RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 DNMBPQ6XZF7 1577 aa5.02□□□□□ -1.61
CSDE1-208ENST00000524652 TOPBP1Q92547 1522 aa5.02□□□□□ -1.61
CSDE1-208ENST00000524652 WDR97A6NE52 1622 aa5.01□□□□□ -1.61
CSDE1-208ENST00000524652 GREM1O60565 184 aa5.01□□□□□ -1.61
CSDE1-208ENST00000524652 TMEM253P0C7T8 217 aa5.01□□□□□ -1.61
CSDE1-208ENST00000524652 EIF4A3P38919 411 aaKnown RBP5.01□□□□□ -1.61
CSDE1-208ENST00000524652 CHMP4BP1P59074 171 aa5.01□□□□□ -1.61
CSDE1-208ENST00000524652 TEKQ02763 1124 aa5.01□□□□□ -1.61
CSDE1-208ENST00000524652 SNX17Q15036 470 aa5.01□□□□□ -1.61
CSDE1-208ENST00000524652 CLEC16AQ2KHT3 1053 aa5.01□□□□□ -1.61
CSDE1-208ENST00000524652 SPPL2CQ8IUH8 684 aa5.01□□□□□ -1.61
CSDE1-208ENST00000524652 SIAH1Q8IUQ4 282 aa5.01□□□□□ -1.61
CSDE1-208ENST00000524652 ANKS4BQ8N8V4 417 aa5.01□□□□□ -1.61
CSDE1-208ENST00000524652 FBXO41Q8TF61 875 aa5.01□□□□□ -1.61
CSDE1-208ENST00000524652 KIF2CQ99661 725 aa5.01□□□□□ -1.61
CSDE1-208ENST00000524652 KRTAP4-7Q9BYR0 210 aa5.01□□□□□ -1.61
CSDE1-208ENST00000524652 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.01□□□□□ -1.613e-6■■□□□ 12
CSDE1-208ENST00000524652 BCL11AQ9H165 835 aa5.01□□□□□ -1.61
CSDE1-208ENST00000524652 ASCC2Q9H1I8 757 aaPredicted RBP5.01□□□□□ -1.61
CSDE1-208ENST00000524652 ZNF281Q9Y2X9 895 aa5.01□□□□□ -1.61
CSDE1-208ENST00000524652 TOP2BQ02880 1626 aa5.01□□□□□ -1.61
CSDE1-208ENST00000524652 SLC22A31A6NKX4 558 aa5□□□□□ -1.61
CSDE1-208ENST00000524652 RAG1P15918 1043 aa5□□□□□ -1.61
CSDE1-208ENST00000524652 TRHRP34981 398 aaPredicted RBP5□□□□□ -1.61
CSDE1-208ENST00000524652 NMIQ13287 307 aaPredicted RBP5□□□□□ -1.61
CSDE1-208ENST00000524652 MRPL58Q14197 206 aaKnown RBP5□□□□□ -1.61
CSDE1-208ENST00000524652 TIGD5Q53EQ6 642 aa5□□□□□ -1.61
CSDE1-208ENST00000524652 LCE4AQ5TA78 99 aa5□□□□□ -1.61
CSDE1-208ENST00000524652 RNF111Q6ZNA4 994 aa5□□□□□ -1.61
CSDE1-208ENST00000524652 HS2ST1Q7LGA3 356 aa5□□□□□ -1.61
CSDE1-208ENST00000524652 SYTL5Q8TDW5 730 aaPredicted RBP5□□□□□ -1.61
CSDE1-208ENST00000524652 LINC01599Q8WXQ3 324 aa5□□□□□ -1.61
CSDE1-208ENST00000524652 HDAC8Q9BY41 377 aa5□□□□□ -1.61
CSDE1-208ENST00000524652 C19orf44Q9H6X5 657 aa5□□□□□ -1.61
CSDE1-208ENST00000524652 BRMS1Q9HCU9 246 aa5□□□□□ -1.61
CSDE1-208ENST00000524652 COPRSQ9NQ92 184 aa5□□□□□ -1.61
CSDE1-208ENST00000524652 PCDHB14Q9Y5E9 798 aa5□□□□□ -1.61
CSDE1-208ENST00000524652 TARBP1Q13395 1621 aaKnown RBP5□□□□□ -1.61
CSDE1-208ENST00000524652 TCAF2A6NFQ2 919 aa4.99□□□□□ -1.61
CSDE1-208ENST00000524652 ETV2O00321 342 aaPredicted RBP4.99□□□□□ -1.61
CSDE1-208ENST00000524652 TLR3O15455 904 aaKnown RBP4.99□□□□□ -1.61
CSDE1-208ENST00000524652 UBOX5O94941 541 aa4.99□□□□□ -1.61
CSDE1-208ENST00000524652 CCNFP41002 786 aa4.99□□□□□ -1.61
CSDE1-208ENST00000524652 RAD51AP2Q09MP3 1159 aa4.99□□□□□ -1.61
CSDE1-208ENST00000524652 KCNA10Q16322 511 aa4.99□□□□□ -1.61
CSDE1-208ENST00000524652 ZNF326Q5BKZ1 582 aaKnown RBP4.99□□□□□ -1.61
CSDE1-208ENST00000524652 ARSHQ5FYA8 562 aa4.99□□□□□ -1.61
CSDE1-208ENST00000524652 CDCP2Q5VXM1 449 aa4.99□□□□□ -1.61
CSDE1-208ENST00000524652 ATG14Q6ZNE5 492 aa4.99□□□□□ -1.61
CSDE1-208ENST00000524652 LCNL1Q6ZST4 164 aa4.99□□□□□ -1.61
CSDE1-208ENST00000524652 DAGLBQ8NCG7 672 aa4.99□□□□□ -1.61
CSDE1-208ENST00000524652 BCL2L13Q9BXK5 485 aa4.99□□□□□ -1.61
CSDE1-208ENST00000524652 GZF1Q9H116 711 aaPredicted RBP4.99□□□□□ -1.61
CSDE1-208ENST00000524652 EHMT1Q9H9B1 1298 aa4.99□□□□□ -1.61
CSDE1-208ENST00000524652 YBX2Q9Y2T7 364 aaKnown RBP4.99□□□□□ -1.61
CSDE1-208ENST00000524652 NPIPB6E9PJ23 425 aa4.98□□□□□ -1.61
CSDE1-208ENST00000524652 PEX10O60683 326 aa4.98□□□□□ -1.61
CSDE1-208ENST00000524652 ZSCAN22P10073 491 aaPredicted RBP4.98□□□□□ -1.61
CSDE1-208ENST00000524652 CRKP46108 304 aa4.98□□□□□ -1.61
CSDE1-208ENST00000524652 OVOS1Q6IE37 1185 aa4.98□□□□□ -1.61
CSDE1-208ENST00000524652 REXO1Q8N1G1 1221 aaKnown RBP4.98□□□□□ -1.61
CSDE1-208ENST00000524652 ZNF655Q8N720 491 aaPredicted RBP4.98□□□□□ -1.61
CSDE1-208ENST00000524652 ZNF296Q8WUU4 475 aaPredicted RBP4.98□□□□□ -1.61
CSDE1-208ENST00000524652 INTS4Q96HW7 963 aaKnown RBP4.98□□□□□ -1.61
CSDE1-208ENST00000524652 G6PC3Q9BUM1 346 aa4.98□□□□□ -1.61
CSDE1-208ENST00000524652 CNNM2Q9H8M5 875 aa4.98□□□□□ -1.61
CSDE1-208ENST00000524652 EBF1Q9UH73 591 aa4.98□□□□□ -1.61
CSDE1-208ENST00000524652 GGT7Q9UJ14 662 aa4.98□□□□□ -1.61
CSDE1-208ENST00000524652 POLA1P09884 1462 aaPredicted RBP4.98□□□□□ -1.61
CSDE1-208ENST00000524652 FGD5Q6ZNL6 1462 aa4.98□□□□□ -1.61
CSDE1-208ENST00000524652 WRNQ14191 1432 aaPredicted RBP eCLIP4.97□□□□□ -1.61
CSDE1-208ENST00000524652 SEMA7AO75326 666 aa4.97□□□□□ -1.61
CSDE1-208ENST00000524652 PCBP3P57721 371 aaKnown RBP4.97□□□□□ -1.61
CSDE1-208ENST00000524652 NBPF12Q5TAG4 269 aaPredicted RBP4.97□□□□□ -1.61
CSDE1-208ENST00000524652 CIAPIN1Q6FI81 312 aa4.97□□□□□ -1.61
CSDE1-208ENST00000524652 NLRC3Q7RTR2 1065 aa4.97□□□□□ -1.61
CSDE1-208ENST00000524652 AMIGO3Q86WK7 504 aa4.97□□□□□ -1.61
CSDE1-208ENST00000524652 GIPC2Q8TF65 315 aa4.97□□□□□ -1.61
CSDE1-208ENST00000524652 KCNN1Q92952 543 aa4.97□□□□□ -1.61
CSDE1-208ENST00000524652 KCNK12Q9HB15 430 aa4.97□□□□□ -1.61
CSDE1-208ENST00000524652 GPR160Q9UJ42 338 aa4.97□□□□□ -1.61
CSDE1-208ENST00000524652 RAD54L2Q9Y4B4 1467 aa4.96□□□□□ -1.62
CSDE1-208ENST00000524652 MEIS3P2A8K0S8 358 aa4.96□□□□□ -1.62
CSDE1-208ENST00000524652 CLEC3AO75596 197 aa4.96□□□□□ -1.62
CSDE1-208ENST00000524652 KIR2DL1P43626 348 aaPredicted RBP4.96□□□□□ -1.62
CSDE1-208ENST00000524652 KIR2DL2P43627 348 aaPredicted RBP4.96□□□□□ -1.62
CSDE1-208ENST00000524652 LINC00310P59036 64 aa4.96□□□□□ -1.62
CSDE1-208ENST00000524652 APOBRQ0VD83 1088 aa4.96□□□□□ -1.62
CSDE1-208ENST00000524652 LRRFIP1Q32MZ4 808 aaKnown RBP4.96□□□□□ -1.62
CSDE1-208ENST00000524652 NBPF9Q3BBW0 867 aa4.96□□□□□ -1.62
CSDE1-208ENST00000524652 USHBP1Q8N6Y0 703 aa4.96□□□□□ -1.62
CSDE1-208ENST00000524652 LINC00116Q8NCU8 138 aa4.96□□□□□ -1.62
CSDE1-208ENST00000524652 SHISA4Q96DD7 197 aa4.96□□□□□ -1.62
CSDE1-208ENST00000524652 ATG4CQ96DT6 458 aa4.96□□□□□ -1.62
CSDE1-208ENST00000524652 TCTN2Q96GX1 697 aa4.96□□□□□ -1.62
CSDE1-208ENST00000524652 MCOLN1Q9GZU1 580 aa4.96□□□□□ -1.62
CSDE1-208ENST00000524652 ADAMTS1Q9UHI8 967 aa4.96□□□□□ -1.62
CSDE1-208ENST00000524652 RAPGEFL1Q9UHV5 662 aa4.96□□□□□ -1.62
CSDE1-208ENST00000524652 TCFL5Q9UL49 500 aa4.96□□□□□ -1.62
CSDE1-208ENST00000524652 SMG5Q9UPR3 1016 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms