RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 STX8Q9UNK0 236 aa10.78□□□□□ -0.68
CMTM1-210ENST00000528441 TMX2Q9Y320 296 aa10.78□□□□□ -0.68
CMTM1-210ENST00000528441 PCDHB13Q9Y5F0 798 aa10.78□□□□□ -0.68
CMTM1-210ENST00000528441 HIP1O00291 1037 aa10.77□□□□□ -0.69
CMTM1-210ENST00000528441 CENPBP07199 599 aaPredicted RBP10.77□□□□□ -0.69
CMTM1-210ENST00000528441 RASA1P20936 1047 aa10.77□□□□□ -0.69
CMTM1-210ENST00000528441 TFAP4Q01664 338 aa10.77□□□□□ -0.69
CMTM1-210ENST00000528441 NUCB1Q02818 461 aa10.77□□□□□ -0.69
CMTM1-210ENST00000528441 CTDSPL2Q05D32 466 aa10.77□□□□□ -0.69
CMTM1-210ENST00000528441 Q3C1V9 767 aa10.77□□□□□ -0.69
CMTM1-210ENST00000528441 FAM83BQ5T0W9 1011 aa10.77□□□□□ -0.69
CMTM1-210ENST00000528441 CWC27Q6UX04 472 aaKnown RBP10.77□□□□□ -0.69
CMTM1-210ENST00000528441 DPP9Q86TI2 863 aa10.77□□□□□ -0.69
CMTM1-210ENST00000528441 PXYLP1Q8TE99 480 aa10.77□□□□□ -0.69
CMTM1-210ENST00000528441 DPF3Q92784 378 aa10.77□□□□□ -0.69
CMTM1-210ENST00000528441 ATG4CQ96DT6 458 aa10.77□□□□□ -0.69
CMTM1-210ENST00000528441 FAM227BQ96M60 508 aa10.77□□□□□ -0.69
CMTM1-210ENST00000528441 DEFB118Q96PH6 123 aa10.77□□□□□ -0.69
CMTM1-210ENST00000528441 PORCNQ9H237 461 aa10.77□□□□□ -0.69
CMTM1-210ENST00000528441 HMX1Q9NP08 348 aaPredicted RBP10.77□□□□□ -0.69
CMTM1-210ENST00000528441 MYH4Q9Y623 1939 aa10.77□□□□□ -0.69
CMTM1-210ENST00000528441 KIAA0100Q14667 2235 aaKnown RBP10.77□□□□□ -0.69
CMTM1-210ENST00000528441 DOCK3Q8IZD9 2030 aa10.77□□□□□ -0.69
CMTM1-210ENST00000528441 RBBP6Q7Z6E9 1792 aaKnown RBP10.76□□□□□ -0.69
CMTM1-210ENST00000528441 A0A0D9SFI3 127 aa10.76□□□□□ -0.69
CMTM1-210ENST00000528441 TTLL1O95922 423 aa10.76□□□□□ -0.69
CMTM1-210ENST00000528441 CNGA1P29973 690 aa10.76□□□□□ -0.69
CMTM1-210ENST00000528441 HAND2P61296 217 aa10.76□□□□□ -0.69
CMTM1-210ENST00000528441 PPP4R3BQ5MIZ7 849 aa10.76□□□□□ -0.69
CMTM1-210ENST00000528441 MFSD14CQ5VZR4 134 aa10.76□□□□□ -0.69
CMTM1-210ENST00000528441 TRMT44Q8IYL2 757 aaKnown RBP10.76□□□□□ -0.69
CMTM1-210ENST00000528441 MB21D1Q8N884 522 aa10.76□□□□□ -0.69
CMTM1-210ENST00000528441 U2AF1L4Q8WU68 220 aaKnown RBP10.76□□□□□ -0.69
CMTM1-210ENST00000528441 KIFC2Q96AC6 838 aa10.76□□□□□ -0.69
CMTM1-210ENST00000528441 APBA2Q99767 749 aa10.76□□□□□ -0.69
CMTM1-210ENST00000528441 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.76□□□□□ -0.69
CMTM1-210ENST00000528441 SLC5A4Q9NY91 659 aa10.76□□□□□ -0.69
CMTM1-210ENST00000528441 CIZ1Q9ULV3 898 aaPredicted RBP10.76□□□□□ -0.69
CMTM1-210ENST00000528441 CCDC171Q6TFL3 1326 aa10.76□□□□□ -0.69
CMTM1-210ENST00000528441 SALL3Q9BXA9 1300 aa10.76□□□□□ -0.69
CMTM1-210ENST00000528441 ROBO3Q96MS0 1386 aa10.76□□□□□ -0.69
CMTM1-210ENST00000528441 FARP2O94887 1054 aaPredicted RBP10.75□□□□□ -0.69
CMTM1-210ENST00000528441 GJB1P08034 283 aa10.75□□□□□ -0.69
CMTM1-210ENST00000528441 SDSP20132 328 aa10.75□□□□□ -0.69
CMTM1-210ENST00000528441 MAP2K5Q13163 448 aa10.75□□□□□ -0.69
CMTM1-210ENST00000528441 CCDC96Q2M329 555 aa10.75□□□□□ -0.69
CMTM1-210ENST00000528441 VPS53Q5VIR6 699 aa10.75□□□□□ -0.69
CMTM1-210ENST00000528441 PLEKHM2Q8IWE5 1019 aa10.75□□□□□ -0.69
CMTM1-210ENST00000528441 CPXCR1Q8N123 301 aa10.75□□□□□ -0.69
CMTM1-210ENST00000528441 CEP95Q96GE4 821 aa10.75□□□□□ -0.69
CMTM1-210ENST00000528441 NUP88Q99567 741 aaPredicted RBP10.75□□□□□ -0.69
CMTM1-210ENST00000528441 HTATIP2Q9BUP3 242 aa10.75□□□□□ -0.69
CMTM1-210ENST00000528441 SPATC1LQ9H0A9 340 aa10.75□□□□□ -0.69
CMTM1-210ENST00000528441 BTBD7Q9P203 1132 aa10.75□□□□□ -0.69
CMTM1-210ENST00000528441 PLXNB2O15031 1838 aa10.74□□□□□ -0.69
CMTM1-210ENST00000528441 F5H6K3 240 aa10.74□□□□□ -0.69
CMTM1-210ENST00000528441 ZBED4O75132 1171 aa10.74□□□□□ -0.69
CMTM1-210ENST00000528441 NDUFB10O96000 172 aa10.74□□□□□ -0.69
CMTM1-210ENST00000528441 CHRM1P11229 460 aaPredicted RBP10.74□□□□□ -0.69
CMTM1-210ENST00000528441 ERCC3P19447 782 aa10.74□□□□□ -0.69
CMTM1-210ENST00000528441 PTPREP23469 700 aa10.74□□□□□ -0.69
CMTM1-210ENST00000528441 GJA8P48165 433 aa10.74□□□□□ -0.69
CMTM1-210ENST00000528441 KLRC3Q07444 240 aa10.74□□□□□ -0.69
CMTM1-210ENST00000528441 PRPF38BQ5VTL8 546 aaKnown RBP10.74□□□□□ -0.69
CMTM1-210ENST00000528441 SLFN13Q68D06 897 aa10.74□□□□□ -0.69
CMTM1-210ENST00000528441 LBX2Q6XYB7 198 aa10.74□□□□□ -0.69
CMTM1-210ENST00000528441 TRIB2Q92519 343 aa10.74□□□□□ -0.69
CMTM1-210ENST00000528441 MMP19Q99542 508 aa10.74□□□□□ -0.69
CMTM1-210ENST00000528441 SLF1Q9BQI6 1058 aa10.74□□□□□ -0.69
CMTM1-210ENST00000528441 MOV10L1Q9BXT6 1211 aaKnown RBP10.74□□□□□ -0.69
CMTM1-210ENST00000528441 FBXO28Q9NVF7 368 aa10.74□□□□□ -0.69
CMTM1-210ENST00000528441 NYAP2Q9P242 653 aa10.74□□□□□ -0.69
CMTM1-210ENST00000528441 SLC15A5A6NIM6 579 aa10.73□□□□□ -0.69
CMTM1-210ENST00000528441 ZNF213O14771 459 aa10.73□□□□□ -0.69
CMTM1-210ENST00000528441 CNMDO75829 334 aa10.73□□□□□ -0.69
CMTM1-210ENST00000528441 SGPL1O95470 568 aa10.73□□□□□ -0.69
CMTM1-210ENST00000528441 SLC25A27O95847 323 aa10.73□□□□□ -0.69
CMTM1-210ENST00000528441 NEFLP07196 543 aa10.73□□□□□ -0.69
CMTM1-210ENST00000528441 HSPD1P10809 573 aaKnown RBP10.73□□□□□ -0.69
CMTM1-210ENST00000528441 FCER1AP12319 257 aa10.73□□□□□ -0.69
CMTM1-210ENST00000528441 BMP3P12645 472 aa10.73□□□□□ -0.69
CMTM1-210ENST00000528441 SLC1A4P43007 532 aa10.73□□□□□ -0.69
CMTM1-210ENST00000528441 TRIM32Q13049 653 aa10.73□□□□□ -0.69
CMTM1-210ENST00000528441 KCTD2Q14681 263 aa10.73□□□□□ -0.69
CMTM1-210ENST00000528441 KIAA1755Q5JYT7 1200 aa10.73□□□□□ -0.69
CMTM1-210ENST00000528441 ASTLQ6HA08 431 aaPredicted RBP10.73□□□□□ -0.69
CMTM1-210ENST00000528441 MFSD6Q6ZSS7 791 aa10.73□□□□□ -0.69
CMTM1-210ENST00000528441 ZNF589Q86UQ0 364 aaPredicted RBP10.73□□□□□ -0.69
CMTM1-210ENST00000528441 NEDD1Q8NHV4 660 aa10.73□□□□□ -0.69
CMTM1-210ENST00000528441 RNF41Q9H4P4 317 aaPredicted RBP10.73□□□□□ -0.69
CMTM1-210ENST00000528441 MROH8Q9H579 483 aa10.73□□□□□ -0.69
CMTM1-210ENST00000528441 PPP1R9AQ9ULJ8 1098 aa10.73□□□□□ -0.69
CMTM1-210ENST00000528441 TRPC6Q9Y210 931 aa10.73□□□□□ -0.69
CMTM1-210ENST00000528441 RPTORQ8N122 1335 aa10.73□□□□□ -0.69
CMTM1-210ENST00000528441 ADORA2AP29274 412 aa10.72□□□□□ -0.69
CMTM1-210ENST00000528441 COPB2P35606 906 aa10.72□□□□□ -0.69
CMTM1-210ENST00000528441 STAT3P40763 770 aa10.72□□□□□ -0.69
CMTM1-210ENST00000528441 CCL14Q16627 93 aa10.72□□□□□ -0.69
CMTM1-210ENST00000528441 SNRNP48Q6IEG0 339 aaKnown RBP10.72□□□□□ -0.69
CMTM1-210ENST00000528441 RUFY2Q8WXA3 655 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms