RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 CLSTN2Q9H4D0 955 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 KANSL2Q9H9L4 492 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 SPATA31A6Q5VVP1 1343 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 CLRN2A0PK11 232 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 STX10O60499 249 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 ZNF202O95125 648 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 CCNA1P78396 465 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 NAA25Q14CX7 972 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 FAM173BQ6P4H8 233 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 PIM2Q9P1W9 311 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 STIM2Q9P246 746 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 USP17L3A6NCW0 530 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 USP17L4A6NCW7 530 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 TMEM232C9JQI7 657 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 SARNPP82979 210 aaKnown RBP17.98■□□□□ 0.47
USP42-207ENST00000521713 ASPRV1Q53RT3 343 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 USP17L1Q7RTZ2 530 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 COMMD10Q9Y6G5 202 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 IKBKGQ9Y6K9 419 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 C1orf167Q5SNV9 1468 aa17.98■□□□□ 0.47
USP42-207ENST00000521713 MIER3Q7Z3K6 550 aa17.97■□□□□ 0.47
USP42-207ENST00000521713 KRT26Q7Z3Y9 468 aa17.97■□□□□ 0.47
USP42-207ENST00000521713 ZNF354CQ86Y25 554 aa17.97■□□□□ 0.47
USP42-207ENST00000521713 NOSTRINQ8IVI9 506 aa17.97■□□□□ 0.47
USP42-207ENST00000521713 MYCT1Q8N699 235 aa17.97■□□□□ 0.47
USP42-207ENST00000521713 MLXIPQ9HAP2 919 aa17.97■□□□□ 0.47
USP42-207ENST00000521713 CTNND2Q9UQB3 1225 aa17.97■□□□□ 0.47
USP42-207ENST00000521713 HACE1Q8IYU2 909 aa17.97■□□□□ 0.47
USP42-207ENST00000521713 FNBP4Q8N3X1 1017 aaPredicted RBP17.97■□□□□ 0.47
USP42-207ENST00000521713 PPFIBP2Q8ND30 876 aa17.97■□□□□ 0.47
USP42-207ENST00000521713 PAK1Q13153 545 aa17.97■□□□□ 0.47
USP42-207ENST00000521713 AMNQ9BXJ7 453 aa17.97■□□□□ 0.47
USP42-207ENST00000521713 PTCH1Q13635 1447 aa17.97■□□□□ 0.47
USP42-207ENST00000521713 FRMPD2Q68DX3 1309 aaPredicted RBP17.97■□□□□ 0.47
USP42-207ENST00000521713 ZEB2O60315 1214 aa17.97■□□□□ 0.47
USP42-207ENST00000521713 ADD1P35611 737 aaKnown RBP17.97■□□□□ 0.47
USP42-207ENST00000521713 SLFN12Q8IYM2 578 aa17.97■□□□□ 0.47
USP42-207ENST00000521713 TLR7Q9NYK1 1049 aaKnown RBP17.97■□□□□ 0.47
USP42-207ENST00000521713 TESPA1A2RU30 521 aaPredicted RBP17.96■□□□□ 0.47
USP42-207ENST00000521713 SETDB1Q15047 1291 aa17.96■□□□□ 0.47
USP42-207ENST00000521713 CDC37L1Q7L3B6 337 aa17.96■□□□□ 0.47
USP42-207ENST00000521713 SMC6Q96SB8 1091 aa17.96■□□□□ 0.47
USP42-207ENST00000521713 NEK8Q86SG6 692 aa17.96■□□□□ 0.47
USP42-207ENST00000521713 PABPN1LA6NDY0 278 aaKnown RBP17.96■□□□□ 0.47
USP42-207ENST00000521713 RAD17O75943 681 aa17.96■□□□□ 0.47
USP42-207ENST00000521713 RHOXF2BP0C7M4 288 aa17.96■□□□□ 0.47
USP42-207ENST00000521713 RHOXF2Q9BQY4 288 aa17.96■□□□□ 0.47
USP42-207ENST00000521713 SPHKAPQ2M3C7 1700 aa17.96■□□□□ 0.47
USP42-207ENST00000521713 ADCY9O60503 1353 aa17.96■□□□□ 0.47
USP42-207ENST00000521713 TTLL1O95922 423 aa17.96■□□□□ 0.47
USP42-207ENST00000521713 PPM1FP49593 454 aaPredicted RBP17.96■□□□□ 0.47
USP42-207ENST00000521713 ZNF75DP51815 510 aa17.96■□□□□ 0.47
USP42-207ENST00000521713 SNX16P57768 344 aa17.96■□□□□ 0.47
USP42-207ENST00000521713 LMNTD2Q8IXW0 634 aa17.96■□□□□ 0.47
USP42-207ENST00000521713 COL15A1P39059 1388 aa17.95■□□□□ 0.46
USP42-207ENST00000521713 NDUFAB1O14561 156 aa17.95■□□□□ 0.46
USP42-207ENST00000521713 PCDHA1Q9Y5I3 950 aa17.95■□□□□ 0.46
USP42-207ENST00000521713 AKR1B15C9JRZ8 316 aaPredicted RBP17.95■□□□□ 0.46
USP42-207ENST00000521713 CROCCP2Q86T23 111 aa17.95■□□□□ 0.46
USP42-207ENST00000521713 SREK1Q8WXA9 508 aaKnown RBP17.95■□□□□ 0.46
USP42-207ENST00000521713 HLFQ16534 295 aa17.95■□□□□ 0.46
USP42-207ENST00000521713 ARMC9Q7Z3E5 817 aa17.95■□□□□ 0.46
USP42-207ENST00000521713 TSNARE1Q96NA8 513 aa17.95■□□□□ 0.46
USP42-207ENST00000521713 PI4KBQ9UBF8 816 aa17.95■□□□□ 0.46
USP42-207ENST00000521713 CCPG1Q9ULG6 757 aa17.95■□□□□ 0.46
USP42-207ENST00000521713 CCDC117Q8IWD4 279 aaPredicted RBP17.95■□□□□ 0.46
USP42-207ENST00000521713 TPH2Q8IWU9 490 aa17.95■□□□□ 0.46
USP42-207ENST00000521713 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.95■□□□□ 0.46
USP42-207ENST00000521713 NAPGQ99747 312 aaPredicted RBP17.95■□□□□ 0.46
USP42-207ENST00000521713 PCDHA12Q9UN75 941 aa17.95■□□□□ 0.46
USP42-207ENST00000521713 EXOC3O60645 756 aa17.94■□□□□ 0.46
USP42-207ENST00000521713 POLA2Q14181 598 aa17.94■□□□□ 0.46
USP42-207ENST00000521713 POSTNQ15063 836 aa17.94■□□□□ 0.46
USP42-207ENST00000521713 NOX5Q96PH1 765 aa17.94■□□□□ 0.46
USP42-207ENST00000521713 BCL2L12Q9HB09 334 aa17.94■□□□□ 0.46
USP42-207ENST00000521713 ATP2A1O14983 1001 aa17.94■□□□□ 0.46
USP42-207ENST00000521713 CYP19A1P11511 503 aaPredicted RBP17.94■□□□□ 0.46
USP42-207ENST00000521713 ELF2Q15723 593 aa17.94■□□□□ 0.46
USP42-207ENST00000521713 TRIM7Q9C029 511 aa17.94■□□□□ 0.46
USP42-207ENST00000521713 LSG1Q9H089 658 aaKnown RBP17.94■□□□□ 0.46
USP42-207ENST00000521713 LZTFL1Q9NQ48 299 aa17.94■□□□□ 0.46
USP42-207ENST00000521713 MTRF1LQ9UGC7 380 aaKnown RBP17.94■□□□□ 0.46
USP42-207ENST00000521713 SYNRGQ9UMZ2 1314 aa17.94■□□□□ 0.46
USP42-207ENST00000521713 KRT5P13647 590 aa17.94■□□□□ 0.46
USP42-207ENST00000521713 KCTD2Q14681 263 aa17.94■□□□□ 0.46
USP42-207ENST00000521713 KARSQ15046 597 aaKnown RBP17.94■□□□□ 0.46
USP42-207ENST00000521713 MAEAQ7L5Y9 396 aa17.94■□□□□ 0.46
USP42-207ENST00000521713 DYMQ7RTS9 669 aa17.94■□□□□ 0.46
USP42-207ENST00000521713 CFAP57Q96MR6 1250 aa17.94■□□□□ 0.46
USP42-207ENST00000521713 ATP6V0A2Q9Y487 856 aa17.94■□□□□ 0.46
USP42-207ENST00000521713 CARMIL3Q8ND23 1372 aa17.94■□□□□ 0.46
USP42-207ENST00000521713 GOLGA8HP0CJ92 632 aa17.93■□□□□ 0.46
USP42-207ENST00000521713 NCAPG2Q86XI2 1143 aa17.93■□□□□ 0.46
USP42-207ENST00000521713 NUP58Q9BVL2 599 aa17.93■□□□□ 0.46
USP42-207ENST00000521713 MRPL44Q9H9J2 332 aaKnown RBP17.93■□□□□ 0.46
USP42-207ENST00000521713 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.93■□□□□ 0.46
USP42-207ENST00000521713 PLCB3Q01970 1234 aa17.93■□□□□ 0.46
USP42-207ENST00000521713 SEPT6Q14141 434 aa17.93■□□□□ 0.46
USP42-207ENST00000521713 VPS72Q15906 364 aa17.93■□□□□ 0.46
USP42-207ENST00000521713 PRR16Q569H4 304 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms