RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 GOLGA8DPQ0D2H9 430 aa11.14□□□□□ -0.63
USP35-201ENST00000526425 DOK7Q18PE1 504 aa11.14□□□□□ -0.63
USP35-201ENST00000526425 EPC1Q9H2F5 836 aa11.14□□□□□ -0.63
USP35-201ENST00000526425 KCNF1Q9H3M0 494 aa11.14□□□□□ -0.63
USP35-201ENST00000526425 MED4Q9NPJ6 270 aa11.14□□□□□ -0.63
USP35-201ENST00000526425 PCDHB6Q9Y5E3 794 aa11.14□□□□□ -0.63
USP35-201ENST00000526425 XDHP47989 1333 aa11.14□□□□□ -0.63
USP35-201ENST00000526425 WDHD1O75717 1129 aaPredicted RBP11.14□□□□□ -0.63
USP35-201ENST00000526425 PNMA6AP0CW24 399 aaPredicted RBP11.14□□□□□ -0.63
USP35-201ENST00000526425 UBASH3AP57075 661 aa11.14□□□□□ -0.63
USP35-201ENST00000526425 NRAPQ86VF7 1730 aa11.14□□□□□ -0.63
USP35-201ENST00000526425 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.14□□□□□ -0.63
USP35-201ENST00000526425 ZC3H12CQ9C0D7 883 aaKnown RBP11.14□□□□□ -0.63
USP35-201ENST00000526425 NBPF3Q9H094 633 aa11.14□□□□□ -0.63
USP35-201ENST00000526425 SPTLC3Q9NUV7 552 aa11.14□□□□□ -0.63
USP35-201ENST00000526425 SERTAD1Q9UHV2 236 aa11.14□□□□□ -0.63
USP35-201ENST00000526425 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.14□□□□□ -0.63
USP35-201ENST00000526425 POLD1P28340 1107 aa11.14□□□□□ -0.63
USP35-201ENST00000526425 KRT2P35908 639 aa11.14□□□□□ -0.63
USP35-201ENST00000526425 SCNN1DP51172 638 aa11.14□□□□□ -0.63
USP35-201ENST00000526425 CEP57Q86XR8 500 aa11.14□□□□□ -0.63
USP35-201ENST00000526425 NUCKS1Q9H1E3 243 aaKnown RBP11.14□□□□□ -0.63
USP35-201ENST00000526425 CEP131Q9UPN4 1083 aa11.14□□□□□ -0.63
USP35-201ENST00000526425 USP17L3A6NCW0 530 aa11.13□□□□□ -0.63
USP35-201ENST00000526425 USP17L4A6NCW7 530 aa11.13□□□□□ -0.63
USP35-201ENST00000526425 FOXN1O15353 648 aa11.13□□□□□ -0.63
USP35-201ENST00000526425 SSBP05455 408 aaKnown RBP eCLIP11.13□□□□□ -0.63
USP35-201ENST00000526425 MFSD14BQ5SR56 506 aa11.13□□□□□ -0.63
USP35-201ENST00000526425 SOGA3Q5TF21 947 aa11.13□□□□□ -0.63
USP35-201ENST00000526425 USP17L1Q7RTZ2 530 aa11.13□□□□□ -0.63
USP35-201ENST00000526425 THOC1Q96FV9 657 aaKnown RBP11.13□□□□□ -0.63
USP35-201ENST00000526425 ZSWIM4Q9H7M6 989 aa11.13□□□□□ -0.63
USP35-201ENST00000526425 LEMD3Q9Y2U8 911 aa11.13□□□□□ -0.63
USP35-201ENST00000526425 RTL9Q8NET4 1388 aa11.13□□□□□ -0.63
USP35-201ENST00000526425 SLU7O95391 586 aaKnown RBP11.13□□□□□ -0.63
USP35-201ENST00000526425 NF2P35240 595 aa11.13□□□□□ -0.63
USP35-201ENST00000526425 CLCN6P51797 869 aa11.13□□□□□ -0.63
USP35-201ENST00000526425 CCDC96Q2M329 555 aa11.13□□□□□ -0.63
USP35-201ENST00000526425 CCDC97Q96F63 343 aaPredicted RBP11.13□□□□□ -0.63
USP35-201ENST00000526425 XPO4Q9C0E2 1151 aaKnown RBP11.13□□□□□ -0.63
USP35-201ENST00000526425 MRFAP1Q9Y605 127 aa11.13□□□□□ -0.63
USP35-201ENST00000526425 BBOX1O75936 387 aa11.13□□□□□ -0.63
USP35-201ENST00000526425 GCKP35557 465 aa11.13□□□□□ -0.63
USP35-201ENST00000526425 SLC39A14Q15043 492 aa11.13□□□□□ -0.63
USP35-201ENST00000526425 MMS22LQ6ZRQ5 1243 aa11.13□□□□□ -0.63
USP35-201ENST00000526425 ILDR1Q86SU0 546 aaPredicted RBP11.13□□□□□ -0.63
USP35-201ENST00000526425 ENAHQ8N8S7 591 aaPredicted RBP11.13□□□□□ -0.63
USP35-201ENST00000526425 WDR66Q8TBY9 1149 aa11.13□□□□□ -0.63
USP35-201ENST00000526425 N4BP2L2Q92802 583 aaPredicted RBP11.13□□□□□ -0.63
USP35-201ENST00000526425 IL17RAQ96F46 866 aa11.13□□□□□ -0.63
USP35-201ENST00000526425 EEF2KMTQ96G04 330 aa11.13□□□□□ -0.63
USP35-201ENST00000526425 GLI3P10071 1580 aa11.13□□□□□ -0.63
USP35-201ENST00000526425 PAPPAQ13219 1627 aa11.12□□□□□ -0.63
USP35-201ENST00000526425 LDHCP07864 332 aa11.12□□□□□ -0.63
USP35-201ENST00000526425 BAG6P46379 1132 aa11.12□□□□□ -0.63
USP35-201ENST00000526425 ATL3Q6DD88 541 aa11.12□□□□□ -0.63
USP35-201ENST00000526425 MRFAP1L1Q96HT8 127 aa11.12□□□□□ -0.63
USP35-201ENST00000526425 N4BP2Q86UW6 1770 aaPredicted RBP11.12□□□□□ -0.63
USP35-201ENST00000526425 TOP1P11387 765 aaKnown RBP11.12□□□□□ -0.63
USP35-201ENST00000526425 KIF5BP33176 963 aa11.12□□□□□ -0.63
USP35-201ENST00000526425 TXLNAP40222 546 aa11.12□□□□□ -0.63
USP35-201ENST00000526425 EN1Q05925 392 aaPredicted RBP11.12□□□□□ -0.63
USP35-201ENST00000526425 SMC1AQ14683 1233 aaKnown RBP11.12□□□□□ -0.63
USP35-201ENST00000526425 NAA25Q14CX7 972 aa11.12□□□□□ -0.63
USP35-201ENST00000526425 LONRF3Q496Y0 759 aa11.12□□□□□ -0.63
USP35-201ENST00000526425 CRACR2BQ8N4Y2 399 aaPredicted RBP11.12□□□□□ -0.63
USP35-201ENST00000526425 BLZF1Q9H2G9 400 aa11.12□□□□□ -0.63
USP35-201ENST00000526425 PCDHA5Q9Y5H7 936 aa11.12□□□□□ -0.63
USP35-201ENST00000526425 TCRBV5S4A2TA0A5A2 114 aa11.12□□□□□ -0.63
USP35-201ENST00000526425 SEMA3EO15041 775 aa11.12□□□□□ -0.63
USP35-201ENST00000526425 ATP1A3P13637 1013 aa11.12□□□□□ -0.63
USP35-201ENST00000526425 TCP10Q12799 353 aa11.12□□□□□ -0.63
USP35-201ENST00000526425 SH3RF3Q8TEJ3 882 aaPredicted RBP11.12□□□□□ -0.63
USP35-201ENST00000526425 CACTINQ8WUQ7 758 aaKnown RBP11.12□□□□□ -0.63
USP35-201ENST00000526425 POLR3EQ9NVU0 708 aa11.12□□□□□ -0.63
USP35-201ENST00000526425 FMNL1O95466 1100 aaPredicted RBP11.11□□□□□ -0.63
USP35-201ENST00000526425 IFNAR1P17181 557 aa11.11□□□□□ -0.63
USP35-201ENST00000526425 ATP2B4P23634 1241 aa11.11□□□□□ -0.63
USP35-201ENST00000526425 GRIN1Q05586 938 aa11.11□□□□□ -0.63
USP35-201ENST00000526425 FBXW10Q5XX13 1052 aa11.11□□□□□ -0.63
USP35-201ENST00000526425 ARL10Q8N8L6 244 aa11.11□□□□□ -0.63
USP35-201ENST00000526425 GOLGA5Q8TBA6 731 aa11.11□□□□□ -0.63
USP35-201ENST00000526425 CCDC102AQ96A19 550 aa11.11□□□□□ -0.63
USP35-201ENST00000526425 CCDC189A1A4V9 331 aa11.11□□□□□ -0.63
USP35-201ENST00000526425 AP1G2O75843 785 aa11.11□□□□□ -0.63
USP35-201ENST00000526425 CMA1P23946 247 aa11.11□□□□□ -0.63
USP35-201ENST00000526425 NBPF9Q3BBW0 867 aa11.11□□□□□ -0.63
USP35-201ENST00000526425 RILPL1Q5EBL4 403 aa11.11□□□□□ -0.63
USP35-201ENST00000526425 SMYD4Q8IYR2 804 aaPredicted RBP11.11□□□□□ -0.63
USP35-201ENST00000526425 FMR1NBQ8N0W7 255 aaPredicted RBP11.11□□□□□ -0.63
USP35-201ENST00000526425 ZHX3Q9H4I2 956 aa11.11□□□□□ -0.63
USP35-201ENST00000526425 GPCPD1Q9NPB8 672 aa11.11□□□□□ -0.63
USP35-201ENST00000526425 SEC63Q9UGP8 760 aaKnown RBP11.11□□□□□ -0.63
USP35-201ENST00000526425 ALDH1B1P30837 517 aa11.11□□□□□ -0.63
USP35-201ENST00000526425 LIFRP42702 1097 aa11.11□□□□□ -0.63
USP35-201ENST00000526425 NAPAP54920 295 aa11.11□□□□□ -0.63
USP35-201ENST00000526425 GSTO1P78417 241 aa11.11□□□□□ -0.63
USP35-201ENST00000526425 CCDC144BQ3MJ40 725 aa11.11□□□□□ -0.63
USP35-201ENST00000526425 DPP8Q6V1X1 898 aaPredicted RBP11.11□□□□□ -0.63
USP35-201ENST00000526425 USP49Q70CQ1 688 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms