RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 ADAM21Q9UKJ8 722 aa11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 IQSEC3Q9UPP2 1182 aaPredicted RBP11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 MAP2K7O14733 419 aa11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 POLR3GO15318 223 aaPredicted RBP11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 CCP110O43303 1012 aa11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 PRPF3O43395 683 aaKnown RBP11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 BMP15O95972 392 aa11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 IVLP07476 585 aa11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 ATP1A3P13637 1013 aa11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 SARSP49591 514 aaKnown RBP11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 FUT2Q10981 343 aa11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 NR5A1Q13285 461 aa11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 POSTNQ15063 836 aa11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 ISM2Q6H9L7 571 aa11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 FBXO33Q7Z6M2 555 aa11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 IQCA1Q86XH1 822 aa11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 ENAHQ8N8S7 591 aaPredicted RBP11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 MLKLQ8NB16 471 aa11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 FAM84BQ96KN1 310 aaPredicted RBP11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 FUT8Q9BYC5 575 aa11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 TAOK2Q9UL54 1235 aa11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 PCDHB6Q9Y5E3 794 aa11.47□□□□□ -0.57
SH2D4A-204ENST00000519207 DDAH1O94760 285 aa11.46□□□□□ -0.58
SH2D4A-204ENST00000519207 SERPINC1P01008 464 aa11.46□□□□□ -0.58
SH2D4A-204ENST00000519207 TGFB2P61812 414 aa11.46□□□□□ -0.58
SH2D4A-204ENST00000519207 ETF1P62495 437 aaKnown RBP11.46□□□□□ -0.58
SH2D4A-204ENST00000519207 TTC31Q49AM3 519 aaPredicted RBP11.46□□□□□ -0.58
SH2D4A-204ENST00000519207 CT47A1Q5JQC4 288 aaPredicted RBP11.46□□□□□ -0.58
SH2D4A-204ENST00000519207 IFIT1BQ5T764 474 aaKnown RBP11.46□□□□□ -0.58
SH2D4A-204ENST00000519207 TRIM65Q6PJ69 517 aa11.46□□□□□ -0.58
SH2D4A-204ENST00000519207 C3orf67Q6ZVT6 689 aa11.46□□□□□ -0.58
SH2D4A-204ENST00000519207 CCDC82Q8N4S0 544 aa11.46□□□□□ -0.58
SH2D4A-204ENST00000519207 CCDC34Q96HJ3 373 aa11.46□□□□□ -0.58
SH2D4A-204ENST00000519207 PHF20Q9BVI0 1012 aa11.46□□□□□ -0.58
SH2D4A-204ENST00000519207 TMX1Q9H3N1 280 aa11.46□□□□□ -0.58
SH2D4A-204ENST00000519207 ZCCHC17Q9NP64 241 aaKnown RBP11.46□□□□□ -0.58
SH2D4A-204ENST00000519207 TRMT1Q9NXH9 659 aaKnown RBP11.46□□□□□ -0.58
SH2D4A-204ENST00000519207 TAF1P21675 1872 aa11.46□□□□□ -0.58
SH2D4A-204ENST00000519207 TRIM75PA6NK02 468 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 FANCGO15287 622 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 POLR2DO15514 142 aaKnown RBP11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 ORC4O43929 436 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 CCDC172P0C7W6 258 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 BMP6P22004 513 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 CORO7P57737 925 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 PKN1Q16512 942 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 NOM1Q5C9Z4 860 aaKnown RBP11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 VSTM4Q8IW00 320 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 CMTR1Q8N1G2 835 aaKnown RBP11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 SPATA20Q8TB22 786 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 OXER1Q8TDS5 423 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 ZNF526Q8TF50 670 aaPredicted RBP11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 UBXN4Q92575 508 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 NYXQ9GZU5 481 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 GPBP1L1Q9HC44 474 aaPredicted RBP11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 CABP5Q9NP86 173 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 AATFQ9NY61 560 aaKnown RBP eCLIP11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 MAN1B1Q9UKM7 699 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 CEP83Q9Y592 693 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 MYH13Q9UKX3 1938 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 ACTN4O43707 911 aaKnown RBP11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 KRT2P35908 639 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 NT5C2P49902 561 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 GRIN1Q05586 938 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 TROAPQ12815 778 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 MORC3Q14149 939 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 CFAP100Q494V2 611 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 SPECC1Q5M775 1068 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 RSRC2Q7L4I2 434 aaKnown RBP11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 GPR161Q8N6U8 529 aaKnown RBP11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 ENOX1Q8TC92 643 aaKnown RBP11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 CEP89Q96ST8 783 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 FANCLQ9NW38 375 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 DONSONQ9NYP3 566 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 SRP68Q9UHB9 627 aaKnown RBP11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 SERTAD1Q9UHV2 236 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 DNAI1Q9UI46 699 aa11.45□□□□□ -0.58
SH2D4A-204ENST00000519207 SEC31AO94979 1220 aaKnown RBP11.44□□□□□ -0.58
SH2D4A-204ENST00000519207 DYNLL1P63167 89 aaKnown RBP11.44□□□□□ -0.58
SH2D4A-204ENST00000519207 FCHSD1Q86WN1 690 aa11.44□□□□□ -0.58
SH2D4A-204ENST00000519207 ZNF384Q8TF68 577 aa11.44□□□□□ -0.58
SH2D4A-204ENST00000519207 FERMT2Q96AC1 680 aa11.44□□□□□ -0.58
SH2D4A-204ENST00000519207 NSUN4Q96CB9 384 aaKnown RBP11.44□□□□□ -0.58
SH2D4A-204ENST00000519207 ANKRD2Q9GZV1 360 aa11.44□□□□□ -0.58
SH2D4A-204ENST00000519207 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.44□□□□□ -0.58
SH2D4A-204ENST00000519207 PARP3Q9Y6F1 533 aa11.44□□□□□ -0.58
SH2D4A-204ENST00000519207 NPHP1O15259 732 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 FOXN1O15353 648 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 PRR29P0C7W0 189 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 DPEP1P16444 411 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 ZNF18P17022 549 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 ERCC5P28715 1186 aaPredicted RBP11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 RPS8P62241 208 aaKnown RBP11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 PDE4BQ07343 736 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 TMTC3Q6ZXV5 915 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 DPF2Q92785 391 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 CELF1Q92879 486 aaKnown RBP11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 SHISA4Q96DD7 197 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 CRNKL1Q9BZJ0 848 aaKnown RBP11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 CSRNP2Q9H175 543 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms