RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 BCAR3O75815 825 aa10.24□□□□□ -0.77
DEPDC1-205ENST00000525124 CYP2E1P05181 493 aaPredicted RBP10.24□□□□□ -0.77
DEPDC1-205ENST00000525124 ELNP15502 786 aa10.24□□□□□ -0.77
DEPDC1-205ENST00000525124 SMPD1P17405 629 aa10.24□□□□□ -0.77
DEPDC1-205ENST00000525124 MMP16P51512 607 aa10.24□□□□□ -0.77
DEPDC1-205ENST00000525124 HMGCS2P54868 508 aa10.24□□□□□ -0.77
DEPDC1-205ENST00000525124 BACE1P56817 501 aa10.24□□□□□ -0.77
DEPDC1-205ENST00000525124 ATP8B2P98198 1209 aa10.24□□□□□ -0.77
DEPDC1-205ENST00000525124 RRP1BQ14684 758 aaKnown RBP10.24□□□□□ -0.77
DEPDC1-205ENST00000525124 ZKSCAN2Q63HK3 967 aa10.24□□□□□ -0.77
DEPDC1-205ENST00000525124 CCDC84Q86UT8 332 aaPredicted RBP10.24□□□□□ -0.77
DEPDC1-205ENST00000525124 SH3RF3Q8TEJ3 882 aaPredicted RBP10.24□□□□□ -0.77
DEPDC1-205ENST00000525124 GTF3C2Q8WUA4 911 aaPredicted RBP10.24□□□□□ -0.77
DEPDC1-205ENST00000525124 ASCC2Q9H1I8 757 aaPredicted RBP10.24□□□□□ -0.77
DEPDC1-205ENST00000525124 GJD2Q9UKL4 321 aa10.24□□□□□ -0.77
DEPDC1-205ENST00000525124 RLFQ13129 1914 aa10.24□□□□□ -0.77
DEPDC1-205ENST00000525124 RANBP2P49792 3224 aaKnown RBP10.24□□□□□ -0.77
DEPDC1-205ENST00000525124 FLT1P17948 1338 aa10.24□□□□□ -0.77
DEPDC1-205ENST00000525124 A0A0G2JMZ2 1700 aa10.24□□□□□ -0.77
DEPDC1-205ENST00000525124 TRIOBPQ9H2D6 2365 aa10.23□□□□□ -0.77
DEPDC1-205ENST00000525124 HMGCRP04035 888 aa10.23□□□□□ -0.77
DEPDC1-205ENST00000525124 TTC39AQ5SRH9 613 aa10.23□□□□□ -0.77
DEPDC1-205ENST00000525124 TRMT44Q8IYL2 757 aaKnown RBP10.23□□□□□ -0.77
DEPDC1-205ENST00000525124 TMEM57Q8N5G2 664 aa10.23□□□□□ -0.77
DEPDC1-205ENST00000525124 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.23□□□□□ -0.77
DEPDC1-205ENST00000525124 DNAJC18Q9H819 358 aa10.23□□□□□ -0.77
DEPDC1-205ENST00000525124 AATFQ9NY61 560 aaKnown RBP eCLIP10.23□□□□□ -0.77
DEPDC1-205ENST00000525124 TNNQ9UQP3 1299 aa10.23□□□□□ -0.77
DEPDC1-205ENST00000525124 RPTORQ8N122 1335 aa10.23□□□□□ -0.77
DEPDC1-205ENST00000525124 USP17L10C9JJH3 530 aa10.22□□□□□ -0.77
DEPDC1-205ENST00000525124 WFS1O76024 890 aa10.22□□□□□ -0.77
DEPDC1-205ENST00000525124 TFRCP02786 760 aaKnown RBP10.22□□□□□ -0.77
DEPDC1-205ENST00000525124 XRCC5P13010 732 aaKnown RBP10.22□□□□□ -0.77
DEPDC1-205ENST00000525124 CD46P15529 392 aa10.22□□□□□ -0.77
DEPDC1-205ENST00000525124 TRIM32Q13049 653 aa10.22□□□□□ -0.77
DEPDC1-205ENST00000525124 NECAB2Q7Z6G3 386 aa10.22□□□□□ -0.77
DEPDC1-205ENST00000525124 GPIHBP1Q8IV16 184 aa10.22□□□□□ -0.77
DEPDC1-205ENST00000525124 SNIP1Q8TAD8 396 aaKnown RBP10.22□□□□□ -0.77
DEPDC1-205ENST00000525124 TGFBRAP1Q8WUH2 860 aa10.22□□□□□ -0.77
DEPDC1-205ENST00000525124 FRAT1Q92837 279 aaPredicted RBP10.22□□□□□ -0.77
DEPDC1-205ENST00000525124 C12orf42Q96LP6 360 aa10.22□□□□□ -0.77
DEPDC1-205ENST00000525124 DEFB118Q96PH6 123 aa10.22□□□□□ -0.77
DEPDC1-205ENST00000525124 DBNDD2Q9BQY9 259 aa10.22□□□□□ -0.77
DEPDC1-205ENST00000525124 BAZ2AQ9UIF9 1905 aaKnown RBP10.21□□□□□ -0.77
DEPDC1-205ENST00000525124 HLA-DOAP06340 250 aa10.21□□□□□ -0.77
DEPDC1-205ENST00000525124 BMP8BP34820 402 aa10.21□□□□□ -0.77
DEPDC1-205ENST00000525124 ZAP70P43403 619 aa10.21□□□□□ -0.77
DEPDC1-205ENST00000525124 HERVK_113P62684 666 aa10.21□□□□□ -0.77
DEPDC1-205ENST00000525124 IRX3P78415 501 aaPredicted RBP10.21□□□□□ -0.77
DEPDC1-205ENST00000525124 NFX1Q12986 1120 aaKnown RBP10.21□□□□□ -0.77
DEPDC1-205ENST00000525124 MTMR2Q13614 643 aa10.21□□□□□ -0.77
DEPDC1-205ENST00000525124 MAP3K21Q5TCX8 1036 aa10.21□□□□□ -0.77
DEPDC1-205ENST00000525124 ADGRA1Q86SQ6 560 aa10.21□□□□□ -0.77
DEPDC1-205ENST00000525124 SOCS4Q8WXH5 440 aa10.21□□□□□ -0.77
DEPDC1-205ENST00000525124 CLUAP1Q96AJ1 413 aa10.21□□□□□ -0.77
DEPDC1-205ENST00000525124 MRGPRX2Q96LB1 330 aa10.21□□□□□ -0.77
DEPDC1-205ENST00000525124 EHD4Q9H223 541 aa10.21□□□□□ -0.77
DEPDC1-205ENST00000525124 HMX1Q9NP08 348 aaPredicted RBP10.21□□□□□ -0.77
DEPDC1-205ENST00000525124 TMOD4Q9NZQ9 345 aa10.21□□□□□ -0.77
DEPDC1-205ENST00000525124 OGDHLQ9ULD0 1010 aa10.21□□□□□ -0.77
DEPDC1-205ENST00000525124 ZBTB21Q9ULJ3 1066 aa10.21□□□□□ -0.77
DEPDC1-205ENST00000525124 COL11A1P12107 1806 aaPredicted RBP10.21□□□□□ -0.78
DEPDC1-205ENST00000525124 PLXNA1Q9UIW2 1896 aa10.21□□□□□ -0.78
DEPDC1-205ENST00000525124 J3QL48 77 aa10.2□□□□□ -0.78
DEPDC1-205ENST00000525124 SURF6O75683 361 aaKnown RBP10.2□□□□□ -0.78
DEPDC1-205ENST00000525124 MAPK4P31152 587 aa10.2□□□□□ -0.78
DEPDC1-205ENST00000525124 JAG1P78504 1218 aa10.2□□□□□ -0.78
DEPDC1-205ENST00000525124 Q3C1V9 767 aa10.2□□□□□ -0.78
DEPDC1-205ENST00000525124 TATDN1Q6P1N9 297 aa10.2□□□□□ -0.78
DEPDC1-205ENST00000525124 USP17L2Q6R6M4 530 aa10.2□□□□□ -0.78
DEPDC1-205ENST00000525124 DNAH12Q6ZR08 3092 aa10.2□□□□□ -0.78
DEPDC1-205ENST00000525124 MAPKAPK5Q8IW41 473 aa10.2□□□□□ -0.78
DEPDC1-205ENST00000525124 CRACR2BQ8N4Y2 399 aaPredicted RBP10.2□□□□□ -0.78
DEPDC1-205ENST00000525124 GPRC5AQ8NFJ5 357 aa10.2□□□□□ -0.78
DEPDC1-205ENST00000525124 USP6NLQ92738 828 aa10.2□□□□□ -0.78
DEPDC1-205ENST00000525124 PAWRQ96IZ0 340 aaKnown RBP10.2□□□□□ -0.78
DEPDC1-205ENST00000525124 P2RX7Q99572 595 aaKnown RBP10.2□□□□□ -0.78
DEPDC1-205ENST00000525124 NUDT12Q9BQG2 462 aa10.2□□□□□ -0.78
DEPDC1-205ENST00000525124 TRIM34Q9BYJ4 488 aa10.2□□□□□ -0.78
DEPDC1-205ENST00000525124 SNRKQ9NRH2 765 aa10.2□□□□□ -0.78
DEPDC1-205ENST00000525124 DBNLQ9UJU6 430 aaKnown RBP10.2□□□□□ -0.78
DEPDC1-205ENST00000525124 ERVK-9P63128 1117 aa10.19□□□□□ -0.78
DEPDC1-205ENST00000525124 ERVK-24P63145 666 aa10.19□□□□□ -0.78
DEPDC1-205ENST00000525124 PLCB2Q00722 1185 aa10.19□□□□□ -0.78
DEPDC1-205ENST00000525124 OS9Q13438 667 aaPredicted RBP10.19□□□□□ -0.78
DEPDC1-205ENST00000525124 LBX2Q6XYB7 198 aa10.19□□□□□ -0.78
DEPDC1-205ENST00000525124 TRIB2Q92519 343 aa10.19□□□□□ -0.78
DEPDC1-205ENST00000525124 GDF15Q99988 308 aa10.19□□□□□ -0.78
DEPDC1-205ENST00000525124 PIH1D3Q9NQM4 214 aaKnown RBP10.19□□□□□ -0.78
DEPDC1-205ENST00000525124 RBPJLQ9UBG7 517 aa10.19□□□□□ -0.78
DEPDC1-205ENST00000525124 PALD1Q9ULE6 856 aa10.19□□□□□ -0.78
DEPDC1-205ENST00000525124 LTBP2Q14767 1821 aa10.19□□□□□ -0.78
DEPDC1-205ENST00000525124 KDM4AO75164 1064 aa10.18□□□□□ -0.78
DEPDC1-205ENST00000525124 DXOO77932 396 aaKnown RBP10.18□□□□□ -0.78
DEPDC1-205ENST00000525124 GDF11O95390 407 aa10.18□□□□□ -0.78
DEPDC1-205ENST00000525124 CYP7A1P22680 504 aa10.18□□□□□ -0.78
DEPDC1-205ENST00000525124 USP14P54578 494 aa10.18□□□□□ -0.78
DEPDC1-205ENST00000525124 TTC6Q86TZ1 520 aa10.18□□□□□ -0.78
DEPDC1-205ENST00000525124 ERC1Q8IUD2 1116 aa10.18□□□□□ -0.78
DEPDC1-205ENST00000525124 HLA-CQ95604 372 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms