RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 LRRCC1Q9C099 1032 aa10.44□□□□□ -0.74
PABPC1-202ENST00000517403 STAP2Q9UGK3 403 aa10.44□□□□□ -0.74
PABPC1-202ENST00000517403 RABGAP1Q9Y3P9 1069 aa10.44□□□□□ -0.74
PABPC1-202ENST00000517403 MCM3APO60318 1980 aa10.43□□□□□ -0.74
PABPC1-202ENST00000517403 IGKV6D-41A0A0C4DH26 115 aa10.43□□□□□ -0.74
PABPC1-202ENST00000517403 HMMRO75330 724 aa10.43□□□□□ -0.74
PABPC1-202ENST00000517403 XRCC5P13010 732 aaKnown RBP10.43□□□□□ -0.74
PABPC1-202ENST00000517403 CYBAP13498 195 aa10.43□□□□□ -0.74
PABPC1-202ENST00000517403 EEF2P13639 858 aaKnown RBP10.43□□□□□ -0.74
PABPC1-202ENST00000517403 ZKSCAN1P17029 563 aaPredicted RBP10.43□□□□□ -0.74
PABPC1-202ENST00000517403 TAL1P17542 331 aaPredicted RBP10.43□□□□□ -0.74
PABPC1-202ENST00000517403 MAPK4P31152 587 aa10.43□□□□□ -0.74
PABPC1-202ENST00000517403 IRX5P78411 483 aaPredicted RBP10.43□□□□□ -0.74
PABPC1-202ENST00000517403 ICA1Q05084 483 aa10.43□□□□□ -0.74
PABPC1-202ENST00000517403 CCDC129Q6ZRS4 1044 aa10.43□□□□□ -0.74
PABPC1-202ENST00000517403 SOCS4Q8WXH5 440 aa10.43□□□□□ -0.74
PABPC1-202ENST00000517403 FGD4Q96M96 766 aa10.43□□□□□ -0.74
PABPC1-202ENST00000517403 GDF15Q99988 308 aa10.43□□□□□ -0.74
PABPC1-202ENST00000517403 MFRPQ9BY79 579 aa10.43□□□□□ -0.74
PABPC1-202ENST00000517403 TMX2Q9Y320 296 aa10.43□□□□□ -0.74
PABPC1-202ENST00000517403 SLC4A4Q9Y6R1 1079 aa10.43□□□□□ -0.74
PABPC1-202ENST00000517403 SMCHD1A6NHR9 2005 aa10.42□□□□□ -0.74
PABPC1-202ENST00000517403 PPP1R37O75864 691 aa10.42□□□□□ -0.74
PABPC1-202ENST00000517403 ERCC3P19447 782 aa10.42□□□□□ -0.74
PABPC1-202ENST00000517403 TMEM132BQ14DG7 1078 aa10.42□□□□□ -0.74
PABPC1-202ENST00000517403 PRAMEF19Q5SWL8 479 aa10.42□□□□□ -0.74
PABPC1-202ENST00000517403 TMEM179Q6ZVK1 233 aa10.42□□□□□ -0.74
PABPC1-202ENST00000517403 ZNF467Q7Z7K2 595 aaPredicted RBP10.42□□□□□ -0.74
PABPC1-202ENST00000517403 KBTBD3Q8NAB2 608 aa10.42□□□□□ -0.74
PABPC1-202ENST00000517403 CRBNQ96SW2 442 aa10.42□□□□□ -0.74
PABPC1-202ENST00000517403 TANGO6Q9C0B7 1094 aa10.42□□□□□ -0.74
PABPC1-202ENST00000517403 VCPKMTQ9H867 229 aa10.42□□□□□ -0.74
PABPC1-202ENST00000517403 HMX1Q9NP08 348 aaPredicted RBP10.42□□□□□ -0.74
PABPC1-202ENST00000517403 INCENPQ9NQS7 918 aa10.42□□□□□ -0.74
PABPC1-202ENST00000517403 ECHDC1Q9NTX5 307 aa10.42□□□□□ -0.74
PABPC1-202ENST00000517403 ZNF214Q9UL59 606 aaPredicted RBP10.42□□□□□ -0.74
PABPC1-202ENST00000517403 DDX49Q9Y6V7 483 aaKnown RBP10.42□□□□□ -0.74
PABPC1-202ENST00000517403 ADCY6O43306 1168 aa10.41□□□□□ -0.74
PABPC1-202ENST00000517403 PRDM1O75626 825 aa10.41□□□□□ -0.74
PABPC1-202ENST00000517403 HOXC6P09630 235 aa10.41□□□□□ -0.74
PABPC1-202ENST00000517403 PTGS1P23219 599 aa10.41□□□□□ -0.74
PABPC1-202ENST00000517403 ADORA2AP29274 412 aa10.41□□□□□ -0.74
PABPC1-202ENST00000517403 RGS2P41220 211 aa10.41□□□□□ -0.74
PABPC1-202ENST00000517403 RRP1P56182 461 aaKnown RBP10.41□□□□□ -0.74
PABPC1-202ENST00000517403 PDAP1Q13442 181 aaKnown RBP10.41□□□□□ -0.74
PABPC1-202ENST00000517403 FAM83BQ5T0W9 1011 aa10.41□□□□□ -0.74
PABPC1-202ENST00000517403 WDR78Q5VTH9 848 aa10.41□□□□□ -0.74
PABPC1-202ENST00000517403 CERS3Q8IU89 383 aa10.41□□□□□ -0.74
PABPC1-202ENST00000517403 GCC1Q96CN9 775 aa10.41□□□□□ -0.74
PABPC1-202ENST00000517403 SPATC1LQ9H0A9 340 aa10.41□□□□□ -0.74
PABPC1-202ENST00000517403 C11orf49Q9H6J7 331 aa10.41□□□□□ -0.74
PABPC1-202ENST00000517403 ATP8A2Q9NTI2 1148 aa10.41□□□□□ -0.74
PABPC1-202ENST00000517403 ADAMTS5Q9UNA0 930 aa10.41□□□□□ -0.74
PABPC1-202ENST00000517403 RIPK3Q9Y572 518 aa10.41□□□□□ -0.74
PABPC1-202ENST00000517403 COL6A3P12111 3177 aa10.4□□□□□ -0.74
PABPC1-202ENST00000517403 SLC15A5A6NIM6 579 aa10.4□□□□□ -0.74
PABPC1-202ENST00000517403 GPAA1O43292 621 aa10.4□□□□□ -0.74
PABPC1-202ENST00000517403 EVI5O60447 810 aa10.4□□□□□ -0.74
PABPC1-202ENST00000517403 PGK2P07205 417 aa10.4□□□□□ -0.74
PABPC1-202ENST00000517403 MAGEA10P43363 369 aaPredicted RBP10.4□□□□□ -0.74
PABPC1-202ENST00000517403 USP14P54578 494 aa10.4□□□□□ -0.74
PABPC1-202ENST00000517403 E2F4Q16254 413 aa10.4□□□□□ -0.74
PABPC1-202ENST00000517403 VPS53Q5VIR6 699 aa10.4□□□□□ -0.74
PABPC1-202ENST00000517403 TMED8Q6PL24 325 aaPredicted RBP10.4□□□□□ -0.74
PABPC1-202ENST00000517403 APPBP2Q92624 585 aa10.4□□□□□ -0.74
PABPC1-202ENST00000517403 HTATIP2Q9BUP3 242 aa10.4□□□□□ -0.74
PABPC1-202ENST00000517403 CABP5Q9NP86 173 aa10.4□□□□□ -0.74
PABPC1-202ENST00000517403 FLOT1O75955 427 aa10.39□□□□□ -0.75
PABPC1-202ENST00000517403 MS4A1P11836 297 aa10.39□□□□□ -0.75
PABPC1-202ENST00000517403 COG2Q14746 738 aa10.39□□□□□ -0.75
PABPC1-202ENST00000517403 SBK1Q52WX2 424 aa10.39□□□□□ -0.75
PABPC1-202ENST00000517403 FAM47AQ5JRC9 791 aa10.39□□□□□ -0.75
PABPC1-202ENST00000517403 NECAB2Q7Z6G3 386 aa10.39□□□□□ -0.75
PABPC1-202ENST00000517403 LRRC47Q8N1G4 583 aaKnown RBP10.39□□□□□ -0.75
PABPC1-202ENST00000517403 ANKLE1Q8NAG6 615 aa10.39□□□□□ -0.75
PABPC1-202ENST00000517403 NBPF3Q9H094 633 aa10.39□□□□□ -0.75
PABPC1-202ENST00000517403 SWAP70Q9UH65 585 aa10.39□□□□□ -0.75
PABPC1-202ENST00000517403 LAMA4Q16363 1823 aa10.39□□□□□ -0.75
PABPC1-202ENST00000517403 PLIN4Q96Q06 1357 aa10.39□□□□□ -0.75
PABPC1-202ENST00000517403 ASTN1O14525 1302 aa10.38□□□□□ -0.75
PABPC1-202ENST00000517403 RNF113AO15541 343 aaKnown RBP10.38□□□□□ -0.75
PABPC1-202ENST00000517403 NMT2O60551 498 aa10.38□□□□□ -0.75
PABPC1-202ENST00000517403 NDUFB10O96000 172 aa10.38□□□□□ -0.75
PABPC1-202ENST00000517403 ZMYM1Q5SVZ6 1142 aa10.38□□□□□ -0.75
PABPC1-202ENST00000517403 GJC2Q5T442 439 aaPredicted RBP10.38□□□□□ -0.75
PABPC1-202ENST00000517403 Q7L0L9 218 aa10.38□□□□□ -0.75
PABPC1-202ENST00000517403 SP7Q8TDD2 431 aaPredicted RBP10.38□□□□□ -0.75
PABPC1-202ENST00000517403 GTF3C2Q8WUA4 911 aaPredicted RBP10.38□□□□□ -0.75
PABPC1-202ENST00000517403 CHMP4CQ96CF2 233 aa10.38□□□□□ -0.75
PABPC1-202ENST00000517403 CEP95Q96GE4 821 aa10.38□□□□□ -0.75
PABPC1-202ENST00000517403 MAML3Q96JK9 1138 aa10.38□□□□□ -0.75
PABPC1-202ENST00000517403 DDX20Q9UHI6 824 aaKnown RBP10.38□□□□□ -0.75
PABPC1-202ENST00000517403 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.38□□□□□ -0.75
PABPC1-202ENST00000517403 LAMA2P24043 3122 aaKnown RBP10.38□□□□□ -0.75
PABPC1-202ENST00000517403 MYADML2A6NDP7 307 aa10.37□□□□□ -0.75
PABPC1-202ENST00000517403 MINDY4BA8MYZ0 360 aa10.37□□□□□ -0.75
PABPC1-202ENST00000517403 VWA5AO00534 786 aa10.37□□□□□ -0.75
PABPC1-202ENST00000517403 WDR46O15213 610 aaKnown RBP10.37□□□□□ -0.75
PABPC1-202ENST00000517403 ATP2B2Q01814 1243 aa10.37□□□□□ -0.75
PABPC1-202ENST00000517403 PLS1Q14651 629 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms