RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 KIAA1755Q5JYT7 1200 aa11.92□□□□□ -0.5
LAMA4-220ENST00000523765 IER5LQ5T953 404 aa11.92□□□□□ -0.5
LAMA4-220ENST00000523765 MICALL1Q8N3F8 863 aa11.92□□□□□ -0.5
LAMA4-220ENST00000523765 SPATA5Q8NB90 893 aa11.92□□□□□ -0.5
LAMA4-220ENST00000523765 DHX36Q9H2U1 1008 aaKnown RBP11.92□□□□□ -0.5
LAMA4-220ENST00000523765 RPAP3Q9H6T3 665 aaPredicted RBP11.92□□□□□ -0.5
LAMA4-220ENST00000523765 XPNPEP3Q9NQH7 507 aa11.92□□□□□ -0.5
LAMA4-220ENST00000523765 TBX21Q9UL17 535 aa11.92□□□□□ -0.5
LAMA4-220ENST00000523765 RIOK3O14730 519 aaKnown RBP11.91□□□□□ -0.5
LAMA4-220ENST00000523765 TIMP1P01033 207 aa11.91□□□□□ -0.5
LAMA4-220ENST00000523765 CSF2RAP15509 400 aa11.91□□□□□ -0.5
LAMA4-220ENST00000523765 ERCC3P19447 782 aa11.91□□□□□ -0.5
LAMA4-220ENST00000523765 ZNF365Q70YC5 407 aa11.91□□□□□ -0.5
LAMA4-220ENST00000523765 FOXP4Q8IVH2 680 aaPredicted RBP11.91□□□□□ -0.5
LAMA4-220ENST00000523765 SLC44A5Q8NCS7 719 aa11.91□□□□□ -0.5
LAMA4-220ENST00000523765 MAML3Q96JK9 1138 aa11.91□□□□□ -0.5
LAMA4-220ENST00000523765 COPRSQ9NQ92 184 aa11.91□□□□□ -0.5
LAMA4-220ENST00000523765 SNRKQ9NRH2 765 aa11.91□□□□□ -0.5
LAMA4-220ENST00000523765 MYADML2A6NDP7 307 aa11.9□□□□□ -0.5
LAMA4-220ENST00000523765 RFXAPO00287 272 aa11.9□□□□□ -0.5
LAMA4-220ENST00000523765 ADAMTS4O75173 837 aa11.9□□□□□ -0.5
LAMA4-220ENST00000523765 MYOGP15173 224 aa11.9□□□□□ -0.5
LAMA4-220ENST00000523765 GUCY1A2P33402 732 aa11.9□□□□□ -0.5
LAMA4-220ENST00000523765 RAB3GAP1Q15042 981 aa11.9□□□□□ -0.5
LAMA4-220ENST00000523765 MFSD5Q6N075 450 aa11.9□□□□□ -0.5
LAMA4-220ENST00000523765 USP34Q70CQ2 3546 aa11.9□□□□□ -0.5
LAMA4-220ENST00000523765 ANKRD33Q7Z3H0 272 aa11.9□□□□□ -0.5
LAMA4-220ENST00000523765 IL27Q8NEV9 243 aa11.9□□□□□ -0.5
LAMA4-220ENST00000523765 SSH1Q8WYL5 1049 aa11.9□□□□□ -0.5
LAMA4-220ENST00000523765 CDCA7LQ96GN5 454 aa11.9□□□□□ -0.5
LAMA4-220ENST00000523765 NEUROD6Q96NK8 337 aa11.9□□□□□ -0.5
LAMA4-220ENST00000523765 FEZ1Q99689 392 aa11.9□□□□□ -0.5
LAMA4-220ENST00000523765 SPATC1LQ9H0A9 340 aa11.9□□□□□ -0.5
LAMA4-220ENST00000523765 KIAA1683Q9H0B3 1180 aa11.9□□□□□ -0.5
LAMA4-220ENST00000523765 HCN4Q9Y3Q4 1203 aa11.9□□□□□ -0.5
LAMA4-220ENST00000523765 ARIH1Q9Y4X5 557 aaPredicted RBP11.9□□□□□ -0.5
LAMA4-220ENST00000523765 PTPRCP08575 1304 aa11.89□□□□□ -0.51
LAMA4-220ENST00000523765 A0A1W2PRG0 241 aa11.89□□□□□ -0.51
LAMA4-220ENST00000523765 PGK2P07205 417 aa11.89□□□□□ -0.51
LAMA4-220ENST00000523765 ARID4AP29374 1257 aaPredicted RBP11.89□□□□□ -0.51
LAMA4-220ENST00000523765 RABGGTBP53611 331 aa11.89□□□□□ -0.51
LAMA4-220ENST00000523765 PPP4CP60510 307 aa11.89□□□□□ -0.51
LAMA4-220ENST00000523765 MVPQ14764 893 aaKnown RBP11.89□□□□□ -0.51
LAMA4-220ENST00000523765 KRT40Q6A162 431 aa11.89□□□□□ -0.51
LAMA4-220ENST00000523765 TATDN1Q6P1N9 297 aa11.89□□□□□ -0.51
LAMA4-220ENST00000523765 TRIM34Q9BYJ4 488 aa11.89□□□□□ -0.51
LAMA4-220ENST00000523765 GINM1Q9NU53 330 aa11.89□□□□□ -0.51
LAMA4-220ENST00000523765 LRP2BPQ9P2M1 347 aa11.89□□□□□ -0.51
LAMA4-220ENST00000523765 ZNF865P0CJ78 1059 aaPredicted RBP11.88□□□□□ -0.51
LAMA4-220ENST00000523765 RARBP10826 455 aa11.88□□□□□ -0.51
LAMA4-220ENST00000523765 PSEN1P49768 467 aa11.88□□□□□ -0.51
LAMA4-220ENST00000523765 ACLYP53396 1101 aa11.88□□□□□ -0.51
LAMA4-220ENST00000523765 PDAP1Q13442 181 aaKnown RBP11.88□□□□□ -0.51
LAMA4-220ENST00000523765 TMEM31Q5JXX7 168 aa11.88□□□□□ -0.51
LAMA4-220ENST00000523765 NAA16Q6N069 864 aaPredicted RBP11.88□□□□□ -0.51
LAMA4-220ENST00000523765 PPP1R12CQ9BZL4 782 aa11.88□□□□□ -0.51
LAMA4-220ENST00000523765 CD320Q9NPF0 282 aa11.88□□□□□ -0.51
LAMA4-220ENST00000523765 TRIOO75962 3097 aa11.88□□□□□ -0.51
LAMA4-220ENST00000523765 UMODL1Q5DID0 1318 aa11.87□□□□□ -0.51
LAMA4-220ENST00000523765 SYNRGQ9UMZ2 1314 aa11.87□□□□□ -0.51
LAMA4-220ENST00000523765 MUC6Q6W4X9 2439 aa11.87□□□□□ -0.51
LAMA4-220ENST00000523765 DCDC2CA8MYV0 355 aa11.87□□□□□ -0.51
LAMA4-220ENST00000523765 ADCY6O43306 1168 aa11.87□□□□□ -0.51
LAMA4-220ENST00000523765 STRNO43815 780 aa11.87□□□□□ -0.51
LAMA4-220ENST00000523765 TLL1O43897 1013 aa11.87□□□□□ -0.51
LAMA4-220ENST00000523765 UBTFL1P0CB47 393 aaPredicted RBP11.87□□□□□ -0.51
LAMA4-220ENST00000523765 USP14P54578 494 aa11.87□□□□□ -0.51
LAMA4-220ENST00000523765 CCSAPQ6IQ19 270 aaPredicted RBP11.87□□□□□ -0.51
LAMA4-220ENST00000523765 RNF180Q86T96 592 aa11.87□□□□□ -0.51
LAMA4-220ENST00000523765 NCAPG2Q86XI2 1143 aa11.87□□□□□ -0.51
LAMA4-220ENST00000523765 SHCBP1Q8NEM2 672 aa11.87□□□□□ -0.51
LAMA4-220ENST00000523765 TOX2Q96NM4 488 aa11.87□□□□□ -0.51
LAMA4-220ENST00000523765 STARD7Q9NQZ5 370 aa11.87□□□□□ -0.51
LAMA4-220ENST00000523765 EPOPA6NHQ4 379 aa11.86□□□□□ -0.51
LAMA4-220ENST00000523765 CYP2C18P33260 490 aa11.86□□□□□ -0.51
LAMA4-220ENST00000523765 SHMT1P34896 483 aa11.86□□□□□ -0.51
LAMA4-220ENST00000523765 CDK7P50613 346 aa11.86□□□□□ -0.51
LAMA4-220ENST00000523765 PPIGQ13427 754 aaKnown RBP eCLIP11.86□□□□□ -0.51
LAMA4-220ENST00000523765 PLS1Q14651 629 aa11.86□□□□□ -0.51
LAMA4-220ENST00000523765 SEPT2Q15019 361 aa11.86□□□□□ -0.51
LAMA4-220ENST00000523765 KCNA10Q16322 511 aa11.86□□□□□ -0.51
LAMA4-220ENST00000523765 ABCB5Q2M3G0 1257 aa11.86□□□□□ -0.51
LAMA4-220ENST00000523765 CLEC10AQ8IUN9 316 aa11.86□□□□□ -0.51
LAMA4-220ENST00000523765 KLHDC9Q8NEP7 349 aa11.86□□□□□ -0.51
LAMA4-220ENST00000523765 VWCEQ96DN2 955 aa11.86□□□□□ -0.51
LAMA4-220ENST00000523765 ATG4CQ96DT6 458 aa11.86□□□□□ -0.51
LAMA4-220ENST00000523765 SNX27Q96L92 541 aa11.86□□□□□ -0.51
LAMA4-220ENST00000523765 MEIS3Q99687 375 aa11.86□□□□□ -0.51
LAMA4-220ENST00000523765 SLC28A3Q9HAS3 691 aa11.86□□□□□ -0.51
LAMA4-220ENST00000523765 PIH1D3Q9NQM4 214 aaKnown RBP11.86□□□□□ -0.51
LAMA4-220ENST00000523765 COL4A4P53420 1690 aaPredicted RBP11.86□□□□□ -0.51
LAMA4-220ENST00000523765 NAV1Q8NEY1 1877 aa11.86□□□□□ -0.51
LAMA4-220ENST00000523765 ROBO3Q96MS0 1386 aa11.85□□□□□ -0.51
LAMA4-220ENST00000523765 PRRC2BQ5JSZ5 2229 aaKnown RBP11.85□□□□□ -0.51
LAMA4-220ENST00000523765 GPR37L1O60883 481 aa11.85□□□□□ -0.51
LAMA4-220ENST00000523765 BAG3O95817 575 aa11.85□□□□□ -0.51
LAMA4-220ENST00000523765 CYP2E1P05181 493 aaPredicted RBP11.85□□□□□ -0.51
LAMA4-220ENST00000523765 HLA-DOAP06340 250 aa11.85□□□□□ -0.51
LAMA4-220ENST00000523765 COG2Q14746 738 aa11.85□□□□□ -0.51
LAMA4-220ENST00000523765 TMEM132BQ14DG7 1078 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms