RNA–Protein interactions for RNA: ENST00000522183.1

CASC9-203, Transcript of cancer susceptibility 9, humanhuman

TSL 3

Gene CASC9, Length 833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-203ENST00000522183 PRDM5Q9NQX1 630 aaPredicted RBP15.42■□□□□ 0.06
CASC9-203ENST00000522183 ZNFX1Q9P2E3 1918 aaKnown RBP15.42■□□□□ 0.06
CASC9-203ENST00000522183 PLXNA1Q9UIW2 1896 aa15.42■□□□□ 0.06
CASC9-203ENST00000522183 RAB11FIP3O75154 756 aa15.41■□□□□ 0.06
CASC9-203ENST00000522183 FCER1AP12319 257 aa15.41■□□□□ 0.06
CASC9-203ENST00000522183 ADCYAP1R1P41586 468 aa15.41■□□□□ 0.06
CASC9-203ENST00000522183 CDK8P49336 464 aa15.41■□□□□ 0.06
CASC9-203ENST00000522183 TMEM132BQ14DG7 1078 aa15.41■□□□□ 0.06
CASC9-203ENST00000522183 TRIM60Q495X7 471 aa15.41■□□□□ 0.06
CASC9-203ENST00000522183 C12orf60Q5U649 245 aa15.41■□□□□ 0.06
CASC9-203ENST00000522183 CCDC17Q96LX7 622 aa15.41■□□□□ 0.06
CASC9-203ENST00000522183 FAM161BQ96MY7 647 aa15.41■□□□□ 0.06
CASC9-203ENST00000522183 ZBED9Q6R2W3 1325 aa15.41■□□□□ 0.06
CASC9-203ENST00000522183 USP17L12C9JPN9 530 aa15.4■□□□□ 0.06
CASC9-203ENST00000522183 USP17L21D6R901 530 aa15.4■□□□□ 0.06
CASC9-203ENST00000522183 POTEB2H3BUK9 544 aa15.4■□□□□ 0.06
CASC9-203ENST00000522183 CHGBP05060 677 aa15.4■□□□□ 0.06
CASC9-203ENST00000522183 EEF2P13639 858 aaKnown RBP15.4■□□□□ 0.06
CASC9-203ENST00000522183 ATP5JP18859 108 aa15.4■□□□□ 0.06
CASC9-203ENST00000522183 FAM47AQ5JRC9 791 aa15.4■□□□□ 0.06
CASC9-203ENST00000522183 FAM109BQ6ICB4 259 aaPredicted RBP15.4■□□□□ 0.06
CASC9-203ENST00000522183 C16orf86Q6ZW13 317 aa15.4■□□□□ 0.06
CASC9-203ENST00000522183 MIER1Q8N108 512 aa15.4■□□□□ 0.06
CASC9-203ENST00000522183 FERMT2Q96AC1 680 aa15.4■□□□□ 0.06
CASC9-203ENST00000522183 DDRGK1Q96HY6 314 aa15.4■□□□□ 0.06
CASC9-203ENST00000522183 GUCD1Q96NT3 240 aa15.4■□□□□ 0.06
CASC9-203ENST00000522183 MMP19Q99542 508 aa15.4■□□□□ 0.06
CASC9-203ENST00000522183 HAUS7Q99871 368 aa15.4■□□□□ 0.06
CASC9-203ENST00000522183 ZBTB40Q9NUA8 1239 aa15.4■□□□□ 0.06
CASC9-203ENST00000522183 FBXO28Q9NVF7 368 aa15.4■□□□□ 0.06
CASC9-203ENST00000522183 DDX19BQ9UMR2 479 aa15.4■□□□□ 0.06
CASC9-203ENST00000522183 COG6Q9Y2V7 657 aa15.4■□□□□ 0.06
CASC9-203ENST00000522183 RAD21O60216 631 aa15.39■□□□□ 0.05
CASC9-203ENST00000522183 SLC25A27O95847 323 aa15.39■□□□□ 0.05
CASC9-203ENST00000522183 SNX17Q15036 470 aa15.39■□□□□ 0.05
CASC9-203ENST00000522183 LRRC41Q15345 812 aa15.39■□□□□ 0.05
CASC9-203ENST00000522183 SLC4A4Q9Y6R1 1079 aa15.39■□□□□ 0.05
CASC9-203ENST00000522183 PGK2P07205 417 aa15.38■□□□□ 0.05
CASC9-203ENST00000522183 SHHQ15465 462 aa15.38■□□□□ 0.05
CASC9-203ENST00000522183 C9orf50Q5SZB4 431 aa15.38■□□□□ 0.05
CASC9-203ENST00000522183 ZNF697Q5TEC3 545 aa15.38■□□□□ 0.05
CASC9-203ENST00000522183 BADQ92934 168 aa15.38■□□□□ 0.05
CASC9-203ENST00000522183 KANSL2Q9H9L4 492 aa15.38■□□□□ 0.05
CASC9-203ENST00000522183 GOPCQ9HD26 462 aa15.38■□□□□ 0.05
CASC9-203ENST00000522183 XPNPEP3Q9NQH7 507 aa15.38■□□□□ 0.05
CASC9-203ENST00000522183 PDLIM7Q9NR12 457 aa15.38■□□□□ 0.05
CASC9-203ENST00000522183 ADAMTS5Q9UNA0 930 aa15.38■□□□□ 0.05
CASC9-203ENST00000522183 GREB1LQ9C091 1923 aaPredicted RBP15.38■□□□□ 0.05
CASC9-203ENST00000522183 CDH23Q9H251 3354 aa15.37■□□□□ 0.05
CASC9-203ENST00000522183 VWA5AO00534 786 aa15.37■□□□□ 0.05
CASC9-203ENST00000522183 RARBP10826 455 aa15.37■□□□□ 0.05
CASC9-203ENST00000522183 KCTD2Q14681 263 aa15.37■□□□□ 0.05
CASC9-203ENST00000522183 UBE3CQ15386 1083 aa15.37■□□□□ 0.05
CASC9-203ENST00000522183 FAM83BQ5T0W9 1011 aa15.37■□□□□ 0.05
CASC9-203ENST00000522183 SH3RF1Q7Z6J0 888 aa15.37■□□□□ 0.05
CASC9-203ENST00000522183 RIOX2Q8IUF8 465 aa15.37■□□□□ 0.05
CASC9-203ENST00000522183 NRBP1Q9UHY1 535 aa15.37■□□□□ 0.05
CASC9-203ENST00000522183 PPP1R9AQ9ULJ8 1098 aa15.37■□□□□ 0.05
CASC9-203ENST00000522183 SMCHD1A6NHR9 2005 aa15.37■□□□□ 0.05
CASC9-203ENST00000522183 STAT3P40763 770 aa15.36■□□□□ 0.05
CASC9-203ENST00000522183 TLE2Q04725 743 aa15.36■□□□□ 0.05
CASC9-203ENST00000522183 ZSCAN25Q6NSZ9 544 aa15.36■□□□□ 0.05
CASC9-203ENST00000522183 CTR9Q6PD62 1173 aa15.36■□□□□ 0.05
CASC9-203ENST00000522183 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.36■□□□□ 0.05
CASC9-203ENST00000522183 TINF2Q9BSI4 451 aa15.36■□□□□ 0.05
CASC9-203ENST00000522183 PUS7LQ9H0K6 701 aaKnown RBP15.36■□□□□ 0.05
CASC9-203ENST00000522183 ZNF214Q9UL59 606 aaPredicted RBP15.36■□□□□ 0.05
CASC9-203ENST00000522183 PHF24Q9UPV7 400 aa15.36■□□□□ 0.05
CASC9-203ENST00000522183 ROBO3Q96MS0 1386 aa15.36■□□□□ 0.05
CASC9-203ENST00000522183 PRUNE2Q8WUY3 3088 aa15.35■□□□□ 0.05
CASC9-203ENST00000522183 TRIM43BA6NCK2 446 aa15.35■□□□□ 0.05
CASC9-203ENST00000522183 PGK1P00558 417 aa15.35■□□□□ 0.05
CASC9-203ENST00000522183 TAL1P17542 331 aaPredicted RBP15.35■□□□□ 0.05
CASC9-203ENST00000522183 COPB2P35606 906 aa15.35■□□□□ 0.05
CASC9-203ENST00000522183 ZNF792Q3KQV3 632 aa15.35■□□□□ 0.05
CASC9-203ENST00000522183 C1orf53Q5VUE5 145 aa15.35■□□□□ 0.05
CASC9-203ENST00000522183 RNF180Q86T96 592 aa15.35■□□□□ 0.05
CASC9-203ENST00000522183 REPS2Q8NFH8 660 aa15.35■□□□□ 0.05
CASC9-203ENST00000522183 TRIM43Q96BQ3 446 aaPredicted RBP15.35■□□□□ 0.05
CASC9-203ENST00000522183 LENG1Q96BZ8 264 aaPredicted RBP15.35■□□□□ 0.05
CASC9-203ENST00000522183 NUP88Q99567 741 aaPredicted RBP15.35■□□□□ 0.05
CASC9-203ENST00000522183 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.35■□□□□ 0.05
CASC9-203ENST00000522183 ARPP21Q9UBL0 812 aaPredicted RBP15.35■□□□□ 0.05
CASC9-203ENST00000522183 DIS3Q9Y2L1 958 aaKnown RBP15.35■□□□□ 0.05
CASC9-203ENST00000522183 VCANP13611 3396 aa15.35■□□□□ 0.05
CASC9-203ENST00000522183 STK11IPQ8N1F8 1099 aa15.34■□□□□ 0.05
CASC9-203ENST00000522183 SLF1Q9BQI6 1058 aa15.34■□□□□ 0.05
CASC9-203ENST00000522183 LRRCC1Q9C099 1032 aa15.34■□□□□ 0.05
CASC9-203ENST00000522183 CHMP4BQ9H444 224 aaKnown RBP15.34■□□□□ 0.05
CASC9-203ENST00000522183 CNPY2Q9Y2B0 182 aa15.34■□□□□ 0.05
CASC9-203ENST00000522183 MYH4Q9Y623 1939 aa15.33■□□□□ 0.05
CASC9-203ENST00000522183 A0A1W2PQ45 241 aaPredicted RBP15.33■□□□□ 0.04
CASC9-203ENST00000522183 A0A1W2PQY0 241 aa15.33■□□□□ 0.04
CASC9-203ENST00000522183 SMARCA5O60264 1052 aaPredicted RBP15.33■□□□□ 0.04
CASC9-203ENST00000522183 PQBP1O60828 265 aaKnown RBP15.33■□□□□ 0.04
CASC9-203ENST00000522183 CLTBP09497 229 aa15.33■□□□□ 0.04
CASC9-203ENST00000522183 ZNF865P0CJ78 1059 aaPredicted RBP15.33■□□□□ 0.04
CASC9-203ENST00000522183 AKR1A1P14550 325 aa15.33■□□□□ 0.04
CASC9-203ENST00000522183 CDX2Q99626 313 aaPredicted RBP15.33■□□□□ 0.04
CASC9-203ENST00000522183 COL25A1Q9BXS0 654 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms