RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 TMEM39BQ9GZU3 492 aa26.9■■□□□ 1.9
SLIT3-204ENST00000518140 VAT1LQ9HCJ6 419 aa26.9■■□□□ 1.9
SLIT3-204ENST00000518140 FZD9O00144 591 aa26.89■■□□□ 1.9
SLIT3-204ENST00000518140 KRT2P35908 639 aa26.89■■□□□ 1.9
SLIT3-204ENST00000518140 LZTS2Q9BRK4 669 aa26.89■■□□□ 1.9
SLIT3-204ENST00000518140 GJA3Q9Y6H8 435 aa26.89■■□□□ 1.9
SLIT3-204ENST00000518140 CAMK4Q16566 473 aa26.89■■□□□ 1.89
SLIT3-204ENST00000518140 KCNG4Q8TDN1 519 aa26.89■■□□□ 1.89
SLIT3-204ENST00000518140 SNHG28P0DPA3 235 aa26.88■■□□□ 1.89
SLIT3-204ENST00000518140 EEF2P13639 858 aaKnown RBP26.88■■□□□ 1.89
SLIT3-204ENST00000518140 CLCN1P35523 988 aa26.88■■□□□ 1.89
SLIT3-204ENST00000518140 GMPSP49915 693 aaPredicted RBP26.88■■□□□ 1.89
SLIT3-204ENST00000518140 NLRP5P59047 1200 aa26.88■■□□□ 1.89
SLIT3-204ENST00000518140 SPZ1Q9BXG8 430 aa26.88■■□□□ 1.89
SLIT3-204ENST00000518140 GPCPD1Q9NPB8 672 aa26.88■■□□□ 1.89
SLIT3-204ENST00000518140 GREB1LQ9C091 1923 aaPredicted RBP26.88■■□□□ 1.89
SLIT3-204ENST00000518140 WWC2Q6AWC2 1192 aa26.88■■□□□ 1.89
SLIT3-204ENST00000518140 TNFRSF25Q93038 417 aa26.88■■□□□ 1.89
SLIT3-204ENST00000518140 FHDC1Q9C0D6 1143 aaPredicted RBP26.88■■□□□ 1.89
SLIT3-204ENST00000518140 RBSNQ9H1K0 784 aa26.88■■□□□ 1.89
SLIT3-204ENST00000518140 COL2A1P02458 1487 aaPredicted RBP26.87■■□□□ 1.89
SLIT3-204ENST00000518140 ATP2B1P20020 1258 aa26.87■■□□□ 1.89
SLIT3-204ENST00000518140 ZNF280AP59817 542 aaPredicted RBP26.87■■□□□ 1.89
SLIT3-204ENST00000518140 ABCB5Q2M3G0 1257 aa26.87■■□□□ 1.89
SLIT3-204ENST00000518140 ADALQ6DHV7 355 aa26.87■■□□□ 1.89
SLIT3-204ENST00000518140 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.87■■□□□ 1.89
SLIT3-204ENST00000518140 PCDHB6Q9Y5E3 794 aa26.87■■□□□ 1.89
SLIT3-204ENST00000518140 AXDND1Q5T1B0 1012 aaPredicted RBP26.86■■□□□ 1.89
SLIT3-204ENST00000518140 GH2P01242 217 aa26.86■■□□□ 1.89
SLIT3-204ENST00000518140 FKBP1CQ5VVH2 108 aa26.86■■□□□ 1.89
SLIT3-204ENST00000518140 TTBK2Q6IQ55 1244 aa26.86■■□□□ 1.89
SLIT3-204ENST00000518140 SAMD7Q7Z3H4 446 aa26.86■■□□□ 1.89
SLIT3-204ENST00000518140 HEATR3Q7Z4Q2 680 aa26.86■■□□□ 1.89
SLIT3-204ENST00000518140 HOMER1Q86YM7 354 aa26.86■■□□□ 1.89
SLIT3-204ENST00000518140 FSIP1Q8NA03 581 aa26.86■■□□□ 1.89
SLIT3-204ENST00000518140 KANSL2Q9H9L4 492 aa26.86■■□□□ 1.89
SLIT3-204ENST00000518140 ZNF541Q9H0D2 1346 aa26.86■■□□□ 1.89
SLIT3-204ENST00000518140 SNW1Q13573 536 aaKnown RBP26.85■■□□□ 1.89
SLIT3-204ENST00000518140 ARHGAP27Q6ZUM4 889 aa26.85■■□□□ 1.89
SLIT3-204ENST00000518140 PIGSQ96S52 555 aa26.85■■□□□ 1.89
SLIT3-204ENST00000518140 PGAP2Q9UHJ9 254 aa26.85■■□□□ 1.89
SLIT3-204ENST00000518140 WNT7AO00755 349 aa26.85■■□□□ 1.89
SLIT3-204ENST00000518140 ZNF543Q08ER8 600 aa26.85■■□□□ 1.89
SLIT3-204ENST00000518140 MICALL2Q8IY33 904 aa26.85■■□□□ 1.89
SLIT3-204ENST00000518140 MKL1Q969V6 931 aa26.85■■□□□ 1.89
SLIT3-204ENST00000518140 ASTN2O75129 1339 aaPredicted RBP26.84■■□□□ 1.89
SLIT3-204ENST00000518140 A0A1B0GVL5 298 aa26.84■■□□□ 1.89
SLIT3-204ENST00000518140 STXBP3O00186 592 aa26.84■■□□□ 1.89
SLIT3-204ENST00000518140 MYO1BO43795 1136 aa26.84■■□□□ 1.89
SLIT3-204ENST00000518140 RPS12P25398 132 aaKnown RBP26.84■■□□□ 1.89
SLIT3-204ENST00000518140 ASPRV1Q53RT3 343 aa26.84■■□□□ 1.89
SLIT3-204ENST00000518140 RILPL1Q5EBL4 403 aa26.84■■□□□ 1.89
SLIT3-204ENST00000518140 TMEM179Q6ZVK1 233 aa26.84■■□□□ 1.89
SLIT3-204ENST00000518140 MIGA2Q7L4E1 593 aa26.84■■□□□ 1.89
SLIT3-204ENST00000518140 ENGASEQ8NFI3 743 aa26.84■■□□□ 1.89
SLIT3-204ENST00000518140 NUP62CLQ9H1M0 184 aa26.84■■□□□ 1.89
SLIT3-204ENST00000518140 RIOX1Q9H6W3 641 aa26.84■■□□□ 1.89
SLIT3-204ENST00000518140 NYAP2Q9P242 653 aa26.84■■□□□ 1.89
SLIT3-204ENST00000518140 CNOT7Q9UIV1 285 aaKnown RBP26.84■■□□□ 1.89
SLIT3-204ENST00000518140 KCTD1Q719H9 257 aa26.83■■□□□ 1.89
SLIT3-204ENST00000518140 CLIC6Q96NY7 704 aa26.83■■□□□ 1.89
SLIT3-204ENST00000518140 SH3GLB2Q9NR46 395 aa26.83■■□□□ 1.89
SLIT3-204ENST00000518140 BARHL2Q9NY43 387 aa26.83■■□□□ 1.89
SLIT3-204ENST00000518140 HERC5Q9UII4 1024 aaKnown RBP26.83■■□□□ 1.89
SLIT3-204ENST00000518140 SMARCA1P28370 1054 aa26.83■■□□□ 1.89
SLIT3-204ENST00000518140 ICA1Q05084 483 aa26.83■■□□□ 1.89
SLIT3-204ENST00000518140 TBC1D10BQ4KMP7 808 aaPredicted RBP26.83■■□□□ 1.89
SLIT3-204ENST00000518140 FAM83AQ86UY5 434 aa26.83■■□□□ 1.89
SLIT3-204ENST00000518140 CLSTN2Q9H4D0 955 aa26.83■■□□□ 1.89
SLIT3-204ENST00000518140 ARFGEF1Q9Y6D6 1849 aa26.83■■□□□ 1.88
SLIT3-204ENST00000518140 A0A1W2PQ27 194 aa26.82■■□□□ 1.88
SLIT3-204ENST00000518140 A0A1W2PQ64 194 aa26.82■■□□□ 1.88
SLIT3-204ENST00000518140 A0A1W2PQD8 194 aa26.82■■□□□ 1.88
SLIT3-204ENST00000518140 RAD21O60216 631 aa26.82■■□□□ 1.88
SLIT3-204ENST00000518140 RRP36Q96EU6 259 aaKnown RBP26.82■■□□□ 1.88
SLIT3-204ENST00000518140 BRMS1Q9HCU9 246 aa26.82■■□□□ 1.88
SLIT3-204ENST00000518140 DDX19AQ9NUU7 478 aaKnown RBP26.82■■□□□ 1.88
SLIT3-204ENST00000518140 MRVI1Q9Y6F6 885 aa26.82■■□□□ 1.88
SLIT3-204ENST00000518140 LETM1O95202 739 aaPredicted RBP26.81■■□□□ 1.88
SLIT3-204ENST00000518140 SLC16A2P36021 539 aa26.81■■□□□ 1.88
SLIT3-204ENST00000518140 NDUFA8P51970 172 aa26.81■■□□□ 1.88
SLIT3-204ENST00000518140 RASGRP4Q8TDF6 673 aa26.81■■□□□ 1.88
SLIT3-204ENST00000518140 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.81■■□□□ 1.88
SLIT3-204ENST00000518140 PPP6R2O75170 966 aa26.81■■□□□ 1.88
SLIT3-204ENST00000518140 CKAP2LQ8IYA6 745 aa26.81■■□□□ 1.88
SLIT3-204ENST00000518140 MRPS27Q92552 414 aaKnown RBP26.81■■□□□ 1.88
SLIT3-204ENST00000518140 DPF2Q92785 391 aa26.81■■□□□ 1.88
SLIT3-204ENST00000518140 TSPY26PQ9H489 355 aa26.81■■□□□ 1.88
SLIT3-204ENST00000518140 MYH4Q9Y623 1939 aa26.8■■□□□ 1.88
SLIT3-204ENST00000518140 CCDC96Q2M329 555 aa26.8■■□□□ 1.88
SLIT3-204ENST00000518140 CCDC73Q6ZRK6 1079 aa26.8■■□□□ 1.88
SLIT3-204ENST00000518140 PIK3AP1Q6ZUJ8 805 aa26.8■■□□□ 1.88
SLIT3-204ENST00000518140 BLIDQ8IZY5 108 aa26.8■■□□□ 1.88
SLIT3-204ENST00000518140 TNMDQ9H2S6 317 aa26.8■■□□□ 1.88
SLIT3-204ENST00000518140 PCDHA4Q9UN74 947 aa26.8■■□□□ 1.88
SLIT3-204ENST00000518140 FAM160A1Q05DH4 1040 aa26.8■■□□□ 1.88
SLIT3-204ENST00000518140 RASA3Q14644 834 aa26.8■■□□□ 1.88
SLIT3-204ENST00000518140 ADGRF4Q8IZF3 695 aa26.8■■□□□ 1.88
SLIT3-204ENST00000518140 FUCA2Q9BTY2 467 aa26.8■■□□□ 1.88
SLIT3-204ENST00000518140 JMJD4Q9H9V9 463 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms