RNA–Protein interactions for RNA: ENST00000525528.1

BDNF-212, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 BASIC

Gene BDNF, Length 4,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-212ENST00000525528 SLFN12Q8IYM2 578 aa7.78□□□□□ -1.16
BDNF-212ENST00000525528 RYBPQ8N488 228 aaPredicted RBP7.78□□□□□ -1.16
BDNF-212ENST00000525528 LGR6Q9HBX8 967 aa7.78□□□□□ -1.16
BDNF-212ENST00000525528 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.78□□□□□ -1.16
BDNF-212ENST00000525528 SMCO2A6NFE2 343 aa7.78□□□□□ -1.16
BDNF-212ENST00000525528 C21orf2O43822 256 aa7.78□□□□□ -1.16
BDNF-212ENST00000525528 KCNJ6P48051 423 aa7.78□□□□□ -1.16
BDNF-212ENST00000525528 NFX1Q12986 1120 aaKnown RBP7.78□□□□□ -1.16
BDNF-212ENST00000525528 TTC31Q49AM3 519 aaPredicted RBP7.78□□□□□ -1.16
BDNF-212ENST00000525528 HAUS1Q96CS2 278 aa7.78□□□□□ -1.16
BDNF-212ENST00000525528 NOC4LQ9BVI4 516 aaKnown RBP7.78□□□□□ -1.16
BDNF-212ENST00000525528 RTL1A6NKG5 1358 aa7.77□□□□□ -1.16
BDNF-212ENST00000525528 PCP11498 1178 aaKnown RBP7.77□□□□□ -1.17
BDNF-212ENST00000525528 ANXA13P27216 316 aa7.77□□□□□ -1.17
BDNF-212ENST00000525528 ABCD1P33897 745 aa7.77□□□□□ -1.17
BDNF-212ENST00000525528 RECQLP46063 649 aaPredicted RBP7.77□□□□□ -1.17
BDNF-212ENST00000525528 GYG1P46976 350 aa7.77□□□□□ -1.17
BDNF-212ENST00000525528 MNAT1P51948 309 aa7.77□□□□□ -1.17
BDNF-212ENST00000525528 DIS3L2Q8IYB7 885 aaKnown RBP7.77□□□□□ -1.17
BDNF-212ENST00000525528 UBL4BQ8N7F7 174 aa7.77□□□□□ -1.17
BDNF-212ENST00000525528 KIF9Q9HAQ2 790 aa7.77□□□□□ -1.17
BDNF-212ENST00000525528 FAM8A1Q9UBU6 413 aa7.77□□□□□ -1.17
BDNF-212ENST00000525528 ZNF335Q9H4Z2 1342 aaPredicted RBP7.77□□□□□ -1.17
BDNF-212ENST00000525528 KIAA0232Q92628 1395 aa7.77□□□□□ -1.17
BDNF-212ENST00000525528 CTAGE15A4D2H0 777 aa7.77□□□□□ -1.17
BDNF-212ENST00000525528 VAMP4O75379 141 aa7.77□□□□□ -1.17
BDNF-212ENST00000525528 CTAGE8P0CG41 777 aa7.77□□□□□ -1.17
BDNF-212ENST00000525528 DMP1Q13316 513 aaPredicted RBP7.77□□□□□ -1.17
BDNF-212ENST00000525528 CTAGE6Q86UF2 777 aa7.77□□□□□ -1.17
BDNF-212ENST00000525528 CTAGE4Q8IX94 777 aa7.77□□□□□ -1.17
BDNF-212ENST00000525528 FAM107BQ9H098 131 aa7.77□□□□□ -1.17
BDNF-212ENST00000525528 TRMT1Q9NXH9 659 aaKnown RBP7.77□□□□□ -1.17
BDNF-212ENST00000525528 PSDA5PKW4 1024 aaPredicted RBP7.77□□□□□ -1.17
BDNF-212ENST00000525528 STX17P56962 302 aa7.77□□□□□ -1.17
BDNF-212ENST00000525528 ITKQ08881 620 aa7.77□□□□□ -1.17
BDNF-212ENST00000525528 C10orf67Q8IYJ2 551 aa7.77□□□□□ -1.17
BDNF-212ENST00000525528 NDUFAF2Q8N183 169 aa7.77□□□□□ -1.17
BDNF-212ENST00000525528 VPS52Q8N1B4 723 aa7.77□□□□□ -1.17
BDNF-212ENST00000525528 MYRIPQ8NFW9 859 aa7.77□□□□□ -1.17
BDNF-212ENST00000525528 TMX3Q96JJ7 454 aa7.77□□□□□ -1.17
BDNF-212ENST00000525528 IFT122Q9HBG6 1241 aa7.77□□□□□ -1.17
BDNF-212ENST00000525528 SERPINB13Q9UIV8 391 aa7.77□□□□□ -1.17
BDNF-212ENST00000525528 TNPO2O14787 897 aaKnown RBP7.76□□□□□ -1.17
BDNF-212ENST00000525528 N4BP1O75113 896 aaKnown RBP7.76□□□□□ -1.17
BDNF-212ENST00000525528 ARPP19P56211 112 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 SNW1Q13573 536 aaKnown RBP7.76□□□□□ -1.17
BDNF-212ENST00000525528 HADHQ16836 314 aaKnown RBP7.76□□□□□ -1.17
BDNF-212ENST00000525528 FAM160B2Q86V87 743 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 FOXP4Q8IVH2 680 aaPredicted RBP7.76□□□□□ -1.17
BDNF-212ENST00000525528 COA1Q9GZY4 146 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 GDPD2Q9HCC8 539 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 C1orf112Q9NSG2 853 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 PI4KBQ9UBF8 816 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 PCDHA12Q9UN75 941 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 ZAP70P43403 619 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 CHRNDQ07001 517 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 SLC27A3Q5K4L6 730 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 RNF219Q5W0B1 726 aaPredicted RBP7.76□□□□□ -1.17
BDNF-212ENST00000525528 CASC4Q6P4E1 433 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 CCDC25Q86WR0 208 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 CCDC26Q8TAB7 109 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 CACTINQ8WUQ7 758 aaKnown RBP7.76□□□□□ -1.17
BDNF-212ENST00000525528 PRDM5Q9NQX1 630 aaPredicted RBP7.76□□□□□ -1.17
BDNF-212ENST00000525528 RSPH14Q9UHP6 348 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 IPO11Q9UI26 975 aaKnown RBP7.76□□□□□ -1.17
BDNF-212ENST00000525528 SHANK2Q9UPX8 1470 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 SYCP2Q9BX26 1530 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 NEO1Q92859 1461 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 WDR64B1ANS9 1081 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 HEXIM1O94992 359 aaKnown RBP7.76□□□□□ -1.17
BDNF-212ENST00000525528 COPB2P35606 906 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 LACTBP83111 547 aaPredicted RBP7.76□□□□□ -1.17
BDNF-212ENST00000525528 PPP2R5CQ13362 524 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 POLA2Q14181 598 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 NOLC1Q14978 699 aaKnown RBP eCLIP7.76□□□□□ -1.17
BDNF-212ENST00000525528 PRR16Q569H4 304 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 NBPF11Q86T75 865 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 PALM2Q8IXS6 379 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 EFCAB13Q8IY85 973 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 PNMA1Q8ND90 353 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 SPDYE1Q8NFV5 336 aaPredicted RBP7.76□□□□□ -1.17
BDNF-212ENST00000525528 MAIP1Q8WWC4 291 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.76□□□□□ -1.17
BDNF-212ENST00000525528 HOXC10Q9NYD6 342 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 FEZ2Q9UHY8 353 aaPredicted RBP7.76□□□□□ -1.17
BDNF-212ENST00000525528 POLR3GO15318 223 aaPredicted RBP7.76□□□□□ -1.17
BDNF-212ENST00000525528 ACTN4O43707 911 aaKnown RBP7.76□□□□□ -1.17
BDNF-212ENST00000525528 NNMTP40261 264 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 TUBB4BP68371 445 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 IRX5P78411 483 aaPredicted RBP7.76□□□□□ -1.17
BDNF-212ENST00000525528 PPARAQ07869 468 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 GOLGA8FQ08AF8 430 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 GOLGA8DPQ0D2H9 430 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 HSP90AA4PQ58FG1 418 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 MIS18BP1Q6P0N0 1132 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 SEPT14Q6ZU15 432 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 CNGA4Q8IV77 575 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 FAM178BQ8IXR5 827 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 CSGALNACT2Q8N6G5 542 aa7.76□□□□□ -1.17
BDNF-212ENST00000525528 SKA2Q8WVK7 121 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms