RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 NACAP1Q9BZK3 213 aa13.29□□□□□ -0.28
NR1H3-230ENST00000527949 PORCNQ9H237 461 aa13.29□□□□□ -0.28
NR1H3-230ENST00000527949 RWDD1Q9H446 243 aaPredicted RBP13.29□□□□□ -0.28
NR1H3-230ENST00000527949 EPB41L4AQ9HCS5 686 aaPredicted RBP13.29□□□□□ -0.28
NR1H3-230ENST00000527949 NYAP2Q9P242 653 aa13.29□□□□□ -0.28
NR1H3-230ENST00000527949 PARP14Q460N5 1801 aa13.29□□□□□ -0.28
NR1H3-230ENST00000527949 ZNF236Q9UL36 1845 aa13.29□□□□□ -0.28
NR1H3-230ENST00000527949 DNM1LO00429 736 aa13.28□□□□□ -0.28
NR1H3-230ENST00000527949 RASA1P20936 1047 aa13.28□□□□□ -0.28
NR1H3-230ENST00000527949 DSG3P32926 999 aa13.28□□□□□ -0.28
NR1H3-230ENST00000527949 PAGR1Q9BTK6 254 aa13.28□□□□□ -0.28
NR1H3-230ENST00000527949 ADAMTS5Q9UNA0 930 aa13.28□□□□□ -0.28
NR1H3-230ENST00000527949 IVNS1ABPQ9Y6Y0 642 aa13.28□□□□□ -0.28
NR1H3-230ENST00000527949 PLIN4Q96Q06 1357 aa13.28□□□□□ -0.28
NR1H3-230ENST00000527949 IGKV6D-41A0A0C4DH26 115 aa13.27□□□□□ -0.29
NR1H3-230ENST00000527949 SMIM22K7EJ46 135 aa13.27□□□□□ -0.29
NR1H3-230ENST00000527949 M0R2C6 588 aa13.27□□□□□ -0.29
NR1H3-230ENST00000527949 STRNO43815 780 aa13.27□□□□□ -0.29
NR1H3-230ENST00000527949 EEF2P13639 858 aaKnown RBP13.27□□□□□ -0.29
NR1H3-230ENST00000527949 CCND3P30281 292 aaPredicted RBP13.27□□□□□ -0.29
NR1H3-230ENST00000527949 IFNL3Q8IZI9 196 aa13.27□□□□□ -0.29
NR1H3-230ENST00000527949 ARRDC4Q8NCT1 418 aa13.27□□□□□ -0.29
NR1H3-230ENST00000527949 SYMPKQ92797 1274 aaKnown RBP13.27□□□□□ -0.29
NR1H3-230ENST00000527949 YTHDC1Q96MU7 727 aaKnown RBP13.27□□□□□ -0.29
NR1H3-230ENST00000527949 GUCD1Q96NT3 240 aa13.27□□□□□ -0.29
NR1H3-230ENST00000527949 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.27□□□□□ -0.29
NR1H3-230ENST00000527949 SENP6Q9GZR1 1112 aaPredicted RBP13.27□□□□□ -0.29
NR1H3-230ENST00000527949 OSBPL3Q9H4L5 887 aa13.27□□□□□ -0.29
NR1H3-230ENST00000527949 GOPCQ9HD26 462 aa13.27□□□□□ -0.29
NR1H3-230ENST00000527949 BTBD7Q9P203 1132 aa13.27□□□□□ -0.29
NR1H3-230ENST00000527949 DDX20Q9UHI6 824 aaKnown RBP13.27□□□□□ -0.29
NR1H3-230ENST00000527949 IGHA2P01877 340 aa13.26□□□□□ -0.29
NR1H3-230ENST00000527949 PTPREP23469 700 aa13.26□□□□□ -0.29
NR1H3-230ENST00000527949 TDO2P48775 406 aa13.26□□□□□ -0.29
NR1H3-230ENST00000527949 ATP2B2Q01814 1243 aa13.26□□□□□ -0.29
NR1H3-230ENST00000527949 GRB14Q14449 540 aa13.26□□□□□ -0.29
NR1H3-230ENST00000527949 ALX1Q15699 326 aa13.26□□□□□ -0.29
NR1H3-230ENST00000527949 KIAA1755Q5JYT7 1200 aa13.26□□□□□ -0.29
NR1H3-230ENST00000527949 PPP4R3BQ5MIZ7 849 aa13.26□□□□□ -0.29
NR1H3-230ENST00000527949 ABRAQ8N0Z2 381 aa13.26□□□□□ -0.29
NR1H3-230ENST00000527949 MKL1Q969V6 931 aa13.26□□□□□ -0.29
NR1H3-230ENST00000527949 ALPK3Q96L96 1907 aa13.26□□□□□ -0.29
NR1H3-230ENST00000527949 TANGO6Q9C0B7 1094 aa13.26□□□□□ -0.29
NR1H3-230ENST00000527949 MKNK2Q9HBH9 465 aa13.26□□□□□ -0.29
NR1H3-230ENST00000527949 HELLSQ9NRZ9 838 aa13.26□□□□□ -0.29
NR1H3-230ENST00000527949 ZMYM6O95789 1325 aa13.25□□□□□ -0.29
NR1H3-230ENST00000527949 SLC3A2P08195 630 aaKnown RBP13.25□□□□□ -0.29
NR1H3-230ENST00000527949 COPB2P35606 906 aa13.25□□□□□ -0.29
NR1H3-230ENST00000527949 PDE4BQ07343 736 aa13.25□□□□□ -0.29
NR1H3-230ENST00000527949 CCL14Q16627 93 aa13.25□□□□□ -0.29
NR1H3-230ENST00000527949 SPATC1LQ9H0A9 340 aa13.25□□□□□ -0.29
NR1H3-230ENST00000527949 MROH8Q9H579 483 aa13.25□□□□□ -0.29
NR1H3-230ENST00000527949 TMEM265A0A087WTH1 108 aa13.24□□□□□ -0.29
NR1H3-230ENST00000527949 MINDY4BA8MYZ0 360 aa13.24□□□□□ -0.29
NR1H3-230ENST00000527949 PEX10O60683 326 aa13.24□□□□□ -0.29
NR1H3-230ENST00000527949 FLOT1O75955 427 aa13.24□□□□□ -0.29
NR1H3-230ENST00000527949 SLC25A27O95847 323 aa13.24□□□□□ -0.29
NR1H3-230ENST00000527949 APPP05067 770 aa13.24□□□□□ -0.29
NR1H3-230ENST00000527949 CNGA1P29973 690 aa13.24□□□□□ -0.29
NR1H3-230ENST00000527949 SMAD3P84022 425 aaKnown RBP13.24□□□□□ -0.29
NR1H3-230ENST00000527949 NUCB1Q02818 461 aa13.24□□□□□ -0.29
NR1H3-230ENST00000527949 CLEC10AQ8IUN9 316 aa13.24□□□□□ -0.29
NR1H3-230ENST00000527949 ZNF444Q8N0Y2 327 aaPredicted RBP13.24□□□□□ -0.29
NR1H3-230ENST00000527949 NEDD1Q8NHV4 660 aa13.24□□□□□ -0.29
NR1H3-230ENST00000527949 SEC62Q99442 399 aaKnown RBP13.24□□□□□ -0.29
NR1H3-230ENST00000527949 MOV10L1Q9BXT6 1211 aaKnown RBP13.24□□□□□ -0.29
NR1H3-230ENST00000527949 NAPBQ9H115 298 aa13.24□□□□□ -0.29
NR1H3-230ENST00000527949 SLC5A4Q9NY91 659 aa13.24□□□□□ -0.29
NR1H3-230ENST00000527949 ANAPC4Q9UJX5 808 aa13.24□□□□□ -0.29
NR1H3-230ENST00000527949 MYH4Q9Y623 1939 aa13.23□□□□□ -0.29
NR1H3-230ENST00000527949 KBTBD13C9JR72 458 aa13.23□□□□□ -0.29
NR1H3-230ENST00000527949 FOXP2O15409 715 aa13.23□□□□□ -0.29
NR1H3-230ENST00000527949 FGRP09769 529 aa13.23□□□□□ -0.29
NR1H3-230ENST00000527949 RTP1P59025 263 aa13.23□□□□□ -0.29
NR1H3-230ENST00000527949 PPARAQ07869 468 aa13.23□□□□□ -0.29
NR1H3-230ENST00000527949 WDR78Q5VTH9 848 aa13.23□□□□□ -0.29
NR1H3-230ENST00000527949 OLFML2BQ68BL8 750 aa13.23□□□□□ -0.29
NR1H3-230ENST00000527949 CHD1LQ86WJ1 897 aa13.23□□□□□ -0.29
NR1H3-230ENST00000527949 GMCL1P1Q8NEA9 526 aa13.23□□□□□ -0.29
NR1H3-230ENST00000527949 MAFAQ8NHW3 353 aaPredicted RBP13.23□□□□□ -0.29
NR1H3-230ENST00000527949 CDX2Q99626 313 aaPredicted RBP13.23□□□□□ -0.29
NR1H3-230ENST00000527949 MTMR4Q9NYA4 1195 aa13.23□□□□□ -0.29
NR1H3-230ENST00000527949 PPP1R9AQ9ULJ8 1098 aa13.23□□□□□ -0.29
NR1H3-230ENST00000527949 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.23□□□□□ -0.29
NR1H3-230ENST00000527949 ATP2A1O14983 1001 aa13.22□□□□□ -0.29
NR1H3-230ENST00000527949 TTLL1O95922 423 aa13.22□□□□□ -0.29
NR1H3-230ENST00000527949 FDX1P10109 184 aa13.22□□□□□ -0.29
NR1H3-230ENST00000527949 NT5C2P49902 561 aa13.22□□□□□ -0.29
NR1H3-230ENST00000527949 MCMDC2Q4G0Z9 681 aa13.22□□□□□ -0.29
NR1H3-230ENST00000527949 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.22□□□□□ -0.29
NR1H3-230ENST00000527949 RIOX2Q8IUF8 465 aa13.22□□□□□ -0.29
NR1H3-230ENST00000527949 SPICE1Q8N0Z3 855 aa13.22□□□□□ -0.29
NR1H3-230ENST00000527949 EXOC6Q8TAG9 804 aa13.22□□□□□ -0.29
NR1H3-230ENST00000527949 ATG4CQ96DT6 458 aa13.22□□□□□ -0.29
NR1H3-230ENST00000527949 FAM161BQ96MY7 647 aa13.22□□□□□ -0.29
NR1H3-230ENST00000527949 LNPKQ9C0E8 428 aa13.22□□□□□ -0.29
NR1H3-230ENST00000527949 SEMA6BQ9H3T3 888 aa13.22□□□□□ -0.29
NR1H3-230ENST00000527949 PRDM6Q9NQX0 595 aa13.22□□□□□ -0.29
NR1H3-230ENST00000527949 COL11A1P12107 1806 aaPredicted RBP13.21□□□□□ -0.29
NR1H3-230ENST00000527949 F5H6K3 240 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms