RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 SLC3A2P08195 630 aaKnown RBP12.8□□□□□ -0.36
PVT1-209ENST00000520913 ERCC3P19447 782 aa12.8□□□□□ -0.36
PVT1-209ENST00000520913 ADORA2AP29274 412 aa12.8□□□□□ -0.36
PVT1-209ENST00000520913 PDE1AP54750 535 aa12.8□□□□□ -0.36
PVT1-209ENST00000520913 PDE4BQ07343 736 aa12.8□□□□□ -0.36
PVT1-209ENST00000520913 SAMD1Q6SPF0 538 aaPredicted RBP12.8□□□□□ -0.36
PVT1-209ENST00000520913 ZNF444Q8N0Y2 327 aaPredicted RBP12.8□□□□□ -0.36
PVT1-209ENST00000520913 DIS3LQ8TF46 1054 aaKnown RBP12.8□□□□□ -0.36
PVT1-209ENST00000520913 EVI5LQ96CN4 794 aa12.8□□□□□ -0.36
PVT1-209ENST00000520913 MROH8Q9H579 483 aa12.8□□□□□ -0.36
PVT1-209ENST00000520913 LTBP2Q14767 1821 aa12.79□□□□□ -0.36
PVT1-209ENST00000520913 IGKV6D-41A0A0C4DH26 115 aa12.79□□□□□ -0.36
PVT1-209ENST00000520913 EVI5O60447 810 aa12.79□□□□□ -0.36
PVT1-209ENST00000520913 SLC25A27O95847 323 aa12.79□□□□□ -0.36
PVT1-209ENST00000520913 CCND3P30281 292 aaPredicted RBP12.79□□□□□ -0.36
PVT1-209ENST00000520913 FAM83BQ5T0W9 1011 aa12.79□□□□□ -0.36
PVT1-209ENST00000520913 DPP9Q86TI2 863 aa12.79□□□□□ -0.36
PVT1-209ENST00000520913 NCAPG2Q86XI2 1143 aa12.79□□□□□ -0.36
PVT1-209ENST00000520913 ABRAQ8N0Z2 381 aa12.79□□□□□ -0.36
PVT1-209ENST00000520913 NPLOC4Q8TAT6 608 aa12.79□□□□□ -0.36
PVT1-209ENST00000520913 NBPF3Q9H094 633 aa12.79□□□□□ -0.36
PVT1-209ENST00000520913 C11orf49Q9H6J7 331 aa12.79□□□□□ -0.36
PVT1-209ENST00000520913 FBXO28Q9NVF7 368 aa12.79□□□□□ -0.36
PVT1-209ENST00000520913 SLC5A4Q9NY91 659 aa12.79□□□□□ -0.36
PVT1-209ENST00000520913 FLRT1Q9NZU1 646 aa12.79□□□□□ -0.36
PVT1-209ENST00000520913 PPP1R9AQ9ULJ8 1098 aa12.79□□□□□ -0.36
PVT1-209ENST00000520913 SYNPO2Q9UMS6 1093 aa12.79□□□□□ -0.36
PVT1-209ENST00000520913 MSCO60682 206 aa12.78□□□□□ -0.36
PVT1-209ENST00000520913 PRDM1O75626 825 aa12.78□□□□□ -0.36
PVT1-209ENST00000520913 COPB2P35606 906 aa12.78□□□□□ -0.36
PVT1-209ENST00000520913 PPARAQ07869 468 aa12.78□□□□□ -0.36
PVT1-209ENST00000520913 TMEM132BQ14DG7 1078 aa12.78□□□□□ -0.36
PVT1-209ENST00000520913 OLFML2BQ68BL8 750 aa12.78□□□□□ -0.36
PVT1-209ENST00000520913 CCDC129Q6ZRS4 1044 aa12.78□□□□□ -0.36
PVT1-209ENST00000520913 TICAM2Q86XR7 235 aa12.78□□□□□ -0.36
PVT1-209ENST00000520913 SMC5Q8IY18 1101 aa12.78□□□□□ -0.36
PVT1-209ENST00000520913 CEP95Q96GE4 821 aa12.78□□□□□ -0.36
PVT1-209ENST00000520913 LNPKQ9C0E8 428 aa12.78□□□□□ -0.36
PVT1-209ENST00000520913 RWDD1Q9H446 243 aaPredicted RBP12.78□□□□□ -0.36
PVT1-209ENST00000520913 ADAMTS5Q9UNA0 930 aa12.78□□□□□ -0.36
PVT1-209ENST00000520913 COLQQ9Y215 455 aaPredicted RBP12.78□□□□□ -0.36
PVT1-209ENST00000520913 TRIOBPQ9H2D6 2365 aa12.78□□□□□ -0.36
PVT1-209ENST00000520913 F5H6K3 240 aa12.77□□□□□ -0.37
PVT1-209ENST00000520913 VWA5AO00534 786 aa12.77□□□□□ -0.37
PVT1-209ENST00000520913 TTLL1O95922 423 aa12.77□□□□□ -0.37
PVT1-209ENST00000520913 NDUFB10O96000 172 aa12.77□□□□□ -0.37
PVT1-209ENST00000520913 TSPY3P0CV98 308 aa12.77□□□□□ -0.37
PVT1-209ENST00000520913 TSPY8P0CW00 308 aa12.77□□□□□ -0.37
PVT1-209ENST00000520913 FCER1AP12319 257 aa12.77□□□□□ -0.37
PVT1-209ENST00000520913 CYBAP13498 195 aa12.77□□□□□ -0.37
PVT1-209ENST00000520913 MNX1P50219 401 aaPredicted RBP12.77□□□□□ -0.37
PVT1-209ENST00000520913 KLRC3Q07444 240 aa12.77□□□□□ -0.37
PVT1-209ENST00000520913 LHX8Q68G74 356 aa12.77□□□□□ -0.37
PVT1-209ENST00000520913 CHRDL2Q6WN34 429 aa12.77□□□□□ -0.37
PVT1-209ENST00000520913 RIOX2Q8IUF8 465 aa12.77□□□□□ -0.37
PVT1-209ENST00000520913 NUP88Q99567 741 aaPredicted RBP12.77□□□□□ -0.37
PVT1-209ENST00000520913 SLF1Q9BQI6 1058 aa12.77□□□□□ -0.37
PVT1-209ENST00000520913 HELLSQ9NRZ9 838 aa12.77□□□□□ -0.37
PVT1-209ENST00000520913 MTMR4Q9NYA4 1195 aa12.77□□□□□ -0.37
PVT1-209ENST00000520913 CLIP2Q9UDT6 1046 aa12.77□□□□□ -0.37
PVT1-209ENST00000520913 ZNF214Q9UL59 606 aaPredicted RBP12.77□□□□□ -0.37
PVT1-209ENST00000520913 LCTP09848 1927 aa12.77□□□□□ -0.37
PVT1-209ENST00000520913 MYH6P13533 1939 aa12.77□□□□□ -0.37
PVT1-209ENST00000520913 SMCHD1A6NHR9 2005 aa12.77□□□□□ -0.37
PVT1-209ENST00000520913 FOXP2O15409 715 aa12.76□□□□□ -0.37
PVT1-209ENST00000520913 CNGA1P29973 690 aa12.76□□□□□ -0.37
PVT1-209ENST00000520913 CYP2C19P33261 490 aa12.76□□□□□ -0.37
PVT1-209ENST00000520913 PPP4R3BQ5MIZ7 849 aa12.76□□□□□ -0.37
PVT1-209ENST00000520913 LRRC47Q8N1G4 583 aaKnown RBP12.76□□□□□ -0.37
PVT1-209ENST00000520913 GMCL1P1Q8NEA9 526 aa12.76□□□□□ -0.37
PVT1-209ENST00000520913 REPS2Q8NFH8 660 aa12.76□□□□□ -0.37
PVT1-209ENST00000520913 NEDD1Q8NHV4 660 aa12.76□□□□□ -0.37
PVT1-209ENST00000520913 MKL1Q969V6 931 aa12.76□□□□□ -0.37
PVT1-209ENST00000520913 MMP19Q99542 508 aa12.76□□□□□ -0.37
PVT1-209ENST00000520913 DDX20Q9UHI6 824 aaKnown RBP12.76□□□□□ -0.37
PVT1-209ENST00000520913 PFASO15067 1338 aa12.76□□□□□ -0.37
PVT1-209ENST00000520913 ZMYM6O95789 1325 aa12.76□□□□□ -0.37
PVT1-209ENST00000520913 SZT2Q5T011 3432 aa12.75□□□□□ -0.37
PVT1-209ENST00000520913 A0A0D9SFI3 127 aa12.75□□□□□ -0.37
PVT1-209ENST00000520913 TSPY2A6NKD2 308 aa12.75□□□□□ -0.37
PVT1-209ENST00000520913 TRIM6-TRIM34B2RNG4 842 aa12.75□□□□□ -0.37
PVT1-209ENST00000520913 IGHA2P01877 340 aa12.75□□□□□ -0.37
PVT1-209ENST00000520913 STAT3P40763 770 aa12.75□□□□□ -0.37
PVT1-209ENST00000520913 KCTD2Q14681 263 aa12.75□□□□□ -0.37
PVT1-209ENST00000520913 FAM47AQ5JRC9 791 aa12.75□□□□□ -0.37
PVT1-209ENST00000520913 C7orf61Q8IZ16 206 aa12.75□□□□□ -0.37
PVT1-209ENST00000520913 PRPF38AQ8NAV1 312 aaKnown RBP12.75□□□□□ -0.37
PVT1-209ENST00000520913 MAML3Q96JK9 1138 aa12.75□□□□□ -0.37
PVT1-209ENST00000520913 TEX13BQ9BXU2 312 aa12.75□□□□□ -0.37
PVT1-209ENST00000520913 ANAPC4Q9UJX5 808 aa12.75□□□□□ -0.37
PVT1-209ENST00000520913 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.75□□□□□ -0.37
PVT1-209ENST00000520913 CTDP1Q9Y5B0 961 aaPredicted RBP12.75□□□□□ -0.37
PVT1-209ENST00000520913 CCDC171Q6TFL3 1326 aa12.74□□□□□ -0.37
PVT1-209ENST00000520913 COBLO75128 1261 aa12.74□□□□□ -0.37
PVT1-209ENST00000520913 COL6A1P12109 1028 aa12.74□□□□□ -0.37
PVT1-209ENST00000520913 FXR1P51114 621 aaKnown RBP eCLIP12.74□□□□□ -0.37
PVT1-209ENST00000520913 TFAP4Q01664 338 aa12.74□□□□□ -0.37
PVT1-209ENST00000520913 CTDSPL2Q05D32 466 aa12.74□□□□□ -0.37
PVT1-209ENST00000520913 MCMDC2Q4G0Z9 681 aa12.74□□□□□ -0.37
PVT1-209ENST00000520913 VPS53Q5VIR6 699 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms