RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 TTLL1O95922 423 aa15.24■□□□□ 0.03
TRAPPC4-205ENST00000525079 CCL14Q16627 93 aa15.24■□□□□ 0.03
TRAPPC4-205ENST00000525079 RRP12Q5JTH9 1297 aaKnown RBP15.24■□□□□ 0.03
TRAPPC4-205ENST00000525079 USP6NLQ92738 828 aa15.24■□□□□ 0.03
TRAPPC4-205ENST00000525079 MKL1Q969V6 931 aa15.24■□□□□ 0.03
TRAPPC4-205ENST00000525079 SPATC1LQ9H0A9 340 aa15.24■□□□□ 0.03
TRAPPC4-205ENST00000525079 A0A0G2JMZ2 1700 aa15.23■□□□□ 0.03
TRAPPC4-205ENST00000525079 KIAA0100Q14667 2235 aaKnown RBP15.23■□□□□ 0.03
TRAPPC4-205ENST00000525079 HMGCRP04035 888 aa15.23■□□□□ 0.03
TRAPPC4-205ENST00000525079 GJB1P08034 283 aa15.23■□□□□ 0.03
TRAPPC4-205ENST00000525079 ERCC3P19447 782 aa15.23■□□□□ 0.03
TRAPPC4-205ENST00000525079 PTPREP23469 700 aa15.23■□□□□ 0.03
TRAPPC4-205ENST00000525079 RGS2P41220 211 aa15.23■□□□□ 0.03
TRAPPC4-205ENST00000525079 MFAP1P55081 439 aaKnown RBP15.23■□□□□ 0.03
TRAPPC4-205ENST00000525079 MAP2K5Q13163 448 aa15.23■□□□□ 0.03
TRAPPC4-205ENST00000525079 TMEM132BQ14DG7 1078 aa15.23■□□□□ 0.03
TRAPPC4-205ENST00000525079 NCAPG2Q86XI2 1143 aa15.23■□□□□ 0.03
TRAPPC4-205ENST00000525079 MB21D1Q8N884 522 aa15.23■□□□□ 0.03
TRAPPC4-205ENST00000525079 SHISA4Q96DD7 197 aa15.23■□□□□ 0.03
TRAPPC4-205ENST00000525079 DEFB118Q96PH6 123 aa15.23■□□□□ 0.03
TRAPPC4-205ENST00000525079 IL17RBQ9NRM6 502 aa15.23■□□□□ 0.03
TRAPPC4-205ENST00000525079 PPP1R9AQ9ULJ8 1098 aa15.23■□□□□ 0.03
TRAPPC4-205ENST00000525079 IVNS1ABPQ9Y6Y0 642 aa15.23■□□□□ 0.03
TRAPPC4-205ENST00000525079 PLIN4Q96Q06 1357 aa15.23■□□□□ 0.03
TRAPPC4-205ENST00000525079 COL11A1P12107 1806 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC4-205ENST00000525079 SLC15A5A6NIM6 579 aa15.22■□□□□ 0.03
TRAPPC4-205ENST00000525079 HIP1O00291 1037 aa15.22■□□□□ 0.03
TRAPPC4-205ENST00000525079 ZKSCAN1P17029 563 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC4-205ENST00000525079 GJA8P48165 433 aa15.22■□□□□ 0.03
TRAPPC4-205ENST00000525079 SLFN13Q68D06 897 aa15.22■□□□□ 0.03
TRAPPC4-205ENST00000525079 U2AF1L4Q8WU68 220 aaKnown RBP15.22■□□□□ 0.03
TRAPPC4-205ENST00000525079 NBPF3Q9H094 633 aa15.22■□□□□ 0.03
TRAPPC4-205ENST00000525079 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.22■□□□□ 0.03
TRAPPC4-205ENST00000525079 ISY1Q9ULR0 285 aaKnown RBP15.22■□□□□ 0.03
TRAPPC4-205ENST00000525079 STX8Q9UNK0 236 aa15.22■□□□□ 0.03
TRAPPC4-205ENST00000525079 MTMR7Q9Y216 660 aa15.22■□□□□ 0.03
TRAPPC4-205ENST00000525079 CENPFP49454 3210 aa15.21■□□□□ 0.03
TRAPPC4-205ENST00000525079 VWA5AO00534 786 aa15.21■□□□□ 0.03
TRAPPC4-205ENST00000525079 ORC4O43929 436 aa15.21■□□□□ 0.03
TRAPPC4-205ENST00000525079 SGPL1O95470 568 aa15.21■□□□□ 0.03
TRAPPC4-205ENST00000525079 TFRCP02786 760 aaKnown RBP15.21■□□□□ 0.03
TRAPPC4-205ENST00000525079 FGRP09769 529 aa15.21■□□□□ 0.03
TRAPPC4-205ENST00000525079 XRCC5P13010 732 aaKnown RBP15.21■□□□□ 0.03
TRAPPC4-205ENST00000525079 SLC4A3P48751 1232 aa15.21■□□□□ 0.03
TRAPPC4-205ENST00000525079 TBC1D10CQ8IV04 446 aa15.21■□□□□ 0.03
TRAPPC4-205ENST00000525079 NPLOC4Q8TAT6 608 aa15.21■□□□□ 0.03
TRAPPC4-205ENST00000525079 NKX2-3Q8TAU0 364 aa15.21■□□□□ 0.03
TRAPPC4-205ENST00000525079 APBA2Q99767 749 aa15.21■□□□□ 0.03
TRAPPC4-205ENST00000525079 SLF1Q9BQI6 1058 aa15.21■□□□□ 0.03
TRAPPC4-205ENST00000525079 IL25Q9H293 177 aa15.21■□□□□ 0.03
TRAPPC4-205ENST00000525079 FLRT1Q9NZU1 646 aa15.21■□□□□ 0.03
TRAPPC4-205ENST00000525079 ADAMTS5Q9UNA0 930 aa15.21■□□□□ 0.03
TRAPPC4-205ENST00000525079 ZMYM6O95789 1325 aa15.2■□□□□ 0.02
TRAPPC4-205ENST00000525079 PRKAR2AP13861 404 aaKnown RBP15.2■□□□□ 0.02
TRAPPC4-205ENST00000525079 CACNB2Q08289 660 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC4-205ENST00000525079 GRB14Q14449 540 aa15.2■□□□□ 0.02
TRAPPC4-205ENST00000525079 SKAP1Q86WV1 359 aa15.2■□□□□ 0.02
TRAPPC4-205ENST00000525079 GMCL1P1Q8NEA9 526 aa15.2■□□□□ 0.02
TRAPPC4-205ENST00000525079 SHCBP1Q8NEM2 672 aa15.2■□□□□ 0.02
TRAPPC4-205ENST00000525079 KIFC2Q96AC6 838 aa15.2■□□□□ 0.02
TRAPPC4-205ENST00000525079 HMX1Q9NP08 348 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC4-205ENST00000525079 PAK6Q9NQU5 681 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC4-205ENST00000525079 RPTORQ8N122 1335 aa15.19■□□□□ 0.02
TRAPPC4-205ENST00000525079 ZNF213O14771 459 aa15.19■□□□□ 0.02
TRAPPC4-205ENST00000525079 BMP3P12645 472 aa15.19■□□□□ 0.02
TRAPPC4-205ENST00000525079 MCCP23508 829 aa15.19■□□□□ 0.02
TRAPPC4-205ENST00000525079 ADORA2AP29274 412 aa15.19■□□□□ 0.02
TRAPPC4-205ENST00000525079 STAT3P40763 770 aa15.19■□□□□ 0.02
TRAPPC4-205ENST00000525079 AKNAD1Q5T1N1 836 aa15.19■□□□□ 0.02
TRAPPC4-205ENST00000525079 MFSD6Q6ZSS7 791 aa15.19■□□□□ 0.02
TRAPPC4-205ENST00000525079 RASGRP2Q7LDG7 609 aa15.19■□□□□ 0.02
TRAPPC4-205ENST00000525079 DPP9Q86TI2 863 aa15.19■□□□□ 0.02
TRAPPC4-205ENST00000525079 TRMT44Q8IYL2 757 aaKnown RBP15.19■□□□□ 0.02
TRAPPC4-205ENST00000525079 CPXCR1Q8N123 301 aa15.19■□□□□ 0.02
TRAPPC4-205ENST00000525079 PRPF38AQ8NAV1 312 aaKnown RBP15.19■□□□□ 0.02
TRAPPC4-205ENST00000525079 REPS2Q8NFH8 660 aa15.19■□□□□ 0.02
TRAPPC4-205ENST00000525079 MROH8Q9H579 483 aa15.19■□□□□ 0.02
TRAPPC4-205ENST00000525079 TMEM232C9JQI7 657 aa15.18■□□□□ 0.02
TRAPPC4-205ENST00000525079 STRNO43815 780 aa15.18■□□□□ 0.02
TRAPPC4-205ENST00000525079 COBLO75128 1261 aa15.18■□□□□ 0.02
TRAPPC4-205ENST00000525079 SLC25A27O95847 323 aa15.18■□□□□ 0.02
TRAPPC4-205ENST00000525079 CCND3P30281 292 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC4-205ENST00000525079 RIOX2Q8IUF8 465 aa15.18■□□□□ 0.02
TRAPPC4-205ENST00000525079 STAG1Q8WVM7 1258 aa15.18■□□□□ 0.02
TRAPPC4-205ENST00000525079 DSCC1Q9BVC3 393 aa15.18■□□□□ 0.02
TRAPPC4-205ENST00000525079 FEM1BQ9UK73 627 aa15.18■□□□□ 0.02
TRAPPC4-205ENST00000525079 ZNF214Q9UL59 606 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC4-205ENST00000525079 SYNPO2Q9UMS6 1093 aa15.18■□□□□ 0.02
TRAPPC4-205ENST00000525079 CTDP1Q9Y5B0 961 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC4-205ENST00000525079 NEDD4P46934 1319 aa15.17■□□□□ 0.02
TRAPPC4-205ENST00000525079 ZBED4O75132 1171 aa15.17■□□□□ 0.02
TRAPPC4-205ENST00000525079 FCER1AP12319 257 aa15.17■□□□□ 0.02
TRAPPC4-205ENST00000525079 CHMLP26374 656 aa15.17■□□□□ 0.02
TRAPPC4-205ENST00000525079 CYP2C19P33261 490 aa15.17■□□□□ 0.02
TRAPPC4-205ENST00000525079 SLC1A4P43007 532 aa15.17■□□□□ 0.02
TRAPPC4-205ENST00000525079 IKQ13123 557 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC4-205ENST00000525079 PPP4R3BQ5MIZ7 849 aa15.17■□□□□ 0.02
TRAPPC4-205ENST00000525079 MAP3K21Q5TCX8 1036 aa15.17■□□□□ 0.02
TRAPPC4-205ENST00000525079 SNRNP48Q6IEG0 339 aaKnown RBP15.17■□□□□ 0.02
TRAPPC4-205ENST00000525079 KCTD1Q719H9 257 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms