RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 CNTNAP4Q9C0A0 1308 aa7.53□□□□□ -1.2
SKP1-211ENST00000523359 B2RBV5 119 aa7.53□□□□□ -1.2
SKP1-211ENST00000523359 IGF2BP3O00425 579 aaKnown RBP eCLIP7.53□□□□□ -1.2
SKP1-211ENST00000523359 U2SURPO15042 1029 aaKnown RBP7.53□□□□□ -1.2
SKP1-211ENST00000523359 CLEC3AO75596 197 aa7.53□□□□□ -1.2
SKP1-211ENST00000523359 ETV3P41162 512 aa7.53□□□□□ -1.2
SKP1-211ENST00000523359 ZNF648Q5T619 568 aaPredicted RBP7.53□□□□□ -1.2
SKP1-211ENST00000523359 TDRD10Q5VZ19 366 aaKnown RBP7.53□□□□□ -1.2
SKP1-211ENST00000523359 DPH6Q7L8W6 267 aa7.53□□□□□ -1.2
SKP1-211ENST00000523359 MICAL1Q8TDZ2 1067 aa7.53□□□□□ -1.2
SKP1-211ENST00000523359 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.53□□□□□ -1.2
SKP1-211ENST00000523359 KRTAP4-8A0A0G2JLE6 195 aa7.52□□□□□ -1.21
SKP1-211ENST00000523359 GNAT3A8MTJ3 354 aa7.52□□□□□ -1.21
SKP1-211ENST00000523359 IKZF1Q13422 519 aa7.52□□□□□ -1.21
SKP1-211ENST00000523359 SERINC3Q13530 473 aa7.52□□□□□ -1.21
SKP1-211ENST00000523359 FXNQ16595 210 aa7.52□□□□□ -1.21
SKP1-211ENST00000523359 DDR2Q16832 855 aa7.52□□□□□ -1.21
SKP1-211ENST00000523359 NKPD1Q17RQ9 610 aa7.52□□□□□ -1.21
SKP1-211ENST00000523359 VHLLQ6RSH7 139 aa7.52□□□□□ -1.21
SKP1-211ENST00000523359 C6orf15Q6UXA7 325 aaPredicted RBP7.52□□□□□ -1.21
SKP1-211ENST00000523359 PPFIBP1Q86W92 1011 aa7.52□□□□□ -1.21
SKP1-211ENST00000523359 ASB11Q8WXH4 323 aa7.52□□□□□ -1.21
SKP1-211ENST00000523359 DHRS1Q96LJ7 313 aa7.52□□□□□ -1.21
SKP1-211ENST00000523359 KREMEN1Q96MU8 473 aa7.52□□□□□ -1.21
SKP1-211ENST00000523359 OSBPL2Q9H1P3 480 aa7.52□□□□□ -1.21
SKP1-211ENST00000523359 PHAXQ9H814 394 aaKnown RBP7.52□□□□□ -1.21
SKP1-211ENST00000523359 FAM86C1Q9NVL1 165 aa7.52□□□□□ -1.21
SKP1-211ENST00000523359 SIRPGQ9P1W8 387 aa7.52□□□□□ -1.21
SKP1-211ENST00000523359 SUCOQ9UBS9 1254 aaKnown RBP7.52□□□□□ -1.21
SKP1-211ENST00000523359 C9IYK1 514 aa7.51□□□□□ -1.21
SKP1-211ENST00000523359 DDAH1O94760 285 aa7.51□□□□□ -1.21
SKP1-211ENST00000523359 PMS1P54277 932 aaKnown RBP7.51□□□□□ -1.21
SKP1-211ENST00000523359 JAG1P78504 1218 aa7.51□□□□□ -1.21
SKP1-211ENST00000523359 ZP2Q05996 745 aa7.51□□□□□ -1.21
SKP1-211ENST00000523359 CCDC144BQ3MJ40 725 aa7.51□□□□□ -1.21
SKP1-211ENST00000523359 GNPTABQ3T906 1256 aa7.51□□□□□ -1.21
SKP1-211ENST00000523359 ZNF746Q6NUN9 644 aaPredicted RBP7.51□□□□□ -1.21
SKP1-211ENST00000523359 SLC23A3Q6PIS1 610 aa7.51□□□□□ -1.21
SKP1-211ENST00000523359 PRDM5Q9NQX1 630 aaPredicted RBP7.51□□□□□ -1.21
SKP1-211ENST00000523359 ZNF214Q9UL59 606 aaPredicted RBP7.51□□□□□ -1.21
SKP1-211ENST00000523359 GJB6O95452 261 aa7.5□□□□□ -1.21
SKP1-211ENST00000523359 TP53P04637 393 aaPredicted RBP7.5□□□□□ -1.21
SKP1-211ENST00000523359 CYP7A1P22680 504 aa7.5□□□□□ -1.21
SKP1-211ENST00000523359 SLC7A5Q01650 507 aa7.5□□□□□ -1.21
SKP1-211ENST00000523359 SFRP5Q5T4F7 317 aa7.5□□□□□ -1.21
SKP1-211ENST00000523359 NBPF12Q5TAG4 269 aaPredicted RBP7.5□□□□□ -1.21
SKP1-211ENST00000523359 KIAA1211LQ6NV74 962 aa7.5□□□□□ -1.21
SKP1-211ENST00000523359 FAM178BQ8IXR5 827 aa7.5□□□□□ -1.21
SKP1-211ENST00000523359 RNF141Q8WVD5 230 aa7.5□□□□□ -1.21
SKP1-211ENST00000523359 KLHL6Q8WZ60 621 aa7.5□□□□□ -1.21
SKP1-211ENST00000523359 VWCEQ96DN2 955 aa7.5□□□□□ -1.21
SKP1-211ENST00000523359 MKRN2Q9H000 416 aaKnown RBP7.5□□□□□ -1.21
SKP1-211ENST00000523359 MAPK8IP1Q9UQF2 711 aa7.5□□□□□ -1.21
SKP1-211ENST00000523359 CCDC85CA6NKD9 419 aa7.49□□□□□ -1.21
SKP1-211ENST00000523359 LRRN2O75325 713 aa7.49□□□□□ -1.21
SKP1-211ENST00000523359 CBX7O95931 251 aa7.49□□□□□ -1.21
SKP1-211ENST00000523359 BMS1Q14692 1282 aaKnown RBP7.49□□□□□ -1.21
SKP1-211ENST00000523359 CCDC144CPQ8IYA2 1237 aa7.49□□□□□ -1.21
SKP1-211ENST00000523359 ZSWIM4Q9H7M6 989 aa7.49□□□□□ -1.21
SKP1-211ENST00000523359 PITPNM2Q9BZ72 1349 aa7.49□□□□□ -1.21
SKP1-211ENST00000523359 PRR33A8MZF0 331 aa7.48□□□□□ -1.21
SKP1-211ENST00000523359 CLCN7P51798 805 aa7.48□□□□□ -1.21
SKP1-211ENST00000523359 RNF4P78317 190 aa7.48□□□□□ -1.21
SKP1-211ENST00000523359 ZNF124Q15973 351 aa7.48□□□□□ -1.21
SKP1-211ENST00000523359 BBS9Q3SYG4 887 aa7.48□□□□□ -1.21
SKP1-211ENST00000523359 AXDND1Q5T1B0 1012 aaPredicted RBP7.48□□□□□ -1.21
SKP1-211ENST00000523359 DCAF15Q66K64 600 aa7.48□□□□□ -1.21
SKP1-211ENST00000523359 MRM1Q6IN84 353 aaKnown RBP7.48□□□□□ -1.21
SKP1-211ENST00000523359 SMARCC1Q92922 1105 aaPredicted RBP7.48□□□□□ -1.21
SKP1-211ENST00000523359 Q96M66 194 aa7.48□□□□□ -1.21
SKP1-211ENST00000523359 ASPNQ9BXN1 380 aa7.48□□□□□ -1.21
SKP1-211ENST00000523359 RASA3Q14644 834 aa7.47□□□□□ -1.21
SKP1-211ENST00000523359 NCAPHQ15003 741 aa7.47□□□□□ -1.21
SKP1-211ENST00000523359 FLAD1Q8NFF5 587 aa7.47□□□□□ -1.21
SKP1-211ENST00000523359 SRPK1Q96SB4 655 aaKnown RBP7.47□□□□□ -1.21
SKP1-211ENST00000523359 PIF1Q9H611 641 aa7.47□□□□□ -1.21
SKP1-211ENST00000523359 CDK11AQ9UQ88 783 aaPredicted RBP7.47□□□□□ -1.21
SKP1-211ENST00000523359 MSRB2Q9Y3D2 182 aa7.47□□□□□ -1.21
SKP1-211ENST00000523359 FAM155AB1AL88 458 aaPredicted RBP7.46□□□□□ -1.22
SKP1-211ENST00000523359 FARP2O94887 1054 aaPredicted RBP7.46□□□□□ -1.22
SKP1-211ENST00000523359 CDKAL1Q5VV42 579 aa7.46□□□□□ -1.22
SKP1-211ENST00000523359 MKL1Q969V6 931 aa7.46□□□□□ -1.22
SKP1-211ENST00000523359 COX4I2Q96KJ9 171 aa7.46□□□□□ -1.22
SKP1-211ENST00000523359 HSPA12BQ96MM6 686 aa7.46□□□□□ -1.22
SKP1-211ENST00000523359 DEPDC7Q96QD5 511 aa7.46□□□□□ -1.22
SKP1-211ENST00000523359 SNTG2Q9NY99 539 aa7.46□□□□□ -1.22
SKP1-211ENST00000523359 FAM221BA6H8Z2 402 aa7.45□□□□□ -1.22
SKP1-211ENST00000523359 ZNF865P0CJ78 1059 aaPredicted RBP7.45□□□□□ -1.22
SKP1-211ENST00000523359 KIR3DL1P43629 444 aa7.45□□□□□ -1.22
SKP1-211ENST00000523359 TNK2Q07912 1038 aa7.45□□□□□ -1.22
SKP1-211ENST00000523359 SNW1Q13573 536 aaKnown RBP7.45□□□□□ -1.22
SKP1-211ENST00000523359 ZSWIM9Q86XI8 627 aa7.45□□□□□ -1.22
SKP1-211ENST00000523359 C7orf61Q8IZ16 206 aa7.45□□□□□ -1.22
SKP1-211ENST00000523359 MFSD4AQ8N468 514 aa7.45□□□□□ -1.22
SKP1-211ENST00000523359 DTWD2Q8NBA8 298 aa7.45□□□□□ -1.22
SKP1-211ENST00000523359 HAUS7Q99871 368 aa7.45□□□□□ -1.22
SKP1-211ENST00000523359 CCDC113Q9H0I3 377 aa7.45□□□□□ -1.22
SKP1-211ENST00000523359 CARS2Q9HA77 564 aaKnown RBP7.45□□□□□ -1.22
SKP1-211ENST00000523359 ATP13A1Q9HD20 1204 aa7.45□□□□□ -1.22
SKP1-211ENST00000523359 FBXL21Q9UKT6 434 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms