RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 ROBO3Q96MS0 1386 aa30.98■■■□□ 2.55
TRIM3-206ENST00000528227 FBXO28Q9NVF7 368 aa30.98■■■□□ 2.55
TRIM3-206ENST00000528227 SLC5A4Q9NY91 659 aa30.98■■■□□ 2.55
TRIM3-206ENST00000528227 RASA1P20936 1047 aa30.97■■■□□ 2.55
TRIM3-206ENST00000528227 SLC25A27O95847 323 aa30.96■■■□□ 2.55
TRIM3-206ENST00000528227 ZFYP08048 801 aaPredicted RBP30.96■■■□□ 2.55
TRIM3-206ENST00000528227 SENP6Q9GZR1 1112 aaPredicted RBP30.96■■■□□ 2.55
TRIM3-206ENST00000528227 MINDY4BA8MYZ0 360 aa30.95■■■□□ 2.55
TRIM3-206ENST00000528227 DNM1LO00429 736 aa30.95■■■□□ 2.55
TRIM3-206ENST00000528227 GPAA1O43292 621 aa30.95■■■□□ 2.55
TRIM3-206ENST00000528227 FCER1AP12319 257 aa30.95■■■□□ 2.55
TRIM3-206ENST00000528227 FAM83BQ5T0W9 1011 aa30.95■■■□□ 2.55
TRIM3-206ENST00000528227 STK11IPQ8N1F8 1099 aa30.95■■■□□ 2.55
TRIM3-206ENST00000528227 LRCH3Q96II8 777 aa30.95■■■□□ 2.55
TRIM3-206ENST00000528227 EPB41L4AQ9HCS5 686 aaPredicted RBP30.95■■■□□ 2.55
TRIM3-206ENST00000528227 PPP1R9AQ9ULJ8 1098 aa30.95■■■□□ 2.55
TRIM3-206ENST00000528227 M0R2C6 588 aa30.94■■■□□ 2.54
TRIM3-206ENST00000528227 VWA5AO00534 786 aa30.94■■■□□ 2.54
TRIM3-206ENST00000528227 RIOX2Q8IUF8 465 aa30.94■■■□□ 2.54
TRIM3-206ENST00000528227 MAML3Q96JK9 1138 aa30.94■■■□□ 2.54
TRIM3-206ENST00000528227 MKNK2Q9HBH9 465 aa30.94■■■□□ 2.54
TRIM3-206ENST00000528227 PCDHB15Q9Y5E8 787 aa30.94■■■□□ 2.54
TRIM3-206ENST00000528227 RAD21O60216 631 aa30.93■■■□□ 2.54
TRIM3-206ENST00000528227 GNAT2P19087 354 aa30.93■■■□□ 2.54
TRIM3-206ENST00000528227 TTC41PQ6P2S7 1318 aa30.93■■■□□ 2.54
TRIM3-206ENST00000528227 ZNFX1Q9P2E3 1918 aaKnown RBP30.92■■■□□ 2.54
TRIM3-206ENST00000528227 SEPT4O43236 478 aa30.92■■■□□ 2.54
TRIM3-206ENST00000528227 REPS2Q8NFH8 660 aa30.92■■■□□ 2.54
TRIM3-206ENST00000528227 NYAP2Q9P242 653 aa30.92■■■□□ 2.54
TRIM3-206ENST00000528227 ZNF214Q9UL59 606 aaPredicted RBP30.92■■■□□ 2.54
TRIM3-206ENST00000528227 STAT3P40763 770 aa30.91■■■□□ 2.54
TRIM3-206ENST00000528227 TDHQ8IZJ6 230 aa30.91■■■□□ 2.54
TRIM3-206ENST00000528227 MMP19Q99542 508 aa30.91■■■□□ 2.54
TRIM3-206ENST00000528227 TDO2P48775 406 aa30.9■■■□□ 2.54
TRIM3-206ENST00000528227 LRRFIP1Q32MZ4 808 aaKnown RBP30.9■■■□□ 2.54
TRIM3-206ENST00000528227 PRAMEF19Q5SWL8 479 aa30.9■■■□□ 2.54
TRIM3-206ENST00000528227 GJC2Q5T442 439 aaPredicted RBP30.9■■■□□ 2.54
TRIM3-206ENST00000528227 ANO1Q5XXA6 986 aa30.9■■■□□ 2.54
TRIM3-206ENST00000528227 ARRDC4Q8NCT1 418 aa30.9■■■□□ 2.54
TRIM3-206ENST00000528227 PI4K2BQ8TCG2 481 aa30.9■■■□□ 2.54
TRIM3-206ENST00000528227 NUP88Q99567 741 aaPredicted RBP30.9■■■□□ 2.54
TRIM3-206ENST00000528227 UBE2OQ9C0C9 1292 aaKnown RBP30.9■■■□□ 2.54
TRIM3-206ENST00000528227 LAMA3Q16787 3333 aa30.9■■■□□ 2.54
TRIM3-206ENST00000528227 IGKV6D-41A0A0C4DH26 115 aa30.89■■■□□ 2.54
TRIM3-206ENST00000528227 ERC2O15083 957 aa30.89■■■□□ 2.54
TRIM3-206ENST00000528227 ATN1P54259 1190 aaPredicted RBP30.89■■■□□ 2.54
TRIM3-206ENST00000528227 OTUD7AQ8TE49 926 aaPredicted RBP30.89■■■□□ 2.54
TRIM3-206ENST00000528227 PATL2C9JE40 543 aaKnown RBP30.88■■■□□ 2.53
TRIM3-206ENST00000528227 F5H6K3 240 aa30.88■■■□□ 2.53
TRIM3-206ENST00000528227 APPP05067 770 aa30.88■■■□□ 2.53
TRIM3-206ENST00000528227 COPB2P35606 906 aa30.88■■■□□ 2.53
TRIM3-206ENST00000528227 KLRC3Q07444 240 aa30.88■■■□□ 2.53
TRIM3-206ENST00000528227 KCTD2Q14681 263 aa30.88■■■□□ 2.53
TRIM3-206ENST00000528227 LRIT3Q3SXY7 679 aa30.88■■■□□ 2.53
TRIM3-206ENST00000528227 IFNL3Q8IZI9 196 aa30.88■■■□□ 2.53
TRIM3-206ENST00000528227 SLF1Q9BQI6 1058 aa30.88■■■□□ 2.53
TRIM3-206ENST00000528227 PLXNA1Q9UIW2 1896 aa30.87■■■□□ 2.53
TRIM3-206ENST00000528227 NDUFB10O96000 172 aa30.87■■■□□ 2.53
TRIM3-206ENST00000528227 PGK2P07205 417 aa30.87■■■□□ 2.53
TRIM3-206ENST00000528227 SEC62Q99442 399 aaKnown RBP30.87■■■□□ 2.53
TRIM3-206ENST00000528227 ZNF287Q9HBT7 754 aa30.87■■■□□ 2.53
TRIM3-206ENST00000528227 MYH4Q9Y623 1939 aa30.86■■■□□ 2.53
TRIM3-206ENST00000528227 PRDM1O75626 825 aa30.86■■■□□ 2.53
TRIM3-206ENST00000528227 MDM2Q00987 491 aaPredicted RBP30.86■■■□□ 2.53
TRIM3-206ENST00000528227 ZNF792Q3KQV3 632 aa30.86■■■□□ 2.53
TRIM3-206ENST00000528227 ZNF444Q8N0Y2 327 aaPredicted RBP30.86■■■□□ 2.53
TRIM3-206ENST00000528227 CLIP2Q9UDT6 1046 aa30.86■■■□□ 2.53
TRIM3-206ENST00000528227 NRBP1Q9UHY1 535 aa30.86■■■□□ 2.53
TRIM3-206ENST00000528227 DIS3Q9Y2L1 958 aaKnown RBP30.86■■■□□ 2.53
TRIM3-206ENST00000528227 KBTBD13C9JR72 458 aa30.85■■■□□ 2.53
TRIM3-206ENST00000528227 RTP1P59025 263 aa30.85■■■□□ 2.53
TRIM3-206ENST00000528227 GPR153Q6NV75 609 aa30.84■■■□□ 2.53
TRIM3-206ENST00000528227 MKL1Q969V6 931 aa30.84■■■□□ 2.53
TRIM3-206ENST00000528227 CEP95Q96GE4 821 aa30.84■■■□□ 2.53
TRIM3-206ENST00000528227 TINF2Q9BSI4 451 aa30.84■■■□□ 2.53
TRIM3-206ENST00000528227 FSD1Q9BTV5 496 aa30.84■■■□□ 2.53
TRIM3-206ENST00000528227 TEX13BQ9BXU2 312 aa30.84■■■□□ 2.53
TRIM3-206ENST00000528227 NACAP1Q9BZK3 213 aa30.84■■■□□ 2.53
TRIM3-206ENST00000528227 DNAH12Q6ZR08 3092 aa30.83■■■□□ 2.53
TRIM3-206ENST00000528227 MX1P20591 662 aa30.83■■■□□ 2.53
TRIM3-206ENST00000528227 FAM47AQ5JRC9 791 aa30.83■■■□□ 2.53
TRIM3-206ENST00000528227 ZMYM1Q5SVZ6 1142 aa30.83■■■□□ 2.53
TRIM3-206ENST00000528227 PRPF38AQ8NAV1 312 aaKnown RBP30.83■■■□□ 2.53
TRIM3-206ENST00000528227 MTMR4Q9NYA4 1195 aa30.83■■■□□ 2.53
TRIM3-206ENST00000528227 RRP1P56182 461 aaKnown RBP30.82■■■□□ 2.52
TRIM3-206ENST00000528227 LRRC41Q15345 812 aa30.82■■■□□ 2.52
TRIM3-206ENST00000528227 SNRNP48Q6IEG0 339 aaKnown RBP30.82■■■□□ 2.52
TRIM3-206ENST00000528227 SLC39A5Q6ZMH5 540 aa30.82■■■□□ 2.52
TRIM3-206ENST00000528227 SYNPO2Q9UMS6 1093 aa30.82■■■□□ 2.52
TRIM3-206ENST00000528227 PLIN4Q96Q06 1357 aa30.81■■■□□ 2.52
TRIM3-206ENST00000528227 MYCNP04198 464 aaPredicted RBP30.81■■■□□ 2.52
TRIM3-206ENST00000528227 RIPK3Q9Y572 518 aa30.81■■■□□ 2.52
TRIM3-206ENST00000528227 SALL3Q9BXA9 1300 aa30.8■■■□□ 2.52
TRIM3-206ENST00000528227 ATP2A1O14983 1001 aa30.8■■■□□ 2.52
TRIM3-206ENST00000528227 TTLL1O95922 423 aa30.8■■■□□ 2.52
TRIM3-206ENST00000528227 GMCL1P1Q8NEA9 526 aa30.8■■■□□ 2.52
TRIM3-206ENST00000528227 NAPBQ9H115 298 aa30.8■■■□□ 2.52
TRIM3-206ENST00000528227 ATP11BQ9Y2G3 1177 aa30.8■■■□□ 2.52
TRIM3-206ENST00000528227 LTBP2Q14767 1821 aa30.8■■■□□ 2.52
TRIM3-206ENST00000528227 TAL1P17542 331 aaPredicted RBP30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms