RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 OLFML2BQ68BL8 750 aa27.53■■■□□ 2
PKP3-206ENST00000528036 PAWRQ96IZ0 340 aaKnown RBP27.53■■■□□ 2
PKP3-206ENST00000528036 IGKV6D-41A0A0C4DH26 115 aa27.52■■■□□ 2
PKP3-206ENST00000528036 F5H6K3 240 aa27.52■■■□□ 2
PKP3-206ENST00000528036 RAD21O60216 631 aa27.52■■■□□ 2
PKP3-206ENST00000528036 EVI5O60447 810 aa27.52■■■□□ 2
PKP3-206ENST00000528036 TTLL1O95922 423 aa27.52■■■□□ 2
PKP3-206ENST00000528036 KLRC3Q07444 240 aa27.52■■■□□ 2
PKP3-206ENST00000528036 CCL14Q16627 93 aa27.52■■■□□ 2
PKP3-206ENST00000528036 HABP4Q5JVS0 413 aaKnown RBP27.52■■■□□ 2
PKP3-206ENST00000528036 NCAPG2Q86XI2 1143 aa27.52■■■□□ 2
PKP3-206ENST00000528036 NEDD1Q8NHV4 660 aa27.52■■■□□ 2
PKP3-206ENST00000528036 MTMR4Q9NYA4 1195 aa27.52■■■□□ 2
PKP3-206ENST00000528036 PLIN4Q96Q06 1357 aa27.51■■□□□ 1.99
PKP3-206ENST00000528036 TSPY3P0CV98 308 aa27.51■■□□□ 1.99
PKP3-206ENST00000528036 TSPY8P0CW00 308 aa27.51■■□□□ 1.99
PKP3-206ENST00000528036 FCER1AP12319 257 aa27.51■■□□□ 1.99
PKP3-206ENST00000528036 ADORA2AP29274 412 aa27.51■■□□□ 1.99
PKP3-206ENST00000528036 RIOX2Q8IUF8 465 aa27.51■■□□□ 1.99
PKP3-206ENST00000528036 STK11IPQ8N1F8 1099 aa27.51■■□□□ 1.99
PKP3-206ENST00000528036 CLIP2Q9UDT6 1046 aa27.51■■□□□ 1.99
PKP3-206ENST00000528036 VWA5AO00534 786 aa27.5■■□□□ 1.99
PKP3-206ENST00000528036 TMEM132BQ14DG7 1078 aa27.5■■□□□ 1.99
PKP3-206ENST00000528036 ALX1Q15699 326 aa27.5■■□□□ 1.99
PKP3-206ENST00000528036 FAM83BQ5T0W9 1011 aa27.5■■□□□ 1.99
PKP3-206ENST00000528036 PRPF38AQ8NAV1 312 aaKnown RBP27.5■■□□□ 1.99
PKP3-206ENST00000528036 SLF1Q9BQI6 1058 aa27.5■■□□□ 1.99
PKP3-206ENST00000528036 LNPKQ9C0E8 428 aa27.5■■□□□ 1.99
PKP3-206ENST00000528036 FDX1P10109 184 aa27.49■■□□□ 1.99
PKP3-206ENST00000528036 STAT3P40763 770 aa27.49■■□□□ 1.99
PKP3-206ENST00000528036 MCMDC2Q4G0Z9 681 aa27.49■■□□□ 1.99
PKP3-206ENST00000528036 CHD1LQ86WJ1 897 aa27.49■■□□□ 1.99
PKP3-206ENST00000528036 GMCL1P1Q8NEA9 526 aa27.49■■□□□ 1.99
PKP3-206ENST00000528036 C11orf49Q9H6J7 331 aa27.49■■□□□ 1.99
PKP3-206ENST00000528036 PRDM1O75626 825 aa27.48■■□□□ 1.99
PKP3-206ENST00000528036 NDUFB10O96000 172 aa27.48■■□□□ 1.99
PKP3-206ENST00000528036 MFAP1P55081 439 aaKnown RBP27.48■■□□□ 1.99
PKP3-206ENST00000528036 SAMD1Q6SPF0 538 aaPredicted RBP27.48■■□□□ 1.99
PKP3-206ENST00000528036 NPLOC4Q8TAT6 608 aa27.48■■□□□ 1.99
PKP3-206ENST00000528036 CEP95Q96GE4 821 aa27.48■■□□□ 1.99
PKP3-206ENST00000528036 OSBPL3Q9H4L5 887 aa27.48■■□□□ 1.99
PKP3-206ENST00000528036 ANAPC4Q9UJX5 808 aa27.48■■□□□ 1.99
PKP3-206ENST00000528036 FEM1BQ9UK73 627 aa27.48■■□□□ 1.99
PKP3-206ENST00000528036 CTDP1Q9Y5B0 961 aaPredicted RBP27.48■■□□□ 1.99
PKP3-206ENST00000528036 IGHA2P01877 340 aa27.47■■□□□ 1.99
PKP3-206ENST00000528036 CCND3P30281 292 aaPredicted RBP27.47■■□□□ 1.99
PKP3-206ENST00000528036 TFAP4Q01664 338 aa27.47■■□□□ 1.99
PKP3-206ENST00000528036 LHX8Q68G74 356 aa27.47■■□□□ 1.99
PKP3-206ENST00000528036 FBXO28Q9NVF7 368 aa27.47■■□□□ 1.99
PKP3-206ENST00000528036 NRBP1Q9UHY1 535 aa27.47■■□□□ 1.99
PKP3-206ENST00000528036 DIS3Q9Y2L1 958 aaKnown RBP27.47■■□□□ 1.99
PKP3-206ENST00000528036 ZBED4O75132 1171 aa27.46■■□□□ 1.99
PKP3-206ENST00000528036 NUCB1Q02818 461 aa27.46■■□□□ 1.99
PKP3-206ENST00000528036 KCTD2Q14681 263 aa27.46■■□□□ 1.99
PKP3-206ENST00000528036 TEX13BQ9BXU2 312 aa27.46■■□□□ 1.99
PKP3-206ENST00000528036 FLRT1Q9NZU1 646 aa27.46■■□□□ 1.99
PKP3-206ENST00000528036 DDX20Q9UHI6 824 aaKnown RBP27.46■■□□□ 1.99
PKP3-206ENST00000528036 A0A0G2JMZ2 1700 aa27.46■■□□□ 1.99
PKP3-206ENST00000528036 GREB1LQ9C091 1923 aaPredicted RBP27.45■■□□□ 1.99
PKP3-206ENST00000528036 TRIM6-TRIM34B2RNG4 842 aa27.45■■□□□ 1.98
PKP3-206ENST00000528036 ATP2A1O14983 1001 aa27.45■■□□□ 1.98
PKP3-206ENST00000528036 MMP19Q99542 508 aa27.45■■□□□ 1.98
PKP3-206ENST00000528036 ZNF214Q9UL59 606 aaPredicted RBP27.45■■□□□ 1.98
PKP3-206ENST00000528036 ZNF236Q9UL36 1845 aa27.45■■□□□ 1.98
PKP3-206ENST00000528036 RLFQ13129 1914 aa27.45■■□□□ 1.98
PKP3-206ENST00000528036 REPS2Q8NFH8 660 aa27.44■■□□□ 1.98
PKP3-206ENST00000528036 EXOC6Q8TAG9 804 aa27.44■■□□□ 1.98
PKP3-206ENST00000528036 DIS3LQ8TF46 1054 aaKnown RBP27.44■■□□□ 1.98
PKP3-206ENST00000528036 COLQQ9Y215 455 aaPredicted RBP27.44■■□□□ 1.98
PKP3-206ENST00000528036 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.44■■□□□ 1.982e-6■■■■□ 20.8
PKP3-206ENST00000528036 ZMYM6O95789 1325 aa27.43■■□□□ 1.98
PKP3-206ENST00000528036 TSPY2A6NKD2 308 aa27.43■■□□□ 1.98
PKP3-206ENST00000528036 COBLO75128 1261 aa27.43■■□□□ 1.98
PKP3-206ENST00000528036 PCP11498 1178 aaKnown RBP27.43■■□□□ 1.98
PKP3-206ENST00000528036 CNGA1P29973 690 aa27.43■■□□□ 1.98
PKP3-206ENST00000528036 NT5C2P49902 561 aa27.43■■□□□ 1.98
PKP3-206ENST00000528036 OAZ1P54368 228 aa27.43■■□□□ 1.98
PKP3-206ENST00000528036 B4GALNT3Q6L9W6 998 aa27.43■■□□□ 1.98
PKP3-206ENST00000528036 CCDC129Q6ZRS4 1044 aa27.43■■□□□ 1.98
PKP3-206ENST00000528036 HIP1O00291 1037 aa27.42■■□□□ 1.98
PKP3-206ENST00000528036 ORC4O43929 436 aa27.42■■□□□ 1.98
PKP3-206ENST00000528036 BMP3P12645 472 aa27.42■■□□□ 1.98
PKP3-206ENST00000528036 CYBAP13498 195 aa27.42■■□□□ 1.98
PKP3-206ENST00000528036 CYP2C19P33261 490 aa27.42■■□□□ 1.98
PKP3-206ENST00000528036 MNX1P50219 401 aaPredicted RBP27.42■■□□□ 1.98
PKP3-206ENST00000528036 SLFN13Q68D06 897 aa27.42■■□□□ 1.98
PKP3-206ENST00000528036 CHURC1Q8WUH1 139 aa27.42■■□□□ 1.98
PKP3-206ENST00000528036 RILPL2Q969X0 211 aa27.42■■□□□ 1.98
PKP3-206ENST00000528036 CEP290O15078 2479 aa27.41■■□□□ 1.98
PKP3-206ENST00000528036 FGRP09769 529 aa27.41■■□□□ 1.98
PKP3-206ENST00000528036 FAM47AQ5JRC9 791 aa27.41■■□□□ 1.98
PKP3-206ENST00000528036 FAM160B2Q86V87 743 aa27.41■■□□□ 1.98
PKP3-206ENST00000528036 PLEKHM2Q8IWE5 1019 aa27.41■■□□□ 1.98
PKP3-206ENST00000528036 MSL3Q8N5Y2 521 aaKnown RBP27.41■■□□□ 1.98
PKP3-206ENST00000528036 ARRDC4Q8NCT1 418 aa27.41■■□□□ 1.98
PKP3-206ENST00000528036 GMCL1Q96IK5 515 aa27.41■■□□□ 1.98
PKP3-206ENST00000528036 MAML3Q96JK9 1138 aa27.41■■□□□ 1.98
PKP3-206ENST00000528036 NUP88Q99567 741 aaPredicted RBP27.41■■□□□ 1.98
PKP3-206ENST00000528036 FBXO40Q9UH90 709 aa27.41■■□□□ 1.98
PKP3-206ENST00000528036 FOXP2O15409 715 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms