RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 RPGRQ92834 1020 aaKnown RBP8.91□□□□□ -0.98
SDCBP-210ENST00000522843 BCL2L13Q9BXK5 485 aa8.91□□□□□ -0.98
SDCBP-210ENST00000522843 VPS33BQ9H267 617 aa8.91□□□□□ -0.98
SDCBP-210ENST00000522843 ATP6V0A2Q9Y487 856 aa8.91□□□□□ -0.98
SDCBP-210ENST00000522843 NUP98P52948 1817 aa8.91□□□□□ -0.98
SDCBP-210ENST00000522843 COL3A1P02461 1466 aaPredicted RBP8.9□□□□□ -0.98
SDCBP-210ENST00000522843 ASTN2O75129 1339 aaPredicted RBP8.9□□□□□ -0.98
SDCBP-210ENST00000522843 TBC1D8O95759 1140 aa8.9□□□□□ -0.98
SDCBP-210ENST00000522843 SNRPA1P09661 255 aaKnown RBP8.9□□□□□ -0.98
SDCBP-210ENST00000522843 TXKP42681 527 aa8.9□□□□□ -0.98
SDCBP-210ENST00000522843 NRLP54845 237 aa8.9□□□□□ -0.98
SDCBP-210ENST00000522843 KIAA2012Q0VF49 1180 aa8.9□□□□□ -0.98
SDCBP-210ENST00000522843 DPYDQ12882 1025 aa8.9□□□□□ -0.98
SDCBP-210ENST00000522843 PTK7Q13308 1070 aa8.9□□□□□ -0.98
SDCBP-210ENST00000522843 TBC1D10BQ4KMP7 808 aaPredicted RBP8.9□□□□□ -0.98
SDCBP-210ENST00000522843 KRT26Q7Z3Y9 468 aa8.9□□□□□ -0.98
SDCBP-210ENST00000522843 C2orf69Q8N8R5 385 aa8.9□□□□□ -0.98
SDCBP-210ENST00000522843 RBM17Q96I25 401 aaKnown RBP8.9□□□□□ -0.98
SDCBP-210ENST00000522843 RANBP2P49792 3224 aaKnown RBP8.9□□□□□ -0.99
SDCBP-210ENST00000522843 KIAA0100Q14667 2235 aaKnown RBP8.89□□□□□ -0.99
SDCBP-210ENST00000522843 IBTKQ9P2D0 1353 aaPredicted RBP8.89□□□□□ -0.99
SDCBP-210ENST00000522843 ABCC4O15439 1325 aa8.89□□□□□ -0.99
SDCBP-210ENST00000522843 F8W735 103 aaPredicted RBP8.89□□□□□ -0.99
SDCBP-210ENST00000522843 MICAL2O94851 1124 aa8.89□□□□□ -0.99
SDCBP-210ENST00000522843 NTSR2O95665 410 aa8.89□□□□□ -0.99
SDCBP-210ENST00000522843 EIF2AK2P19525 551 aaKnown RBP8.89□□□□□ -0.99
SDCBP-210ENST00000522843 GPTP24298 496 aa8.89□□□□□ -0.99
SDCBP-210ENST00000522843 CD97P48960 835 aa8.89□□□□□ -0.99
SDCBP-210ENST00000522843 FBXO46Q6PJ61 603 aaPredicted RBP8.89□□□□□ -0.99
SDCBP-210ENST00000522843 TTLL7Q6ZT98 887 aa8.89□□□□□ -0.99
SDCBP-210ENST00000522843 PHACTR3Q96KR7 559 aa8.89□□□□□ -0.99
SDCBP-210ENST00000522843 NYXQ9GZU5 481 aa8.89□□□□□ -0.99
SDCBP-210ENST00000522843 R3HDMLQ9H3Y0 253 aa8.89□□□□□ -0.99
SDCBP-210ENST00000522843 VRTNQ9H8Y1 702 aa8.89□□□□□ -0.99
SDCBP-210ENST00000522843 TLR7Q9NYK1 1049 aaKnown RBP8.89□□□□□ -0.99
SDCBP-210ENST00000522843 CUL9Q8IWT3 2517 aa8.89□□□□□ -0.99
SDCBP-210ENST00000522843 CEP290O15078 2479 aa8.89□□□□□ -0.99
SDCBP-210ENST00000522843 A0A0C4DFX4 3053 aa8.89□□□□□ -0.99
SDCBP-210ENST00000522843 KRTAP4-8A0A0G2JLE6 195 aa8.88□□□□□ -0.99
SDCBP-210ENST00000522843 H7C1D1 291 aa8.88□□□□□ -0.99
SDCBP-210ENST00000522843 PSMD14O00487 310 aa8.88□□□□□ -0.99
SDCBP-210ENST00000522843 DIAPH1O60610 1272 aaKnown RBP8.88□□□□□ -0.99
SDCBP-210ENST00000522843 TNIP1Q15025 636 aa8.88□□□□□ -0.99
SDCBP-210ENST00000522843 MOB2Q70IA6 237 aa8.88□□□□□ -0.99
SDCBP-210ENST00000522843 CDCA5Q96FF9 252 aa8.88□□□□□ -0.99
SDCBP-210ENST00000522843 KCNQ5Q9NR82 932 aa8.88□□□□□ -0.99
SDCBP-210ENST00000522843 HDAC9Q9UKV0 1011 aa8.88□□□□□ -0.99
SDCBP-210ENST00000522843 COL6A3P12111 3177 aa8.87□□□□□ -0.99
SDCBP-210ENST00000522843 MAP3K15Q6ZN16 1313 aa8.87□□□□□ -0.99
SDCBP-210ENST00000522843 PAPPA2Q9BXP8 1791 aa8.87□□□□□ -0.99
SDCBP-210ENST00000522843 ERVV-1B6SEH8 477 aa8.87□□□□□ -0.99
SDCBP-210ENST00000522843 USP17L15C9J2P7 530 aa8.87□□□□□ -0.99
SDCBP-210ENST00000522843 USP17L10C9JJH3 530 aa8.87□□□□□ -0.99
SDCBP-210ENST00000522843 USP17L13C9JLJ4 530 aa8.87□□□□□ -0.99
SDCBP-210ENST00000522843 USP17L12C9JPN9 530 aa8.87□□□□□ -0.99
SDCBP-210ENST00000522843 USP17L11C9JVI0 530 aa8.87□□□□□ -0.99
SDCBP-210ENST00000522843 USP17L21D6R901 530 aa8.87□□□□□ -0.99
SDCBP-210ENST00000522843 USP17L18D6R9N7 530 aa8.87□□□□□ -0.99
SDCBP-210ENST00000522843 USP17L22D6RA61 530 aa8.87□□□□□ -0.99
SDCBP-210ENST00000522843 USP17L17D6RBQ6 530 aa8.87□□□□□ -0.99
SDCBP-210ENST00000522843 USP17L19D6RCP7 530 aa8.87□□□□□ -0.99
SDCBP-210ENST00000522843 USP17L20D6RJB6 530 aa8.87□□□□□ -0.99
SDCBP-210ENST00000522843 USP17L24Q0WX57 530 aa8.87□□□□□ -0.99
SDCBP-210ENST00000522843 DPP8Q6V1X1 898 aaPredicted RBP8.87□□□□□ -0.99
SDCBP-210ENST00000522843 ZNF34Q8IZ26 560 aa8.87□□□□□ -0.99
SDCBP-210ENST00000522843 DPF2Q92785 391 aa8.87□□□□□ -0.99
SDCBP-210ENST00000522843 SRA1Q9HD15 236 aaKnown RBP8.87□□□□□ -0.99
SDCBP-210ENST00000522843 TAF1P21675 1872 aa8.87□□□□□ -0.99
SDCBP-210ENST00000522843 RTL9Q8NET4 1388 aa8.86□□□□□ -0.99
SDCBP-210ENST00000522843 LAMB2P55268 1798 aa8.86□□□□□ -0.99
SDCBP-210ENST00000522843 COL4A1P02462 1669 aa8.86□□□□□ -0.99
SDCBP-210ENST00000522843 FAM196BA6NMK8 535 aa8.86□□□□□ -0.99
SDCBP-210ENST00000522843 IRAK1P51617 712 aa8.86□□□□□ -0.99
SDCBP-210ENST00000522843 C11orf91Q3C1V1 193 aa8.86□□□□□ -0.99
SDCBP-210ENST00000522843 NOM1Q5C9Z4 860 aaKnown RBP8.86□□□□□ -0.99
SDCBP-210ENST00000522843 ANKMY2Q8IV38 441 aa8.86□□□□□ -0.99
SDCBP-210ENST00000522843 SP8Q8IXZ3 490 aa8.86□□□□□ -0.99
SDCBP-210ENST00000522843 NGEFQ8N5V2 710 aa8.86□□□□□ -0.99
SDCBP-210ENST00000522843 IL22RA1Q8N6P7 574 aa8.86□□□□□ -0.99
SDCBP-210ENST00000522843 SUPT20HQ8NEM7 779 aa8.86□□□□□ -0.99
SDCBP-210ENST00000522843 PLD4Q96BZ4 506 aa8.86□□□□□ -0.99
SDCBP-210ENST00000522843 GGA3Q9NZ52 723 aa8.86□□□□□ -0.99
SDCBP-210ENST00000522843 LAMB4A4D0S4 1761 aa8.86□□□□□ -0.99
SDCBP-210ENST00000522843 RBBP6Q7Z6E9 1792 aaKnown RBP8.86□□□□□ -0.99
SDCBP-210ENST00000522843 GSC2O15499 205 aa8.85□□□□□ -0.99
SDCBP-210ENST00000522843 TM4SF4P48230 202 aa8.85□□□□□ -0.99
SDCBP-210ENST00000522843 SLC10A5Q5PT55 438 aa8.85□□□□□ -0.99
SDCBP-210ENST00000522843 GDF6Q6KF10 455 aaPredicted RBP8.85□□□□□ -0.99
SDCBP-210ENST00000522843 MCM10Q7L590 875 aa8.85□□□□□ -0.99
SDCBP-210ENST00000522843 MAP4K3Q8IVH8 894 aa8.85□□□□□ -0.99
SDCBP-210ENST00000522843 DCPSQ96C86 337 aaKnown RBP8.85□□□□□ -0.99
SDCBP-210ENST00000522843 DBNDD1Q9H9R9 158 aa8.85□□□□□ -0.99
SDCBP-210ENST00000522843 RAXQ9Y2V3 346 aa8.85□□□□□ -0.99
SDCBP-210ENST00000522843 LRRC37AA6NMS7 1700 aa8.85□□□□□ -0.99
SDCBP-210ENST00000522843 SCN9AQ15858 1988 aa8.84□□□□□ -0.99
SDCBP-210ENST00000522843 J3QW42 95 aa8.84□□□□□ -0.99
SDCBP-210ENST00000522843 OPLAHO14841 1288 aa8.84□□□□□ -0.99
SDCBP-210ENST00000522843 EN2P19622 333 aaPredicted RBP8.84□□□□□ -0.99
SDCBP-210ENST00000522843 RFX1P22670 979 aa8.84□□□□□ -0.99
SDCBP-210ENST00000522843 DCTN1Q14203 1278 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms