RNA–Protein interactions for RNA: ENST00000523004.1

GM2A-202, Transcript of GM2 ganglioside activator, humanhuman

TSL 1 (best)

Gene GM2A, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-202ENST00000523004 LBHD1Q9BQE6 289 aaPredicted RBP9.5□□□□□ -0.89
GM2A-202ENST00000523004 BOLA2Q9H3K6 86 aa9.5□□□□□ -0.89
GM2A-202ENST00000523004 SH2D4AQ9H788 454 aa9.5□□□□□ -0.89
GM2A-202ENST00000523004 SLC5A4Q9NY91 659 aa9.5□□□□□ -0.89
GM2A-202ENST00000523004 ADAMTS5Q9UNA0 930 aa9.5□□□□□ -0.89
GM2A-202ENST00000523004 LTBP2Q14767 1821 aa9.49□□□□□ -0.89
GM2A-202ENST00000523004 CYP2D7A0A087X1C5 515 aa9.49□□□□□ -0.89
GM2A-202ENST00000523004 USP17L12C9JPN9 530 aa9.49□□□□□ -0.89
GM2A-202ENST00000523004 KBTBD13C9JR72 458 aa9.49□□□□□ -0.89
GM2A-202ENST00000523004 USP17L21D6R901 530 aa9.49□□□□□ -0.89
GM2A-202ENST00000523004 WDR46O15213 610 aaKnown RBP9.49□□□□□ -0.89
GM2A-202ENST00000523004 FCER1AP12319 257 aa9.49□□□□□ -0.89
GM2A-202ENST00000523004 PLS1Q14651 629 aa9.49□□□□□ -0.89
GM2A-202ENST00000523004 TMEM132BQ14DG7 1078 aa9.49□□□□□ -0.89
GM2A-202ENST00000523004 SNX17Q15036 470 aa9.49□□□□□ -0.89
GM2A-202ENST00000523004 UBE3CQ15386 1083 aa9.49□□□□□ -0.89
GM2A-202ENST00000523004 PRAMEF19Q5SWL8 479 aa9.49□□□□□ -0.89
GM2A-202ENST00000523004 FAM109BQ6ICB4 259 aaPredicted RBP9.49□□□□□ -0.89
GM2A-202ENST00000523004 SLC39A5Q6ZMH5 540 aa9.49□□□□□ -0.89
GM2A-202ENST00000523004 NCAPG2Q86XI2 1143 aa9.49□□□□□ -0.89
GM2A-202ENST00000523004 MAML3Q96JK9 1138 aa9.49□□□□□ -0.89
GM2A-202ENST00000523004 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.49□□□□□ -0.89
GM2A-202ENST00000523004 COG6Q9Y2V7 657 aa9.49□□□□□ -0.89
GM2A-202ENST00000523004 PLXNA1Q9UIW2 1896 aa9.49□□□□□ -0.89
GM2A-202ENST00000523004 EYSQ5T1H1 3165 aa9.49□□□□□ -0.89
GM2A-202ENST00000523004 SLC25A27O95847 323 aa9.48□□□□□ -0.89
GM2A-202ENST00000523004 CHGBP05060 677 aa9.48□□□□□ -0.89
GM2A-202ENST00000523004 EEF2P13639 858 aaKnown RBP9.48□□□□□ -0.89
GM2A-202ENST00000523004 LRRC41Q15345 812 aa9.48□□□□□ -0.89
GM2A-202ENST00000523004 C1orf53Q5VUE5 145 aa9.48□□□□□ -0.89
GM2A-202ENST00000523004 ANO1Q5XXA6 986 aa9.48□□□□□ -0.89
GM2A-202ENST00000523004 CTR9Q6PD62 1173 aa9.48□□□□□ -0.89
GM2A-202ENST00000523004 AMOTL1Q8IY63 956 aa9.48□□□□□ -0.89
GM2A-202ENST00000523004 BCL11AQ9H165 835 aa9.48□□□□□ -0.89
GM2A-202ENST00000523004 RNF39Q9H2S5 420 aa9.48□□□□□ -0.89
GM2A-202ENST00000523004 KANSL2Q9H9L4 492 aa9.48□□□□□ -0.89
GM2A-202ENST00000523004 FBXO28Q9NVF7 368 aa9.48□□□□□ -0.89
GM2A-202ENST00000523004 PRKAG2Q9UGJ0 569 aa9.48□□□□□ -0.89
GM2A-202ENST00000523004 NRBP1Q9UHY1 535 aa9.48□□□□□ -0.89
GM2A-202ENST00000523004 ATP11BQ9Y2G3 1177 aa9.48□□□□□ -0.89
GM2A-202ENST00000523004 PRUNE2Q8WUY3 3088 aa9.48□□□□□ -0.89
GM2A-202ENST00000523004 GREB1LQ9C091 1923 aaPredicted RBP9.47□□□□□ -0.89
GM2A-202ENST00000523004 CDH23Q9H251 3354 aa9.47□□□□□ -0.89
GM2A-202ENST00000523004 VWA5AO00534 786 aa9.47□□□□□ -0.89
GM2A-202ENST00000523004 ADCYAP1R1P41586 468 aa9.47□□□□□ -0.89
GM2A-202ENST00000523004 FAM47AQ5JRC9 791 aa9.47□□□□□ -0.89
GM2A-202ENST00000523004 RIOX2Q8IUF8 465 aa9.47□□□□□ -0.89
GM2A-202ENST00000523004 DDRGK1Q96HY6 314 aa9.47□□□□□ -0.89
GM2A-202ENST00000523004 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.47□□□□□ -0.89
GM2A-202ENST00000523004 PUS7LQ9H0K6 701 aaKnown RBP9.47□□□□□ -0.89
GM2A-202ENST00000523004 CHMP4BQ9H444 224 aaKnown RBP9.47□□□□□ -0.89
GM2A-202ENST00000523004 GOPCQ9HD26 462 aa9.47□□□□□ -0.89
GM2A-202ENST00000523004 PPP4R2Q9NY27 417 aa9.47□□□□□ -0.89
GM2A-202ENST00000523004 ZNF214Q9UL59 606 aaPredicted RBP9.47□□□□□ -0.89
GM2A-202ENST00000523004 PPP1R9AQ9ULJ8 1098 aa9.47□□□□□ -0.89
GM2A-202ENST00000523004 DIS3Q9Y2L1 958 aaKnown RBP9.47□□□□□ -0.89
GM2A-202ENST00000523004 SLC4A4Q9Y6R1 1079 aa9.47□□□□□ -0.89
GM2A-202ENST00000523004 PGK2P07205 417 aa9.46□□□□□ -0.9
GM2A-202ENST00000523004 STAT3P40763 770 aa9.46□□□□□ -0.9
GM2A-202ENST00000523004 SHHQ15465 462 aa9.46□□□□□ -0.9
GM2A-202ENST00000523004 ZNF792Q3KQV3 632 aa9.46□□□□□ -0.9
GM2A-202ENST00000523004 TRIM60Q495X7 471 aa9.46□□□□□ -0.9
GM2A-202ENST00000523004 SBK1Q52WX2 424 aa9.46□□□□□ -0.9
GM2A-202ENST00000523004 ZSCAN25Q6NSZ9 544 aa9.46□□□□□ -0.9
GM2A-202ENST00000523004 SAMD1Q6SPF0 538 aaPredicted RBP9.46□□□□□ -0.9
GM2A-202ENST00000523004 REPS2Q8NFH8 660 aa9.46□□□□□ -0.9
GM2A-202ENST00000523004 FERMT2Q96AC1 680 aa9.46□□□□□ -0.9
GM2A-202ENST00000523004 GUCD1Q96NT3 240 aa9.46□□□□□ -0.9
GM2A-202ENST00000523004 STRBPQ96SI9 672 aaKnown RBP9.46□□□□□ -0.9
GM2A-202ENST00000523004 MMP19Q99542 508 aa9.46□□□□□ -0.9
GM2A-202ENST00000523004 TINF2Q9BSI4 451 aa9.46□□□□□ -0.9
GM2A-202ENST00000523004 LRRCC1Q9C099 1032 aa9.46□□□□□ -0.9
GM2A-202ENST00000523004 PDLIM7Q9NR12 457 aa9.46□□□□□ -0.9
GM2A-202ENST00000523004 PHF24Q9UPV7 400 aa9.46□□□□□ -0.9
GM2A-202ENST00000523004 VCANP13611 3396 aa9.46□□□□□ -0.9
GM2A-202ENST00000523004 TRIM43BA6NCK2 446 aa9.45□□□□□ -0.9
GM2A-202ENST00000523004 RARBP10826 455 aa9.45□□□□□ -0.9
GM2A-202ENST00000523004 COPB2P35606 906 aa9.45□□□□□ -0.9
GM2A-202ENST00000523004 KCTD2Q14681 263 aa9.45□□□□□ -0.9
GM2A-202ENST00000523004 C9orf50Q5SZB4 431 aa9.45□□□□□ -0.9
GM2A-202ENST00000523004 FAM83BQ5T0W9 1011 aa9.45□□□□□ -0.9
GM2A-202ENST00000523004 GIMAP6Q6P9H5 292 aa9.45□□□□□ -0.9
GM2A-202ENST00000523004 SH3RF1Q7Z6J0 888 aa9.45□□□□□ -0.9
GM2A-202ENST00000523004 BADQ92934 168 aa9.45□□□□□ -0.9
GM2A-202ENST00000523004 TRIM43Q96BQ3 446 aaPredicted RBP9.45□□□□□ -0.9
GM2A-202ENST00000523004 XPNPEP3Q9NQH7 507 aa9.45□□□□□ -0.9
GM2A-202ENST00000523004 NYAP2Q9P242 653 aa9.45□□□□□ -0.9
GM2A-202ENST00000523004 ARPP21Q9UBL0 812 aaPredicted RBP9.45□□□□□ -0.9
GM2A-202ENST00000523004 RCAN3Q9UKA8 241 aa9.45□□□□□ -0.9
GM2A-202ENST00000523004 ROBO3Q96MS0 1386 aa9.45□□□□□ -0.9
GM2A-202ENST00000523004 MYH4Q9Y623 1939 aa9.44□□□□□ -0.9
GM2A-202ENST00000523004 MCM3APO60318 1980 aa9.44□□□□□ -0.9
GM2A-202ENST00000523004 MYO9BQ13459 2157 aa9.44□□□□□ -0.9
GM2A-202ENST00000523004 GSG1L2A8MUP6 293 aa9.44□□□□□ -0.9
GM2A-202ENST00000523004 SMARCA5O60264 1052 aaPredicted RBP9.44□□□□□ -0.9
GM2A-202ENST00000523004 PGK1P00558 417 aa9.44□□□□□ -0.9
GM2A-202ENST00000523004 ZNF865P0CJ78 1059 aaPredicted RBP9.44□□□□□ -0.9
GM2A-202ENST00000523004 TAL1P17542 331 aaPredicted RBP9.44□□□□□ -0.9
GM2A-202ENST00000523004 RASA1P20936 1047 aa9.44□□□□□ -0.9
GM2A-202ENST00000523004 TLE2Q04725 743 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms