RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 DDX60LQ5H9U9 1706 aaKnown RBP8.85□□□□□ -0.99
SOX6-211ENST00000528429 SPDYE2BA6NHP3 402 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 KLRF2D3W0D1 207 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 SPTLC2O15270 562 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 NR1I2O75469 434 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 SPDYE6P0CI01 402 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 SCG2P13521 617 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 U2AF2P26368 475 aaKnown RBP eCLIP8.85□□□□□ -0.99
SOX6-211ENST00000528429 MRE11P49959 708 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 CIAPIN1Q6FI81 312 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 LRSAM1Q6UWE0 723 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 SH3BP5LQ7L8J4 393 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 HOMER1Q86YM7 354 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 CCAR1Q8IX12 1150 aaKnown RBP8.85□□□□□ -0.99
SOX6-211ENST00000528429 LINC00301Q8NCQ3 95 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 SHISA4Q96DD7 197 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 CSRNP1Q96S65 589 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 DHX36Q9H2U1 1008 aaKnown RBP8.85□□□□□ -0.99
SOX6-211ENST00000528429 DNAJC18Q9H819 358 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 MTMR4Q9NYA4 1195 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 PI4KBQ9UBF8 816 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 MAD2L2Q9UI95 211 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 FRMPD2Q68DX3 1309 aaPredicted RBP8.85□□□□□ -0.99
SOX6-211ENST00000528429 PARP1P09874 1014 aaKnown RBP8.85□□□□□ -0.99
SOX6-211ENST00000528429 PTGER2P43116 358 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 GNAQP50148 359 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 NLRP5P59047 1200 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 RBM26Q5T8P6 1007 aaKnown RBP8.85□□□□□ -0.99
SOX6-211ENST00000528429 CCDC73Q6ZRK6 1079 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 FSIP1Q8NA03 581 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 GMLQ99445 158 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 SGIP1Q9BQI5 828 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 NUP62CLQ9H1M0 184 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 CABP5Q9NP86 173 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 POLR3EQ9NVU0 708 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 PCDHA7Q9UN72 937 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 SCAF8Q9UPN6 1271 aaKnown RBP8.85□□□□□ -0.99
SOX6-211ENST00000528429 CD2APQ9Y5K6 639 aa8.85□□□□□ -0.99
SOX6-211ENST00000528429 SHTN1A0MZ66 631 aa8.84□□□□□ -0.99
SOX6-211ENST00000528429 FAM205CA6NFA0 338 aa8.84□□□□□ -0.99
SOX6-211ENST00000528429 USP17L5A8MUK1 530 aa8.84□□□□□ -0.99
SOX6-211ENST00000528429 GDF11O95390 407 aa8.84□□□□□ -0.99
SOX6-211ENST00000528429 CERKLQ49MI3 558 aaPredicted RBP8.84□□□□□ -0.99
SOX6-211ENST00000528429 HEATR3Q7Z4Q2 680 aa8.84□□□□□ -0.99
SOX6-211ENST00000528429 CKAP2LQ8IYA6 745 aa8.84□□□□□ -0.99
SOX6-211ENST00000528429 KCNG4Q8TDN1 519 aa8.84□□□□□ -0.99
SOX6-211ENST00000528429 UBA5Q9GZZ9 404 aa8.84□□□□□ -0.99
SOX6-211ENST00000528429 BRMS1Q9HCU9 246 aa8.84□□□□□ -0.99
SOX6-211ENST00000528429 GEMIN8Q9NWZ8 242 aaKnown RBP8.84□□□□□ -0.99
SOX6-211ENST00000528429 GJA3Q9Y6H8 435 aa8.84□□□□□ -0.99
SOX6-211ENST00000528429 DLEC1Q9Y238 1755 aa8.84□□□□□ -0.99
SOX6-211ENST00000528429 CYTH3O43739 400 aa8.84□□□□□ -0.99
SOX6-211ENST00000528429 YEATS4O95619 227 aa8.84□□□□□ -0.99
SOX6-211ENST00000528429 TTLL1O95922 423 aa8.84□□□□□ -0.99
SOX6-211ENST00000528429 KRT2P35908 639 aa8.84□□□□□ -0.99
SOX6-211ENST00000528429 MAP2K1Q02750 393 aaPredicted RBP8.84□□□□□ -0.99
SOX6-211ENST00000528429 SLC35G1Q2M3R5 365 aa8.84□□□□□ -0.99
SOX6-211ENST00000528429 NBPF9Q3BBW0 867 aa8.84□□□□□ -0.99
SOX6-211ENST00000528429 RBSNQ9H1K0 784 aa8.84□□□□□ -0.99
SOX6-211ENST00000528429 EHD4Q9H223 541 aa8.84□□□□□ -0.99
SOX6-211ENST00000528429 TNMDQ9H2S6 317 aa8.84□□□□□ -0.99
SOX6-211ENST00000528429 FOXP1Q9H334 677 aaPredicted RBP8.84□□□□□ -0.99
SOX6-211ENST00000528429 TSPY26PQ9H489 355 aa8.84□□□□□ -0.99
SOX6-211ENST00000528429 GOLPH3LQ9H4A5 285 aa8.84□□□□□ -0.99
SOX6-211ENST00000528429 GPCPD1Q9NPB8 672 aa8.84□□□□□ -0.99
SOX6-211ENST00000528429 STK24Q9Y6E0 443 aa8.84□□□□□ -0.99
SOX6-211ENST00000528429 A0A1B0GVL5 298 aa8.83□□□□□ -1
SOX6-211ENST00000528429 NASPP49321 788 aaPredicted RBP8.83□□□□□ -1
SOX6-211ENST00000528429 PFKFB3Q16875 520 aaPredicted RBP8.83□□□□□ -1
SOX6-211ENST00000528429 PHF20Q9BVI0 1012 aa8.83□□□□□ -1
SOX6-211ENST00000528429 VPS33BQ9H267 617 aa8.83□□□□□ -1
SOX6-211ENST00000528429 ZNF70Q9UC06 446 aaPredicted RBP8.83□□□□□ -1
SOX6-211ENST00000528429 PALM3A6NDB9 673 aaPredicted RBP8.83□□□□□ -1
SOX6-211ENST00000528429 ENTPD3O75355 529 aa8.83□□□□□ -1
SOX6-211ENST00000528429 PDHBP11177 359 aa8.83□□□□□ -1
SOX6-211ENST00000528429 SEPT2Q15019 361 aa8.83□□□□□ -1
SOX6-211ENST00000528429 NOM1Q5C9Z4 860 aaKnown RBP8.83□□□□□ -1
SOX6-211ENST00000528429 AGBL3Q8NEM8 1001 aa8.83□□□□□ -1
SOX6-211ENST00000528429 BORCS6Q96GS4 357 aa8.83□□□□□ -1
SOX6-211ENST00000528429 CCDC17Q96LX7 622 aa8.83□□□□□ -1
SOX6-211ENST00000528429 MAP3K14Q99558 947 aa8.83□□□□□ -1
SOX6-211ENST00000528429 DDX19AQ9NUU7 478 aaKnown RBP8.83□□□□□ -1
SOX6-211ENST00000528429 MYO1BO43795 1136 aa8.82□□□□□ -1
SOX6-211ENST00000528429 KINO60870 393 aaKnown RBP8.82□□□□□ -1
SOX6-211ENST00000528429 TOB1P50616 345 aaPredicted RBP8.82□□□□□ -1
SOX6-211ENST00000528429 SLC39A14Q15043 492 aa8.82□□□□□ -1
SOX6-211ENST00000528429 MAP3K11Q16584 847 aa8.82□□□□□ -1
SOX6-211ENST00000528429 EARS2Q5JPH6 523 aaKnown RBP8.82□□□□□ -1
SOX6-211ENST00000528429 FOXP4Q8IVH2 680 aaPredicted RBP8.82□□□□□ -1
SOX6-211ENST00000528429 CDAN1Q8IWY9 1227 aa8.82□□□□□ -1
SOX6-211ENST00000528429 MRPS27Q92552 414 aaKnown RBP8.82□□□□□ -1
SOX6-211ENST00000528429 TMEM39BQ9GZU3 492 aa8.82□□□□□ -1
SOX6-211ENST00000528429 SEC63Q9UGP8 760 aaKnown RBP8.82□□□□□ -1
SOX6-211ENST00000528429 PCDHB6Q9Y5E3 794 aa8.82□□□□□ -1
SOX6-211ENST00000528429 IGKV6D-41A0A0C4DH26 115 aa8.82□□□□□ -1
SOX6-211ENST00000528429 TPM2P07951 284 aa8.82□□□□□ -1
SOX6-211ENST00000528429 ICA1Q05084 483 aa8.82□□□□□ -1
SOX6-211ENST00000528429 TNIP1Q15025 636 aa8.82□□□□□ -1
SOX6-211ENST00000528429 ABCB5Q2M3G0 1257 aa8.82□□□□□ -1
SOX6-211ENST00000528429 RILPL1Q5EBL4 403 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms