RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 XBP1P17861 261 aa14.14□□□□□ -0.15
CAPN1-208ENST00000527323 LEKR1Q6ZMV7 388 aa14.14□□□□□ -0.15
CAPN1-208ENST00000527323 CNKSR2Q8WXI2 1034 aa14.14□□□□□ -0.15
CAPN1-208ENST00000527323 TSPYL1Q9H0U9 437 aa14.14□□□□□ -0.15
CAPN1-208ENST00000527323 ANKZF1Q9H8Y5 726 aa14.14□□□□□ -0.15
CAPN1-208ENST00000527323 ABCB6Q9NP58 842 aa14.14□□□□□ -0.15
CAPN1-208ENST00000527323 FAM205CA6NFA0 338 aa14.14□□□□□ -0.15
CAPN1-208ENST00000527323 MFAP3LO75121 409 aa14.14□□□□□ -0.15
CAPN1-208ENST00000527323 TFRCP02786 760 aaKnown RBP14.14□□□□□ -0.15
CAPN1-208ENST00000527323 RC3H1Q5TC82 1133 aaKnown RBP14.14□□□□□ -0.15
CAPN1-208ENST00000527323 CNGA4Q8IV77 575 aa14.14□□□□□ -0.15
CAPN1-208ENST00000527323 SPATA5Q8NB90 893 aa14.14□□□□□ -0.15
CAPN1-208ENST00000527323 CCDC102AQ96A19 550 aa14.14□□□□□ -0.15
CAPN1-208ENST00000527323 PAGE5Q96GU1 130 aa14.14□□□□□ -0.15
CAPN1-208ENST00000527323 PNKPQ96T60 521 aa14.14□□□□□ -0.15
CAPN1-208ENST00000527323 NUP88Q99567 741 aaPredicted RBP14.14□□□□□ -0.15
CAPN1-208ENST00000527323 TRIM34Q9BYJ4 488 aa14.14□□□□□ -0.15
CAPN1-208ENST00000527323 SUGCTQ9HAC7 445 aa14.14□□□□□ -0.15
CAPN1-208ENST00000527323 VPS54Q9P1Q0 977 aa14.14□□□□□ -0.15
CAPN1-208ENST00000527323 ADD3Q9UEY8 706 aaKnown RBP14.14□□□□□ -0.15
CAPN1-208ENST00000527323 TACC3Q9Y6A5 838 aa14.14□□□□□ -0.15
CAPN1-208ENST00000527323 CDHR2Q9BYE9 1310 aa14.14□□□□□ -0.15
CAPN1-208ENST00000527323 TCRBV5S4A2TA0A5A2 114 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 CTAGE15A4D2H0 777 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 MINDY4BA8MYZ0 360 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 CTAGE8P0CG41 777 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 TNNT3P45378 269 aaPredicted RBP14.13□□□□□ -0.15
CAPN1-208ENST00000527323 HSP90B2PQ58FF3 399 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 BEND6Q5SZJ8 279 aaPredicted RBP14.13□□□□□ -0.15
CAPN1-208ENST00000527323 CLEC4GQ6UXB4 293 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 CTAGE6Q86UF2 777 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 CTAGE4Q8IX94 777 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 MAP2K7O14733 419 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 RIMBP2O15034 1052 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 MUM1L1Q5H9M0 696 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 ZNF654Q8IZM8 581 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 TMTC2Q8N394 836 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 MIGA1Q8NAN2 632 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 ZNF512BQ96KM6 892 aaPredicted RBP14.13□□□□□ -0.15
CAPN1-208ENST00000527323 VPS16Q9H269 839 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 FEZ2Q9UHY8 353 aaPredicted RBP14.13□□□□□ -0.15
CAPN1-208ENST00000527323 MINPP1Q9UNW1 487 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 CTNND2Q9UQB3 1225 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 A0A087X0B3 334 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 GSG1L2A8MUP6 293 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 PHACTR2O75167 634 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 CHRNA5P30532 468 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 FXR1P51114 621 aaKnown RBP eCLIP14.13□□□□□ -0.15
CAPN1-208ENST00000527323 RPS8P62241 208 aaKnown RBP14.13□□□□□ -0.15
CAPN1-208ENST00000527323 ZNF174Q15697 407 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 RASGRP2Q7LDG7 609 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 C10orf67Q8IYJ2 551 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 GOLGA5Q8TBA6 731 aa14.13□□□□□ -0.15
CAPN1-208ENST00000527323 SYMPKQ92797 1274 aaKnown RBP14.13□□□□□ -0.15
CAPN1-208ENST00000527323 NAPGQ99747 312 aaPredicted RBP14.13□□□□□ -0.15
CAPN1-208ENST00000527323 TTF2Q9UNY4 1162 aaKnown RBP14.13□□□□□ -0.15
CAPN1-208ENST00000527323 RIC1Q4ADV7 1423 aa14.12□□□□□ -0.15
CAPN1-208ENST00000527323 SMIM22K7EJ46 135 aa14.12□□□□□ -0.15
CAPN1-208ENST00000527323 ZBTB7AO95365 584 aa14.12□□□□□ -0.15
CAPN1-208ENST00000527323 ZNF622Q969S3 477 aaKnown RBP eCLIP14.12□□□□□ -0.157e-7■■■□□ 15.2
CAPN1-208ENST00000527323 PES1O00541 588 aaKnown RBP14.12□□□□□ -0.15
CAPN1-208ENST00000527323 N4BP1O75113 896 aaKnown RBP14.12□□□□□ -0.15
CAPN1-208ENST00000527323 TUBB2AQ13885 445 aa14.12□□□□□ -0.15
CAPN1-208ENST00000527323 RASGRF1Q13972 1273 aa14.12□□□□□ -0.15
CAPN1-208ENST00000527323 RRAGBQ5VZM2 374 aa14.12□□□□□ -0.15
CAPN1-208ENST00000527323 APTXQ7Z2E3 356 aaKnown RBP14.12□□□□□ -0.15
CAPN1-208ENST00000527323 VGLL2Q8N8G2 317 aa14.12□□□□□ -0.15
CAPN1-208ENST00000527323 SPATA20Q8TB22 786 aa14.12□□□□□ -0.15
CAPN1-208ENST00000527323 LPIN2Q92539 896 aa14.12□□□□□ -0.15
CAPN1-208ENST00000527323 TUBB2BQ9BVA1 445 aa14.12□□□□□ -0.15
CAPN1-208ENST00000527323 BLZF1Q9H2G9 400 aa14.12□□□□□ -0.15
CAPN1-208ENST00000527323 AATFQ9NY61 560 aaKnown RBP eCLIP14.12□□□□□ -0.156e-6■■■■■ 54.7
CAPN1-208ENST00000527323 PRDM1O75626 825 aa14.11□□□□□ -0.15
CAPN1-208ENST00000527323 ABL1P00519 1130 aa14.11□□□□□ -0.15
CAPN1-208ENST00000527323 ARID4AP29374 1257 aaPredicted RBP14.11□□□□□ -0.15
CAPN1-208ENST00000527323 CDC25AP30304 524 aa14.11□□□□□ -0.15
CAPN1-208ENST00000527323 PUM3Q15397 648 aaKnown RBP14.11□□□□□ -0.15
CAPN1-208ENST00000527323 TMTC1Q8IUR5 882 aa14.11□□□□□ -0.15
CAPN1-208ENST00000527323 ANKRD20A12PQ8NF67 263 aa14.11□□□□□ -0.15
CAPN1-208ENST00000527323 HNRNPLLQ8WVV9 542 aaKnown RBP14.11□□□□□ -0.15
CAPN1-208ENST00000527323 SLF1Q9BQI6 1058 aa14.11□□□□□ -0.15
CAPN1-208ENST00000527323 ATF5Q9Y2D1 282 aaPredicted RBP14.11□□□□□ -0.15
CAPN1-208ENST00000527323 GYPCP04921 128 aa14.11□□□□□ -0.15
CAPN1-208ENST00000527323 SLC5A1P13866 664 aa14.11□□□□□ -0.15
CAPN1-208ENST00000527323 ACTN2P35609 894 aa14.11□□□□□ -0.15
CAPN1-208ENST00000527323 CUL4BQ13620 913 aa14.11□□□□□ -0.15
CAPN1-208ENST00000527323 LCORLQ8N3X6 602 aa14.11□□□□□ -0.15
CAPN1-208ENST00000527323 GSDMAQ96QA5 445 aa14.11□□□□□ -0.15
CAPN1-208ENST00000527323 FAN1Q9Y2M0 1017 aa14.11□□□□□ -0.15
CAPN1-208ENST00000527323 C4AP0C0L4 1744 aa14.11□□□□□ -0.15
CAPN1-208ENST00000527323 C4BP0C0L5 1744 aa14.11□□□□□ -0.15
CAPN1-208ENST00000527323 KRT2P35908 639 aa14.11□□□□□ -0.15
CAPN1-208ENST00000527323 VSNL1P62760 191 aa14.11□□□□□ -0.15
CAPN1-208ENST00000527323 RPGRQ92834 1020 aaKnown RBP14.11□□□□□ -0.15
CAPN1-208ENST00000527323 GBP3Q9H0R5 595 aa14.11□□□□□ -0.15
CAPN1-208ENST00000527323 RNF216Q9NWF9 866 aaPredicted RBP14.11□□□□□ -0.15
CAPN1-208ENST00000527323 TAB2Q9NYJ8 693 aa14.11□□□□□ -0.15
CAPN1-208ENST00000527323 LRP2BPQ9P2M1 347 aa14.11□□□□□ -0.15
CAPN1-208ENST00000527323 L1RE1Q9UN81 338 aa14.11□□□□□ -0.15
CAPN1-208ENST00000527323 V9GY48 417 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms