RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 USP17L21D6R901 530 aa11.31□□□□□ -0.6
SDC2-207ENST00000522911 MBD4O95243 580 aa11.31□□□□□ -0.6
SDC2-207ENST00000522911 CYP2D6P10635 497 aa11.31□□□□□ -0.6
SDC2-207ENST00000522911 AKR1B1P15121 316 aa11.31□□□□□ -0.6
SDC2-207ENST00000522911 CNGA1P29973 690 aa11.31□□□□□ -0.6
SDC2-207ENST00000522911 RTP1P59025 263 aa11.31□□□□□ -0.6
SDC2-207ENST00000522911 TMEM132BQ14DG7 1078 aa11.31□□□□□ -0.6
SDC2-207ENST00000522911 SBK1Q52WX2 424 aa11.31□□□□□ -0.6
SDC2-207ENST00000522911 SLC39A5Q6ZMH5 540 aa11.31□□□□□ -0.6
SDC2-207ENST00000522911 ATG4CQ96DT6 458 aa11.31□□□□□ -0.6
SDC2-207ENST00000522911 DDRGK1Q96HY6 314 aa11.31□□□□□ -0.6
SDC2-207ENST00000522911 ZNF214Q9UL59 606 aaPredicted RBP11.31□□□□□ -0.6
SDC2-207ENST00000522911 PARP14Q460N5 1801 aa11.3□□□□□ -0.6
SDC2-207ENST00000522911 DLL1O00548 723 aa11.3□□□□□ -0.6
SDC2-207ENST00000522911 ATP2A1O14983 1001 aa11.3□□□□□ -0.6
SDC2-207ENST00000522911 MDM2Q00987 491 aaPredicted RBP11.3□□□□□ -0.6
SDC2-207ENST00000522911 LRRC41Q15345 812 aa11.3□□□□□ -0.6
SDC2-207ENST00000522911 CTR9Q6PD62 1173 aa11.3□□□□□ -0.6
SDC2-207ENST00000522911 MIER1Q8N108 512 aa11.3□□□□□ -0.6
SDC2-207ENST00000522911 REPS2Q8NFH8 660 aa11.3□□□□□ -0.6
SDC2-207ENST00000522911 DYNLL2Q96FJ2 89 aa11.3□□□□□ -0.6
SDC2-207ENST00000522911 BOLA2Q9H3K6 86 aa11.3□□□□□ -0.6
SDC2-207ENST00000522911 GOPCQ9HD26 462 aa11.3□□□□□ -0.6
SDC2-207ENST00000522911 ARPP21Q9UBL0 812 aaPredicted RBP11.3□□□□□ -0.6
SDC2-207ENST00000522911 PRKAG2Q9UGJ0 569 aa11.3□□□□□ -0.6
SDC2-207ENST00000522911 PPP1R9AQ9ULJ8 1098 aa11.3□□□□□ -0.6
SDC2-207ENST00000522911 GREB1LQ9C091 1923 aaPredicted RBP11.29□□□□□ -0.6
SDC2-207ENST00000522911 VWA5AO00534 786 aa11.29□□□□□ -0.6
SDC2-207ENST00000522911 PRKAB2O43741 272 aa11.29□□□□□ -0.6
SDC2-207ENST00000522911 EEF2P13639 858 aaKnown RBP11.29□□□□□ -0.6
SDC2-207ENST00000522911 ZNF792Q3KQV3 632 aa11.29□□□□□ -0.6
SDC2-207ENST00000522911 Q7L0L9 218 aa11.29□□□□□ -0.6
SDC2-207ENST00000522911 NCAPG2Q86XI2 1143 aa11.29□□□□□ -0.6
SDC2-207ENST00000522911 TINF2Q9BSI4 451 aa11.29□□□□□ -0.6
SDC2-207ENST00000522911 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.29□□□□□ -0.6
SDC2-207ENST00000522911 LRRCC1Q9C099 1032 aa11.29□□□□□ -0.6
SDC2-207ENST00000522911 NYAP2Q9P242 653 aa11.29□□□□□ -0.6
SDC2-207ENST00000522911 PHF24Q9UPV7 400 aa11.29□□□□□ -0.6
SDC2-207ENST00000522911 LTBP2Q14767 1821 aa11.29□□□□□ -0.6
SDC2-207ENST00000522911 PRUNE2Q8WUY3 3088 aa11.29□□□□□ -0.6
SDC2-207ENST00000522911 TMEM265A0A087WTH1 108 aa11.28□□□□□ -0.6
SDC2-207ENST00000522911 STAT3P40763 770 aa11.28□□□□□ -0.6
SDC2-207ENST00000522911 GJC2Q5T442 439 aaPredicted RBP11.28□□□□□ -0.6
SDC2-207ENST00000522911 MAMDC4Q6UXC1 1216 aa11.28□□□□□ -0.6
SDC2-207ENST00000522911 ZNF467Q7Z7K2 595 aaPredicted RBP11.28□□□□□ -0.6
SDC2-207ENST00000522911 SPICE1Q8N0Z3 855 aa11.28□□□□□ -0.6
SDC2-207ENST00000522911 MKL1Q969V6 931 aa11.28□□□□□ -0.6
SDC2-207ENST00000522911 TOX2Q96NM4 488 aa11.28□□□□□ -0.6
SDC2-207ENST00000522911 STRBPQ96SI9 672 aaKnown RBP11.28□□□□□ -0.6
SDC2-207ENST00000522911 TSEN34Q9BSV6 310 aaKnown RBP11.28□□□□□ -0.6
SDC2-207ENST00000522911 PUS7LQ9H0K6 701 aaKnown RBP11.28□□□□□ -0.6
SDC2-207ENST00000522911 PDLIM7Q9NR12 457 aa11.28□□□□□ -0.6
SDC2-207ENST00000522911 COG6Q9Y2V7 657 aa11.28□□□□□ -0.6
SDC2-207ENST00000522911 SLC4A4Q9Y6R1 1079 aa11.28□□□□□ -0.6
SDC2-207ENST00000522911 SYNGAP1Q96PV0 1343 aa11.28□□□□□ -0.6
SDC2-207ENST00000522911 DNAJC25-GNG10A0A024R161 153 aa11.27□□□□□ -0.61
SDC2-207ENST00000522911 IGKV6D-41A0A0C4DH26 115 aa11.27□□□□□ -0.61
SDC2-207ENST00000522911 GSG1L2A8MUP6 293 aa11.27□□□□□ -0.61
SDC2-207ENST00000522911 ZFYP08048 801 aaPredicted RBP11.27□□□□□ -0.61
SDC2-207ENST00000522911 ZNF865P0CJ78 1059 aaPredicted RBP11.27□□□□□ -0.61
SDC2-207ENST00000522911 RARBP10826 455 aa11.27□□□□□ -0.61
SDC2-207ENST00000522911 ATN1P54259 1190 aaPredicted RBP11.27□□□□□ -0.61
SDC2-207ENST00000522911 SMAD3P84022 425 aaKnown RBP11.27□□□□□ -0.61
SDC2-207ENST00000522911 PLS1Q14651 629 aa11.27□□□□□ -0.61
SDC2-207ENST00000522911 KCTD2Q14681 263 aa11.27□□□□□ -0.61
SDC2-207ENST00000522911 FAM47AQ5JRC9 791 aa11.27□□□□□ -0.61
SDC2-207ENST00000522911 ANKRD33Q7Z3H0 272 aa11.27□□□□□ -0.61
SDC2-207ENST00000522911 RNF180Q86T96 592 aa11.27□□□□□ -0.61
SDC2-207ENST00000522911 CLEC10AQ8IUN9 316 aa11.27□□□□□ -0.61
SDC2-207ENST00000522911 KBTBD3Q8NAB2 608 aa11.27□□□□□ -0.61
SDC2-207ENST00000522911 PRPF38AQ8NAV1 312 aaKnown RBP11.27□□□□□ -0.61
SDC2-207ENST00000522911 MMP19Q99542 508 aa11.27□□□□□ -0.61
SDC2-207ENST00000522911 TEX13BQ9BXU2 312 aa11.27□□□□□ -0.61
SDC2-207ENST00000522911 FBXO28Q9NVF7 368 aa11.27□□□□□ -0.61
SDC2-207ENST00000522911 TACC3Q9Y6A5 838 aa11.27□□□□□ -0.61
SDC2-207ENST00000522911 MUC3AQ02505 3323 aa11.27□□□□□ -0.61
SDC2-207ENST00000522911 MYH8P13535 1937 aa11.27□□□□□ -0.61
SDC2-207ENST00000522911 CYP2D7A0A087X1C5 515 aa11.26□□□□□ -0.61
SDC2-207ENST00000522911 SMIM22K7EJ46 135 aa11.26□□□□□ -0.61
SDC2-207ENST00000522911 KIAA0355O15063 1070 aa11.26□□□□□ -0.61
SDC2-207ENST00000522911 ADAMTS4O75173 837 aa11.26□□□□□ -0.61
SDC2-207ENST00000522911 FDX1P10109 184 aa11.26□□□□□ -0.61
SDC2-207ENST00000522911 AKR1A1P14550 325 aa11.26□□□□□ -0.61
SDC2-207ENST00000522911 GNAT2P19087 354 aa11.26□□□□□ -0.61
SDC2-207ENST00000522911 RASA1P20936 1047 aa11.26□□□□□ -0.61
SDC2-207ENST00000522911 CST5P28325 142 aaPredicted RBP11.26□□□□□ -0.61
SDC2-207ENST00000522911 ADCYAP1R1P41586 468 aa11.26□□□□□ -0.61
SDC2-207ENST00000522911 SLFNL1Q499Z3 407 aa11.26□□□□□ -0.61
SDC2-207ENST00000522911 APPBP2Q92624 585 aa11.26□□□□□ -0.61
SDC2-207ENST00000522911 GUCD1Q96NT3 240 aa11.26□□□□□ -0.61
SDC2-207ENST00000522911 SLF1Q9BQI6 1058 aa11.26□□□□□ -0.61
SDC2-207ENST00000522911 ZNF287Q9HBT7 754 aa11.26□□□□□ -0.61
SDC2-207ENST00000522911 XPNPEP3Q9NQH7 507 aa11.26□□□□□ -0.61
SDC2-207ENST00000522911 ECHDC1Q9NTX5 307 aa11.26□□□□□ -0.61
SDC2-207ENST00000522911 ATP11BQ9Y2G3 1177 aa11.26□□□□□ -0.61
SDC2-207ENST00000522911 MYH7P12883 1935 aa11.26□□□□□ -0.61
SDC2-207ENST00000522911 BAZ2AQ9UIF9 1905 aaKnown RBP11.26□□□□□ -0.61
SDC2-207ENST00000522911 PLIN4Q96Q06 1357 aa11.26□□□□□ -0.61
SDC2-207ENST00000522911 TRIM43BA6NCK2 446 aa11.25□□□□□ -0.61
SDC2-207ENST00000522911 MOXD2PA6NHM9 499 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms