RNA–Protein interactions for RNA: ENST00000517880.1

CPEB4-203, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-203ENST00000517880 TPM3P06753 285 aa12.31□□□□□ -0.44
CPEB4-203ENST00000517880 SHC4Q6S5L8 630 aa12.31□□□□□ -0.44
CPEB4-203ENST00000517880 OXER1Q8TDS5 423 aa12.31□□□□□ -0.44
CPEB4-203ENST00000517880 CBX8Q9HC52 389 aa12.31□□□□□ -0.44
CPEB4-203ENST00000517880 MTMR4Q9NYA4 1195 aa12.31□□□□□ -0.44
CPEB4-203ENST00000517880 FBXO2Q9UK22 296 aaPredicted RBP12.31□□□□□ -0.44
CPEB4-203ENST00000517880 PCDHA4Q9UN74 947 aa12.31□□□□□ -0.44
CPEB4-203ENST00000517880 ENTPD3O75355 529 aa12.3□□□□□ -0.44
CPEB4-203ENST00000517880 ADCY5O95622 1261 aa12.3□□□□□ -0.44
CPEB4-203ENST00000517880 TTLL1O95922 423 aa12.3□□□□□ -0.44
CPEB4-203ENST00000517880 ASPRV1Q53RT3 343 aa12.3□□□□□ -0.44
CPEB4-203ENST00000517880 MAMSTRQ6ZN01 415 aa12.3□□□□□ -0.44
CPEB4-203ENST00000517880 ZSCAN30Q86W11 494 aa12.3□□□□□ -0.44
CPEB4-203ENST00000517880 BLIDQ8IZY5 108 aa12.3□□□□□ -0.44
CPEB4-203ENST00000517880 STAG2Q8N3U4 1231 aa12.3□□□□□ -0.44
CPEB4-203ENST00000517880 RRP36Q96EU6 259 aaKnown RBP12.3□□□□□ -0.44
CPEB4-203ENST00000517880 CEP95Q96GE4 821 aa12.3□□□□□ -0.44
CPEB4-203ENST00000517880 BPIFA3Q9BQP9 254 aa12.3□□□□□ -0.44
CPEB4-203ENST00000517880 PYM1Q9BRP8 204 aaKnown RBP12.3□□□□□ -0.44
CPEB4-203ENST00000517880 MXD3Q9BW11 206 aa12.3□□□□□ -0.44
CPEB4-203ENST00000517880 DDX4Q9NQI0 724 aaKnown RBP12.3□□□□□ -0.44
CPEB4-203ENST00000517880 BARHL2Q9NY43 387 aa12.3□□□□□ -0.44
CPEB4-203ENST00000517880 PI4KBQ9UBF8 816 aa12.3□□□□□ -0.44
CPEB4-203ENST00000517880 USP25Q9UHP3 1055 aa12.3□□□□□ -0.44
CPEB4-203ENST00000517880 KCNH3Q9ULD8 1083 aa12.3□□□□□ -0.44
CPEB4-203ENST00000517880 PCDHB6Q9Y5E3 794 aa12.3□□□□□ -0.44
CPEB4-203ENST00000517880 GOLGA6L19H0YKK7 550 aa12.29□□□□□ -0.44
CPEB4-203ENST00000517880 PPIP5K2O43314 1243 aa12.29□□□□□ -0.44
CPEB4-203ENST00000517880 MMP14P50281 582 aa12.29□□□□□ -0.44
CPEB4-203ENST00000517880 RBM5P52756 815 aaKnown RBP eCLIP12.29□□□□□ -0.44
CPEB4-203ENST00000517880 NLRP12P59046 1061 aa12.29□□□□□ -0.44
CPEB4-203ENST00000517880 TGFB2P61812 414 aa12.29□□□□□ -0.44
CPEB4-203ENST00000517880 NPY5RQ15761 445 aa12.29□□□□□ -0.44
CPEB4-203ENST00000517880 AOC3Q16853 763 aa12.29□□□□□ -0.44
CPEB4-203ENST00000517880 KIAA0825Q8IV33 1275 aa12.29□□□□□ -0.44
CPEB4-203ENST00000517880 CEP57L1Q8IYX8 460 aa12.29□□□□□ -0.44
CPEB4-203ENST00000517880 SHISA4Q96DD7 197 aa12.29□□□□□ -0.44
CPEB4-203ENST00000517880 COL2A1P02458 1487 aaPredicted RBP12.29□□□□□ -0.44
CPEB4-203ENST00000517880 hCG_1642624A0A1W2PR95 340 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 GOLGA6L6A8MZA4 724 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 C21orf2O43822 256 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 PTMAP06454 111 aaKnown RBP12.28□□□□□ -0.44
CPEB4-203ENST00000517880 SNHG28P0DPA3 235 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 GNA11P29992 359 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 SHMT1P34896 483 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 TTC38Q5R3I4 469 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 KRBA2Q6ZNG9 492 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 PHF12Q96QT6 1004 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 DNAJC25Q9H1X3 360 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 RIOX1Q9H6W3 641 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 KCNQ5Q9NR82 932 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 SEC63Q9UGP8 760 aaKnown RBP12.28□□□□□ -0.44
CPEB4-203ENST00000517880 TUBE1Q9UJT0 475 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 HDAC9Q9UKV0 1011 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 ESYT2A0FGR8 921 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 SMTNL1A8MU46 457 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 BECN2A8MW95 431 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 AKR1B1P15121 316 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 MSNP26038 577 aaKnown RBP12.28□□□□□ -0.44
CPEB4-203ENST00000517880 IQCB1Q15051 598 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 ARL6IP4Q66PJ3 421 aaKnown RBP12.28□□□□□ -0.44
CPEB4-203ENST00000517880 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.28□□□□□ -0.44
CPEB4-203ENST00000517880 METTL16Q86W50 562 aaKnown RBP12.28□□□□□ -0.44
CPEB4-203ENST00000517880 CNNM3Q8NE01 707 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 MKL1Q969V6 931 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 CLIC6Q96NY7 704 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 TRIM34Q9BYJ4 488 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 ZMYND12Q9H0C1 365 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 C6orf50Q9HD87 102 aa12.28□□□□□ -0.44
CPEB4-203ENST00000517880 MYH8P13535 1937 aa12.27□□□□□ -0.44
CPEB4-203ENST00000517880 ZNF646O15015 1829 aaPredicted RBP12.27□□□□□ -0.45
CPEB4-203ENST00000517880 CCDC194A0A1B0GVG4 234 aa12.27□□□□□ -0.45
CPEB4-203ENST00000517880 M0R2N6 131 aa12.27□□□□□ -0.45
CPEB4-203ENST00000517880 STXBP3O00186 592 aa12.27□□□□□ -0.45
CPEB4-203ENST00000517880 LAD1O00515 517 aa12.27□□□□□ -0.45
CPEB4-203ENST00000517880 CYTH3O43739 400 aa12.27□□□□□ -0.45
CPEB4-203ENST00000517880 VIL1P09327 827 aaKnown RBP12.27□□□□□ -0.45
CPEB4-203ENST00000517880 PDHBP11177 359 aa12.27□□□□□ -0.45
CPEB4-203ENST00000517880 KCNA3P22001 575 aa12.27□□□□□ -0.45
CPEB4-203ENST00000517880 CLCN1P35523 988 aa12.27□□□□□ -0.45
CPEB4-203ENST00000517880 TPM4P67936 248 aa12.27□□□□□ -0.45
CPEB4-203ENST00000517880 ATP2C1P98194 919 aaPredicted RBP12.27□□□□□ -0.45
CPEB4-203ENST00000517880 ORC2Q13416 577 aaPredicted RBP12.27□□□□□ -0.45
CPEB4-203ENST00000517880 GPATCH4Q5T3I0 446 aaKnown RBP12.27□□□□□ -0.45
CPEB4-203ENST00000517880 TATDN1Q6P1N9 297 aa12.27□□□□□ -0.45
CPEB4-203ENST00000517880 RSBN1LQ6PCB5 846 aaPredicted RBP12.27□□□□□ -0.45
CPEB4-203ENST00000517880 SARM1Q6SZW1 724 aa12.27□□□□□ -0.45
CPEB4-203ENST00000517880 KRT25Q7Z3Z0 450 aa12.27□□□□□ -0.45
CPEB4-203ENST00000517880 LUZP1Q86V48 1076 aa12.27□□□□□ -0.45
CPEB4-203ENST00000517880 KANSL2Q9H9L4 492 aa12.27□□□□□ -0.45
CPEB4-203ENST00000517880 TMOD2Q9NZR1 351 aa12.27□□□□□ -0.45
CPEB4-203ENST00000517880 NYAP2Q9P242 653 aa12.27□□□□□ -0.45
CPEB4-203ENST00000517880 CLIP2Q9UDT6 1046 aa12.27□□□□□ -0.45
CPEB4-203ENST00000517880 FAM198AQ9UFP1 575 aa12.27□□□□□ -0.45
CPEB4-203ENST00000517880 PSME4Q14997 1843 aa12.26□□□□□ -0.45
CPEB4-203ENST00000517880 ATRNL1Q5VV63 1379 aa12.26□□□□□ -0.45
CPEB4-203ENST00000517880 KIF13BQ9NQT8 1826 aa12.26□□□□□ -0.45
CPEB4-203ENST00000517880 MYO1BO43795 1136 aa12.26□□□□□ -0.45
CPEB4-203ENST00000517880 DPEP1P16444 411 aa12.26□□□□□ -0.45
CPEB4-203ENST00000517880 ATP2B1P20020 1258 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms