RNA–Protein interactions for RNA: ENST00000519414.5

CHMP7-204, Transcript of charged multivesicular body protein 7, humanhuman

TSL 3

Gene CHMP7, Length 914 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-204ENST00000519414 NRBP1Q9UHY1 535 aa23.18■■□□□ 1.3
CHMP7-204ENST00000519414 ADAMTS5Q9UNA0 930 aa23.18■■□□□ 1.3
CHMP7-204ENST00000519414 EEF2P13639 858 aaKnown RBP23.17■■□□□ 1.3
CHMP7-204ENST00000519414 SNX17Q15036 470 aa23.17■■□□□ 1.3
CHMP7-204ENST00000519414 SAMD1Q6SPF0 538 aaPredicted RBP23.17■■□□□ 1.3
CHMP7-204ENST00000519414 CHMP4BQ9H444 224 aaKnown RBP23.17■■□□□ 1.3
CHMP7-204ENST00000519414 COG6Q9Y2V7 657 aa23.17■■□□□ 1.3
CHMP7-204ENST00000519414 RLFQ13129 1914 aa23.17■■□□□ 1.3
CHMP7-204ENST00000519414 SMIM22K7EJ46 135 aa23.16■■□□□ 1.3
CHMP7-204ENST00000519414 MYCNP04198 464 aaPredicted RBP23.16■■□□□ 1.3
CHMP7-204ENST00000519414 ADCYAP1R1P41586 468 aa23.16■■□□□ 1.3
CHMP7-204ENST00000519414 LRRC41Q15345 812 aa23.16■■□□□ 1.3
CHMP7-204ENST00000519414 RIOX2Q8IUF8 465 aa23.16■■□□□ 1.3
CHMP7-204ENST00000519414 SLC4A4Q9Y6R1 1079 aa23.16■■□□□ 1.3
CHMP7-204ENST00000519414 TRIM60Q495X7 471 aa23.15■■□□□ 1.3
CHMP7-204ENST00000519414 FAM47AQ5JRC9 791 aa23.15■■□□□ 1.3
CHMP7-204ENST00000519414 C1orf53Q5VUE5 145 aa23.15■■□□□ 1.3
CHMP7-204ENST00000519414 ZSCAN25Q6NSZ9 544 aa23.15■■□□□ 1.3
CHMP7-204ENST00000519414 MMP19Q99542 508 aa23.15■■□□□ 1.3
CHMP7-204ENST00000519414 GOPCQ9HD26 462 aa23.15■■□□□ 1.3
CHMP7-204ENST00000519414 PRDM5Q9NQX1 630 aaPredicted RBP23.15■■□□□ 1.3
CHMP7-204ENST00000519414 CHGBP05060 677 aa23.14■■□□□ 1.29
CHMP7-204ENST00000519414 KCTD2Q14681 263 aa23.14■■□□□ 1.29
CHMP7-204ENST00000519414 CTR9Q6PD62 1173 aa23.14■■□□□ 1.29
CHMP7-204ENST00000519414 GUCD1Q96NT3 240 aa23.14■■□□□ 1.29
CHMP7-204ENST00000519414 FBXO28Q9NVF7 368 aa23.14■■□□□ 1.29
CHMP7-204ENST00000519414 DIS3Q9Y2L1 958 aaKnown RBP23.14■■□□□ 1.29
CHMP7-204ENST00000519414 VWA5AO00534 786 aa23.13■■□□□ 1.29
CHMP7-204ENST00000519414 COPB2P35606 906 aa23.13■■□□□ 1.29
CHMP7-204ENST00000519414 STAT3P40763 770 aa23.13■■□□□ 1.29
CHMP7-204ENST00000519414 FERMT2Q96AC1 680 aa23.13■■□□□ 1.29
CHMP7-204ENST00000519414 TINF2Q9BSI4 451 aa23.13■■□□□ 1.29
CHMP7-204ENST00000519414 PDLIM7Q9NR12 457 aa23.13■■□□□ 1.29
CHMP7-204ENST00000519414 PPP1R9AQ9ULJ8 1098 aa23.13■■□□□ 1.29
CHMP7-204ENST00000519414 PGK2P07205 417 aa23.12■■□□□ 1.29
CHMP7-204ENST00000519414 RARBP10826 455 aa23.12■■□□□ 1.29
CHMP7-204ENST00000519414 SHHQ15465 462 aa23.12■■□□□ 1.29
CHMP7-204ENST00000519414 ZNF792Q3KQV3 632 aa23.12■■□□□ 1.29
CHMP7-204ENST00000519414 ZNF697Q5TEC3 545 aa23.12■■□□□ 1.29
CHMP7-204ENST00000519414 DNAH12Q6ZR08 3092 aa23.12■■□□□ 1.29
CHMP7-204ENST00000519414 BADQ92934 168 aa23.12■■□□□ 1.29
CHMP7-204ENST00000519414 PUS7LQ9H0K6 701 aaKnown RBP23.12■■□□□ 1.29
CHMP7-204ENST00000519414 XPNPEP3Q9NQH7 507 aa23.12■■□□□ 1.29
CHMP7-204ENST00000519414 ARPP21Q9UBL0 812 aaPredicted RBP23.12■■□□□ 1.29
CHMP7-204ENST00000519414 PHF24Q9UPV7 400 aa23.12■■□□□ 1.29
CHMP7-204ENST00000519414 A0A0C4DFX4 3053 aa23.11■■□□□ 1.29
CHMP7-204ENST00000519414 FAM83BQ5T0W9 1011 aa23.11■■□□□ 1.29
CHMP7-204ENST00000519414 C20orf194Q5TEA3 1177 aa23.11■■□□□ 1.29
CHMP7-204ENST00000519414 FAM161BQ96MY7 647 aa23.11■■□□□ 1.29
CHMP7-204ENST00000519414 ZNF214Q9UL59 606 aaPredicted RBP23.11■■□□□ 1.29
CHMP7-204ENST00000519414 TRIM43BA6NCK2 446 aa23.1■■□□□ 1.29
CHMP7-204ENST00000519414 RAD21O60216 631 aa23.1■■□□□ 1.29
CHMP7-204ENST00000519414 C9orf50Q5SZB4 431 aa23.1■■□□□ 1.29
CHMP7-204ENST00000519414 RNF180Q86T96 592 aa23.1■■□□□ 1.29
CHMP7-204ENST00000519414 REPS2Q8NFH8 660 aa23.1■■□□□ 1.29
CHMP7-204ENST00000519414 TRIM43Q96BQ3 446 aaPredicted RBP23.1■■□□□ 1.29
CHMP7-204ENST00000519414 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.1■■□□□ 1.29
CHMP7-204ENST00000519414 LRRCC1Q9C099 1032 aa23.1■■□□□ 1.29
CHMP7-204ENST00000519414 TLE2Q04725 743 aa23.09■■□□□ 1.29
CHMP7-204ENST00000519414 SH3RF1Q7Z6J0 888 aa23.09■■□□□ 1.29
CHMP7-204ENST00000519414 TACC3Q9Y6A5 838 aa23.09■■□□□ 1.29
CHMP7-204ENST00000519414 ROBO3Q96MS0 1386 aa23.09■■□□□ 1.29
CHMP7-204ENST00000519414 PGK1P00558 417 aa23.08■■□□□ 1.29
CHMP7-204ENST00000519414 ZNF865P0CJ78 1059 aaPredicted RBP23.08■■□□□ 1.29
CHMP7-204ENST00000519414 AKR1A1P14550 325 aa23.08■■□□□ 1.29
CHMP7-204ENST00000519414 TAL1P17542 331 aaPredicted RBP23.08■■□□□ 1.29
CHMP7-204ENST00000519414 SBK1Q52WX2 424 aa23.08■■□□□ 1.29
CHMP7-204ENST00000519414 STRBPQ96SI9 672 aaKnown RBP23.08■■□□□ 1.29
CHMP7-204ENST00000519414 SLF1Q9BQI6 1058 aa23.08■■□□□ 1.29
CHMP7-204ENST00000519414 CNPY2Q9Y2B0 182 aa23.08■■□□□ 1.29
CHMP7-204ENST00000519414 LTBP2Q14767 1821 aa23.08■■□□□ 1.28
CHMP7-204ENST00000519414 GIMAP6Q6P9H5 292 aa23.07■■□□□ 1.28
CHMP7-204ENST00000519414 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.07■■□□□ 1.28
CHMP7-204ENST00000519414 MSL3Q8N5Y2 521 aaKnown RBP23.07■■□□□ 1.28
CHMP7-204ENST00000519414 TEX13BQ9BXU2 312 aa23.07■■□□□ 1.28
CHMP7-204ENST00000519414 NYAP2Q9P242 653 aa23.07■■□□□ 1.28
CHMP7-204ENST00000519414 BAZ2AQ9UIF9 1905 aaKnown RBP23.06■■□□□ 1.28
CHMP7-204ENST00000519414 CLTBP09497 229 aa23.06■■□□□ 1.28
CHMP7-204ENST00000519414 RASA1P20936 1047 aa23.06■■□□□ 1.28
CHMP7-204ENST00000519414 SMAD3P84022 425 aaKnown RBP23.06■■□□□ 1.28
CHMP7-204ENST00000519414 MKNK2Q9HBH9 465 aa23.06■■□□□ 1.28
CHMP7-204ENST00000519414 ECHDC1Q9NTX5 307 aa23.06■■□□□ 1.28
CHMP7-204ENST00000519414 MYH8P13535 1937 aa23.06■■□□□ 1.28
CHMP7-204ENST00000519414 A0A1W2PQ45 241 aaPredicted RBP23.05■■□□□ 1.28
CHMP7-204ENST00000519414 A0A1W2PQY0 241 aa23.05■■□□□ 1.28
CHMP7-204ENST00000519414 GSG1L2A8MUP6 293 aa23.05■■□□□ 1.28
CHMP7-204ENST00000519414 NUP88Q99567 741 aaPredicted RBP23.05■■□□□ 1.28
CHMP7-204ENST00000519414 CDX2Q99626 313 aaPredicted RBP23.05■■□□□ 1.28
CHMP7-204ENST00000519414 TSEN34Q9BSV6 310 aaKnown RBP23.05■■□□□ 1.28
CHMP7-204ENST00000519414 SEMA6BQ9H3T3 888 aa23.05■■□□□ 1.28
CHMP7-204ENST00000519414 SUPT16HQ9Y5B9 1047 aaKnown RBP23.05■■□□□ 1.28
CHMP7-204ENST00000519414 PARP14Q460N5 1801 aa23.05■■□□□ 1.28
CHMP7-204ENST00000519414 F5H6K3 240 aa23.04■■□□□ 1.28
CHMP7-204ENST00000519414 SMARCA5O60264 1052 aaPredicted RBP23.04■■□□□ 1.28
CHMP7-204ENST00000519414 KLRC3Q07444 240 aa23.04■■□□□ 1.28
CHMP7-204ENST00000519414 SNRNP48Q6IEG0 339 aaKnown RBP23.04■■□□□ 1.28
CHMP7-204ENST00000519414 PRPF38AQ8NAV1 312 aaKnown RBP23.04■■□□□ 1.28
CHMP7-204ENST00000519414 SYNGAP1Q96PV0 1343 aa23.04■■□□□ 1.28
CHMP7-204ENST00000519414 CUL9Q8IWT3 2517 aa23.04■■□□□ 1.28
CHMP7-204ENST00000519414 MINDY4BA8MYZ0 360 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms