965 PPP1R9AQ9ULJ8 1098 aa18.71■□□□□ 0.59
CTSB-215ENST00000528965 LAMA3Q16787 3333 aa18.71■□□□□ 0.58
CTSB-215ENST00000528965 VWA5AO00534 786 aa18.7■□□□□ 0.58
CTSB-215ENST00000528965 CHGBP05060 677 aa18.7■□□□□ 0.58
CTSB-215ENST00000528965 RTP1P59025 263 aa18.7■□□□□ 0.58
CTSB-215ENST00000528965 MDM2Q00987 491 aaPredicted RBP18.7■□□□□ 0.58
CTSB-215ENST00000528965 FAM83BQ5T0W9 1011 aa18.7■□□□□ 0.58
CTSB-215ENST00000528965 GJC2Q5T442 439 aaPredicted RBP18.7■□□□□ 0.58
CTSB-215ENST00000528965 ADAMTS5Q9UNA0 930 aa18.7■□□□□ 0.58
CTSB-215ENST00000528965 RNF113AO15541 343 aaKnown RBP18.69■□□□□ 0.58
CTSB-215ENST00000528965 MYCNP04198 464 aaPredicted RBP18.69■□□□□ 0.58
CTSB-215ENST00000528965 STAT3P40763 770 aa18.69■□□□□ 0.58
CTSB-215ENST00000528965 DEFB123Q8N688 67 aa18.69■□□□□ 0.58
CTSB-215ENST00000528965 SLF1Q9BQI6 1058 aa18.69■□□□□ 0.58
CTSB-215ENST00000528965 DCTPP1Q9H773 170 aa18.69■□□□□ 0.58
CTSB-215ENST00000528965 PARP14Q460N5 1801 aa18.69■□□□□ 0.58
CTSB-215ENST00000528965 MINDY4BA8MYZ0 360 aa18.68■□□□□ 0.58
CTSB-215ENST00000528965 SMIM22K7EJ46 135 aa18.68■□□□□ 0.58
CTSB-215ENST00000528965 TDO2P48775 406 aa18.68■□□□□ 0.58
CTSB-215ENST00000528965 FBXO28Q9NVF7 368 aa18.68■□□□□ 0.58
CTSB-215ENST00000528965 NYAP2Q9P242 653 aa18.68■□□□□ 0.58
CTSB-215ENST00000528965 ATP11BQ9Y2G3 1177 aa18.68■□□□□ 0.58
CTSB-215ENST00000528965 DIS3Q9Y2L1 958 aaKnown RBP18.68■□□□□ 0.58
CTSB-215ENST00000528965 CTDP1Q9Y5B0 961 aaPredicted RBP18.68■□□□□ 0.58
CTSB-215ENST00000528965 GSG1L2A8MUP6 293 aa18.67■□□□□ 0.58
CTSB-215ENST00000528965 ERC2O15083 957 aa18.67■□□□□ 0.58
CTSB-215ENST00000528965 GPAA1O43292 621 aa18.67■□□□□ 0.58
CTSB-215ENST00000528965 RARBP10826 455 aa18.67■□□□□ 0.58
CTSB-215ENST00000528965 RASA1P20936 1047 aa18.67■□□□□ 0.58
CTSB-215ENST00000528965 ANO1Q5XXA6 986 aa18.67■□□□□ 0.58
CTSB-215ENST00000528965 TEX13BQ9BXU2 312 aa18.67■□□□□ 0.58
CTSB-215ENST00000528965 ZNF214Q9UL59 606 aaPredicted RBP18.67■□□□□ 0.58
CTSB-215ENST00000528965 GREB1LQ9C091 1923 aaPredicted RBP18.66■□□□□ 0.58
CTSB-215ENST00000528965 APPP05067 770 aa18.66■□□□□ 0.58
CTSB-215ENST00000528965 FAM47AQ5JRC9 791 aa18.66■□□□□ 0.58
CTSB-215ENST00000528965 SLC17A8Q8NDX2 589 aa18.66■□□□□ 0.58
CTSB-215ENST00000528965 OSBP2Q969R2 916 aa18.66■□□□□ 0.58
CTSB-215ENST00000528965 TINF2Q9BSI4 451 aa18.66■□□□□ 0.58
CTSB-215ENST00000528965 NACAP1Q9BZK3 213 aa18.66■□□□□ 0.58
CTSB-215ENST00000528965 SYNPO2Q9UMS6 1093 aa18.66■□□□□ 0.58
CTSB-215ENST00000528965 CNPY2Q9Y2B0 182 aa18.66■□□□□ 0.58
CTSB-215ENST00000528965 TTC41PQ6P2S7 1318 aa18.66■□□□□ 0.58
CTSB-215ENST00000528965 PGK2P07205 417 aa18.65■□□□□ 0.58
CTSB-215ENST00000528965 LRRC41Q15345 812 aa18.65■□□□□ 0.58
CTSB-215ENST00000528965 PRAMEF19Q5SWL8 479 aa18.65■□□□□ 0.58
CTSB-215ENST00000528965 SLC39A5Q6ZMH5 540 aa18.65■□□□□ 0.58
CTSB-215ENST00000528965 RNF180Q86T96 592 aa18.65■□□□□ 0.58
CTSB-215ENST00000528965 ZNF444Q8N0Y2 327 aaPredicted RBP18.65■□□□□ 0.58
CTSB-215ENST00000528965 STK11IPQ8N1F8 1099 aa18.65■□□□□ 0.58
CTSB-215ENST00000528965 MSL3Q8N5Y2 521 aaKnown RBP18.65■□□□□ 0.58
CTSB-215ENST00000528965 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.65■□□□□ 0.58
CTSB-215ENST00000528965 XPNPEP3Q9NQH7 507 aa18.65■□□□□ 0.58
CTSB-215ENST00000528965 PRDM5Q9NQX1 630 aaPredicted RBP18.65■□□□□ 0.58
CTSB-215ENST00000528965 F5H6K3 240 aa18.64■□□□□ 0.57
CTSB-215ENST00000528965 NDUFB10O96000 172 aa18.64■□□□□ 0.57
CTSB-215ENST00000528965 SLC3A2P08195 630 aaKnown RBP18.64■□□□□ 0.57
CTSB-215ENST00000528965 AKR1A1P14550 325 aa18.64■□□□□ 0.57
CTSB-215ENST00000528965 KLRC3Q07444 240 aa18.64■□□□□ 0.57
CTSB-215ENST00000528965 SNX17Q15036 470 aa18.64■□□□□ 0.57
CTSB-215ENST00000528965 ZNF792Q3KQV3 632 aa18.64■□□□□ 0.57
CTSB-215ENST00000528965 TSHZ3Q63HK5 1081 aa18.64■□□□□ 0.57
CTSB-215ENST00000528965 SNRNP48Q6IEG0 339 aaKnown RBP18.64■□□□□ 0.57
CTSB-215ENST00000528965 PRPF38AQ8NAV1 312 aaKnown RBP18.64■□□□□ 0.57
CTSB-215ENST00000528965 REPS2Q8NFH8 660 aa18.64■□□□□ 0.57
CTSB-215ENST00000528965 COL11A1P12107 1806 aaPredicted RBP18.64■□□□□ 0.57
CTSB-215ENST00000528965 ZBED4O75132 1171 aa18.63■□□□□ 0.57
CTSB-215ENST00000528965 ADCYAP1R1P41586 468 aa18.63■□□□□ 0.57
CTSB-215ENST00000528965 PDE4BQ07343 736 aa18.63■□□□□ 0.57
CTSB-215ENST00000528965 TRIM60Q495X7 471 aa18.63■□□□□ 0.57
CTSB-215ENST00000528965 C1orf53Q5VUE5 145 aa18.63■□□□□ 0.57
CTSB-215ENST00000528965 DDX11Q96FC9 970 aa18.63■□□□□ 0.57
CTSB-215ENST00000528965 NUP88Q99567 741 aaPredicted RBP18.63■□□□□ 0.57
CTSB-215ENST00000528965 EPB41L4AQ9HCS5 686 aaPredicted RBP18.63■□□□□ 0.57
CTSB-215ENST00000528965 CLIP2Q9UDT6 1046 aa18.63■□□□□ 0.57
CTSB-215ENST00000528965 PHF24Q9UPV7 400 aa18.63■□□□□ 0.57
CTSB-215ENST00000528965 STXBP5LQ9Y2K9 1186 aa18.63■□□□□ 0.57
CTSB-215ENST00000528965 M0R2C6 588 aa18.62■□□□□ 0.57
CTSB-215ENST00000528965 TTLL1O95922 423 aa18.62■□□□□ 0.57
CTSB-215ENST00000528965 PPP4R3BQ5MIZ7 849 aa18.62■□□□□ 0.57
CTSB-215ENST00000528965 Q7L0L9 218 aa18.62■□□□□ 0.57
CTSB-215ENST00000528965 FSD1Q9BTV5 496 aa18.62■□□□□ 0.57
CTSB-215ENST00000528965 ZBTB47Q9UFB7 747 aaPredicted RBP18.62■□□□□ 0.57
CTSB-215ENST00000528965 FBXO40Q9UH90 709 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms